EY680475

Overview
NameEY680475
Unique NameEY680475
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680475 vs. ExPASy Swiss-Prot
Match: RGA_ARATH (DELLA protein RGA OS=Arabidopsis thaliana GN=RGA PE=1 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 3.981e-64
Identity = 131/213 (61.50%), Postives = 158/213 (74.18%), Query Frame = 3
Query:   36 KLAQLAESIHVEFEYRGFVANSLSDLDASMLEIKPSEVDSMAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVAEQEANHNGPVFLDRFTESLHYYSTMFDSLEGSVNNPENHKAMTEAYMGNQICNVVACEGADRVERHETLAQWANEVQFSRIHFRP-HIWTNAYKPPKHVVGPCFAGRKKL*S*GK*WGAPLLEGTPITFIPTSAWK 671
            KLAQLAE+IHVEFEYRGFVANSL+DLDASMLE++PS+ +++AVNSVFELHKLL +PG I+KVL VVK IKP IFTV EQE+NHNGPVFLDRFTESLHYYST+FDSLEG  N+ +  K M+E Y+G QICN+VACEG DRVERHETL+QW N  +F      P H+ +NA+K    ++    +G+          G  +L       I TSAWK
Sbjct:  375 KLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLGRPGGIEKVLGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGVPNSQD--KVMSEVYLGKQICNLVACEGPDRVERHETLSQWGN--RFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESN--GCLMLGWHTRPLITTSAWK 581          
BLAST of EY680475 vs. ExPASy Swiss-Prot
Match: GAIP_CUCMA (DELLA protein GAIP OS=Cucurbita maxima GN=GAIP PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 3.981e-64
Identity = 131/221 (59.28%), Postives = 165/221 (74.66%), Query Frame = 3
Query:   36 KLAQLAESIHVEFEYRGFVANSLSDLDASMLEIKPSEVDSMAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVAEQEANHNGPVFLDRFTESLHYYSTMFDSLEGSVNNPENHKAMTEAYMGNQICNVVACEGADRVERHETLAQWANEVQFSRIHFRP-HIWTNAYKPPKHVVGPCFAGRKKL*S*GK*WGAPLLEGTPITFIPTSAWKTGSQEILS 695
            KL + AE++HVEFEYRGFVANSL+DLDASMLE++PSEV+S+ VNSVFELH+LLA+PGAI+KVLSVVK +KP+I TV EQEANHNGPVF++RFTESLHYYST+FDSLE S N+ +  K M+E Y+G QICNVVACEGADRVERHETL QW    + S   F P H+ +NA+K    ++    +G        +  G+ +L       I TSAWK G+  +++
Sbjct:  364 KLVKFAETLHVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVFELHQLLARPGAIEKVLSVVKQMKPEIVTVVEQEANHNGPVFVERFTESLHYYSTLFDSLECSPNSQD--KMMSEMYLGKQICNVVACEGADRVERHETLTQW--RTRLSSAGFDPIHLGSNAFKQASILLALFGSGEGYRVEENE--GSLMLGWHTRPLIATSAWKPGNNPVVA 578          
BLAST of EY680475 vs. ExPASy Swiss-Prot
Match: GAIPB_CUCMA (DELLA protein GAIP-B OS=Cucurbita maxima GN=GAIPB PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.791e-64
Identity = 132/220 (60.00%), Postives = 162/220 (73.64%), Query Frame = 3
Query:   36 KLAQLAESIHVEFEYRGFVANSLSDLDASMLEIKPSEVDSMAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVAEQEANHNGPVFLDRFTESLHYYSTMFDSLEGSVNNPENHKAMTEAYMGNQICNVVACEGADRVERHETLAQWANEVQFSRIHFRP-HIWTNAYKPPKHVVGPCFAGRKKL*S*GK*WGAPLLEGTPITFIPTSAWKTGSQEIL 692
            KLA+L E+I+VEFEYRGFVANSL+DLDASMLE++PSEV+S+ VNSVFELHKLLA+PGAI+KV+SVVK +KP+I TV EQEANHNGPVF+DRFTESLHYYST+FDSLE S NN +  K M+E Y+G QICNVVACEG+DRVE HETL QW   +  S   F P H+ +NA+K    ++    +G           G+  L       I TSAWK G+  ++
Sbjct:  371 KLAKLVETINVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVFELHKLLARPGAIEKVMSVVKQMKPEIMTVVEQEANHNGPVFMDRFTESLHYYSTLFDSLESSPNNQD--KMMSEMYLGKQICNVVACEGSDRVEWHETLTQWRTRLCSS--GFEPIHLGSNAFKQASMLLALFGSGEGYRVEENN--GSLTLGWHTRPLIVTSAWKLGNNSVV 584          
BLAST of EY680475 vs. ExPASy Swiss-Prot
Match: RGA2_BRACM (DELLA protein RGA2 OS=Brassica campestris GN=RGA2 PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.158e-63
Identity = 122/171 (71.35%), Postives = 146/171 (85.38%), Query Frame = 3
Query:   36 KLAQLAESIHVEFEYRGFVANSLSDLDASMLEIKPSEVDSMAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVAEQEANHNGPVFLDRFTESLHYYSTMFDSLEGSVNNPENHKAMTEAYMGNQICNVVACEGADRVERHETLAQWANEVQFSRIHFRP-HIWTNAYK 545
            KLAQLAE+IHVEFEYRGFVANSL+DLDASMLE++PSE++++AVNSVFELHKLL + G I+KVL VVK IKP IFTV EQE++HNGPVFLDRFTESLHYYST+FDSLEG  ++ +  K M+E Y+G QICN+VACEG DRVERHETL+QWAN  +F    F P H+ +NA+K
Sbjct:  368 KLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSEIEAVAVNSVFELHKLLGRTGGIEKVLGVVKQIKPVIFTVVEQESSHNGPVFLDRFTESLHYYSTLFDSLEGVPSSQD--KVMSEVYLGKQICNLVACEGPDRVERHETLSQWAN--RFGSSGFAPAHLGSNAFK 534          
BLAST of EY680475 vs. ExPASy Swiss-Prot
Match: RGA1_BRACM (DELLA protein RGA1 OS=Brassica campestris GN=RGA1 PE=1 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.513e-63
Identity = 130/213 (61.03%), Postives = 157/213 (73.71%), Query Frame = 3
Query:   36 KLAQLAESIHVEFEYRGFVANSLSDLDASMLEIKPSEVDSMAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVAEQEANHNGPVFLDRFTESLHYYSTMFDSLEGSVNNPENHKAMTEAYMGNQICNVVACEGADRVERHETLAQWANEVQFSRIHFRP-HIWTNAYKPPKHVVGPCFAGRKKL*S*GK*WGAPLLEGTPITFIPTSAWK 671
            KLAQLAE+IHVEFEYRGFVANSL+DLDASMLE++PSE +++AVNSVFELHKLL + G I+KV  VVK IKP IFTV EQE+NHNGPVFLDRFTESLHYYST+FDSLEG+ ++ +  K M+E Y+G QICN+VACEG DRVERHETL+QW+N  +F    F P H+ +NA+K    ++     G           G  +L       I TSAWK
Sbjct:  362 KLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSETEAVAVNSVFELHKLLGRTGGIEKVFGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGAPSSQD--KVMSEVYLGKQICNLVACEGPDRVERHETLSQWSN--RFGSSGFAPAHLGSNAFKQASTLLALFNGGEGYRVEENN--GCLMLSWHTRPLITTSAWK 568          
BLAST of EY680475 vs. ExPASy Swiss-Prot
Match: GAI_ARATH (DELLA protein GAI OS=Arabidopsis thaliana GN=GAI PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.976e-63
Identity = 121/171 (70.76%), Postives = 143/171 (83.63%), Query Frame = 3
Query:   36 KLAQLAESIHVEFEYRGFVANSLSDLDASMLEIKPSEVDSMAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVAEQEANHNGPVFLDRFTESLHYYSTMFDSLEGSVNNPENHKAMTEAYMGNQICNVVACEGADRVERHETLAQWANEVQFSRIHF-RPHIWTNAYK 545
            KLA LAE+IHVEFEYRGFVAN+L+DLDASMLE++PSE++S+AVNSVFELHKLL +PGAIDKVL VV  IKP+IFTV EQE+NHN P+FLDRFTESLHYYST+FDSLEG  +  +  K M+E Y+G QICNVVAC+G DRVERHETL+QW N  +F    F   HI +NA+K
Sbjct:  323 KLAHLAEAIHVEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLGRPGAIDKVLGVVNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEGVPSGQD--KVMSEVYLGKQICNVVACDGPDRVERHETLSQWRN--RFGSAGFAAAHIGSNAFK 489          
BLAST of EY680475 vs. ExPASy Swiss-Prot
Match: GAI1_VITVI (DELLA protein GAI1 OS=Vitis vinifera GN=GAI1 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 2.045e-60
Identity = 133/225 (59.11%), Postives = 161/225 (71.56%), Query Frame = 3
Query:   36 KLAQLAESIHVEFEYRGFVANSLSDLDASMLEIKPSEVDSMAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVAEQEANHNGPVFLDRFTESLHYYSTMFDSLEGSVNNPEN--HKAMTEAYMGNQICNVVACEGADRVERHETLAQWANEVQFSRIHFRP-HIWTNAYKPPKHVVGPCFAGRKKL*S*GK*WGAPLLEGTPITFIPTSAWKTGSQEILSSS 701
            KLAQLAE+IHVEFEYRGFVANSL+DLDASMLE++  E  S+AVNSVFELH LLA+PG I++VLS VK++KPDI T+ EQEANHNGPVFLDRFTESLHYYST+FDSLEG   +P N   K M+E Y+G QICNVVACEG +RVERHETLAQW    +     F P ++ +NA+K    ++   FAG        +  G  +L       I TSAW+  ++  L SS
Sbjct:  367 KLAQLAETIHVEFEYRGFVANSLADLDASMLELRDGE--SVAVNSVFELHSLLARPGGIERVLSAVKDMKPDIVTIVEQEANHNGPVFLDRFTESLHYYSTLFDSLEGCGVSPVNTQDKLMSEVYLGQQICNVVACEGPERVERHETLAQW--RARLGSAGFDPVNLGSNAFKQASMLLA-LFAGGDGY-RVEENNGCLMLGWHTRPLIATSAWQLANKPALPSS 585          
BLAST of EY680475 vs. ExPASy Swiss-Prot
Match: GAI_GOSHI (DELLA protein GAI OS=Gossypium hirsutum GN=GAI PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 8.041e-57
Identity = 110/171 (64.33%), Postives = 136/171 (79.53%), Query Frame = 3
Query:   36 KLAQLAESIHVEFEYRGFVANSLSDLDASMLEIKPSEVDSMAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVAEQEANHNGPVFLDRFTESLHYYSTMFDSLEGSVNNPENHK-AMTEAYMGNQICNVVACEGADRVERHETLAQWANEVQFSRIHFRPHIWTNAYK 545
            KLAQLAE I +EFE+RGFVANSL+DL+  ML+I+P E++ +AVN+VFELH LLA+PG I+KV+S +K +KP I TV EQEANHNGPVFLDRFTE+LHYYST+FDSLEGS   P +   AM+E Y+G QICNVVACEG DRVERHE L QW   ++ + +    H+ +NAYK
Sbjct:  324 KLAQLAERIGIEFEFRGFVANSLADLEPEMLDIRPPEIEVVAVNAVFELHPLLARPGGIEKVVSSIKAMKPKIVTVVEQEANHNGPVFLDRFTEALHYYSTLFDSLEGSGVAPASQDLAMSELYLGRQICNVVACEGMDRVERHEPLTQWRTRMETAGVS-PVHLGSNAYK 493          
BLAST of EY680475 vs. ExPASy Swiss-Prot
Match: GAI_SOLLC (DELLA protein GAI OS=Solanum lycopersicum GN=GAI PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.762e-55
Identity = 114/197 (57.87%), Postives = 148/197 (75.13%), Query Frame = 3
Query:   36 KLAQLAESIHVEFEYRGFVANSLSDLDASMLEIKPSEVDSMAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVAEQEANHNGPVFLDRFTESLHYYSTMFDSLEGSVNN------------PENHK--AMTEAYMGNQICNVVACEGADRVERHETLAQWANEVQFSRIHFRP-HIWTNAYKPPKHVVGPCFAG 581
            KLAQLAE+I VEFE+RGFVANSL+DLDA++L+I+PSE +++A+NSVFELH+LL++PGAI+KVL+ +K I P I T+ EQEANHN  VF+DRF E+LHYYSTMFDSLE S ++            P N++   M+E Y+G QICNVVACEG+DRVERHETL QW   V+ +   F P H+ +NA+K    ++   FAG
Sbjct:  352 KLAQLAETIGVEFEFRGFVANSLADLDATILDIRPSETEAVAINSVFELHRLLSRPGAIEKVLNSIKQINPKIVTLVEQEANHNAGVFIDRFNEALHYYSTMFDSLESSGSSSSASPTGILPQPPVNNQDLVMSEVYLGRQICNVVACEGSDRVERHETLNQW--RVRMNSSGFDPVHLGSNAFKQASMLLA-LFAG 545          
BLAST of EY680475 vs. ExPASy Swiss-Prot
Match: RGL1_ARATH (DELLA protein RGL1 OS=Arabidopsis thaliana GN=RGL1 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.865e-51
Identity = 116/218 (53.21%), Postives = 146/218 (66.97%), Query Frame = 3
Query:   36 KLAQLAESIHVEFEYRGFVANSLSDLDASMLEIKPSEVDSMAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVAEQEANHNGPVFLDRFTESLHYYSTMFDSLEGSVNNPENHKAMTEAYMGNQICNVVACEGADRVERHETLAQWANEVQFSRIHFRP-HIWTNAYKPPKHVVGPCFAGRKKL*S*GK*WGAPLLEGTPITFIPTSAWKTGSQE 686
            KL QLA +I V FE++    N+LSDL   ML+I+P  ++S+AVNSVFELH+LLA PG+IDK LS +K+I+PDI TV EQEANHNG VFLDRFTESLHYYS++FDSLEG    P   + M+E ++G QI N+VACEG DRVERHETL QW N  +F    F+P  I +NAYK    ++   +AG     +  +  G  LL       I TSAW+    E
Sbjct:  302 KLGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRPG-LESVAVNSVFELHRLLAHPGSIDKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGP---PSQDRVMSELFLGRQILNLVACEGEDRVERHETLNQWRN--RFGLGGFKPVSIGSNAYKQASMLLA-LYAGADGY-NVEENEGCLLLGWQTRPLIATSAWRINRVE 511          
The following BLAST results are available for this feature:
BLAST of EY680475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
RGA_ARATH3.981e-6461.50DELLA protein RGA OS=Arabidopsis thaliana GN=RGA P... [more]
GAIP_CUCMA3.981e-6459.28DELLA protein GAIP OS=Cucurbita maxima GN=GAIP PE=... [more]
GAIPB_CUCMA6.791e-6460.00DELLA protein GAIP-B OS=Cucurbita maxima GN=GAIPB ... [more]
RGA2_BRACM1.158e-6371.35DELLA protein RGA2 OS=Brassica campestris GN=RGA2 ... [more]
RGA1_BRACM1.513e-6361.03DELLA protein RGA1 OS=Brassica campestris GN=RGA1 ... [more]
GAI_ARATH1.976e-6370.76DELLA protein GAI OS=Arabidopsis thaliana GN=GAI P... [more]
GAI1_VITVI2.045e-6059.11DELLA protein GAI1 OS=Vitis vinifera GN=GAI1 PE=2 ... [more]
GAI_GOSHI8.041e-5764.33DELLA protein GAI OS=Gossypium hirsutum GN=GAI PE=... [more]
GAI_SOLLC5.762e-5557.87DELLA protein GAI OS=Solanum lycopersicum GN=GAI P... [more]
RGL1_ARATH3.865e-5153.21DELLA protein RGL1 OS=Arabidopsis thaliana GN=RGL1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-011-E02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680475 ID=EY680475; Name=EY680475; organism=Citrus sinensis; type=EST; length=838bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAAATTGGCTCAGCTG
GCTGAAAGCATTCATGTTGAGTTTGAATACAGGGGCTTCGTTGCTAATAG
CTTATCCGATCTTGATGCTTCTATGTTGGAAATCAAACCAAGTGAGGTTG
ACTCAATGGCTGTCAACTCGGTGTTCGAGCTGCATAAGCTGCTGGCCCAA
CCGGGTGCTATTGATAAAGTGCTTTCTGTTGTTAAGAACATTAAGCCGGA
TATTTTCACAGTTGCAGAGCAAGAAGCCAATCATAACGGTCCGGTTTTCT
TGGACCGGTTCACAGAGTCATTGCATTACTACTCGACTATGTTTGACTCG
TTGGAGGGGTCGGTTAACAATCCCGAGAATCATAAGGCTATGACCGAGGC
GTACATGGGGAATCAGATTTGTAATGTGGTGGCCTGTGAAGGAGCGGACC
GGGTCGAGAGACACGAGACGCTGGCTCAATGGGCGAACGAGGTTCAGTTC
AGCCGGATTCATTTCCGGCCCCACATTTGGACAAATGCGTACAAACCACC
TAAGCATGTTGTTGGCCCCTGTTTCGCCGGCCGGAAAAAGTTATAAAGTT
GAGGAAAATAATGGGGGGCCCCACTCCTCGAAGGAACCCCCATCACATTT
ATTCCCACCTCGGCTTGGAAAACCGGCAGCCAGGAGATCCTCTCATCCTC
AGACTCTATCCCGAAGTTTGCGCACCACACAATATAAGACAGCTCTAACC
AATCTGGCTTAGGCGGGCAGCAATCCAGCTCCGGAACAGTGCGGCTTGTC
CCCCTCGCAAACCACTCATCACCACTCCTACACCTCTC
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