CX054029
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 5.810e-62 Identity = 120/158 (75.95%), Postives = 134/158 (84.81%), Query Frame = -3 Query: 357 SFRKNIMAVQK----DNEEGDNK--------AXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 794 SFRKN+M+ QK D EG++K + + VA+VKVSMDGAPYLRK+DLKLYK+YQ+LS+AL KMFSSFTIGN G QGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPW+MFVDSCKR+RIMKGSEAIGLAPRA+EKCKNRS Sbjct: 79 SFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKCKNRS 236
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 3.188e-60 Identity = 117/148 (79.05%), Postives = 126/148 (85.14%), Query Frame = -3 Query: 357 SFRKNIMAVQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAI--GLAPRAVEKCKNRS 794 SFRKN++AVQK E K N +FVKVSMDGAPYLRKVDLK+YKSY+ELSD+LGKMFSSFT GNC SQGMKDFMNESKL DLLN SDYVPTYEDKDGDWMLVGDVPW+MFV+SCKRLRIMKG EAI GLAPRA+ KCKNRS Sbjct: 99 SFRKNMLAVQKSVGEESEK---NSSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGMKDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLAPRAMAKCKNRS 243
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 6.648e-58 Identity = 114/150 (76.00%), Postives = 125/150 (83.33%), Query Frame = -3 Query: 357 SFRKNIMAVQ----KDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 794 S+RKNI+AVQ KD +G + AFVKVSMDGAPYLRKVDLK+YKSY ELS AL KMFSSFTIGNCGS G+ MNESK+ DLLNGS+YVPTYEDKDGDWMLVGDVPW+MFV+SCKRLRIMKGSEAIGLAPRA+EKCKNRS Sbjct: 129 SYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNG-MNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS 277
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2) HSP 1 Score: 220.32 bits (560), Expect = 9.599e-57 Identity = 109/146 (74.66%), Postives = 125/146 (85.62%), Query Frame = -3 Query: 357 SFRKNIMAVQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 794 ++RKN+MA QK E +A VAFVKVSMDGAPYLRKVDLK+Y SY++LSDAL KMFSSFT+G+ G+QGM DFMNESK++DLLN S+YVP+YEDKDGDWMLVGDVPW MFV+SCKRLRIMKGSEAIGLAPRA+EK KNRS Sbjct: 85 NYRKNVMANQKSGEA--EEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS 228
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.033e-55 Identity = 109/153 (71.24%), Postives = 127/153 (83.01%), Query Frame = -3 Query: 357 SFRKNIMAVQKDN---EEGDNKAXXXXXSNVA---FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEK-CKNRS 794 ++RKN+M QK + EE ++ A VKVSMDGAPYLRKVDLK+YKSYQ+LSDAL KMFSSFT+GN G+QGM DFMNESKL++LLN S+YVP+YEDKDGDWMLVGDVPW+MFV+SCKRLRIMKGSEA+GLAPRA+EK CKNRS Sbjct: 91 NYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEKYCKNRS 243
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2) HSP 1 Score: 200.675 bits (509), Expect = 7.871e-51 Identity = 99/147 (67.35%), Postives = 119/147 (80.95%), Query Frame = -3 Query: 357 SFRKNIMAVQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIG-NCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 794 S+RKN+M + + G A AFVKVSMDGAPYLRK+DL++YKSY ELS+AL MFSSFT+G + G +GM DFMNE KL+DL+N DYVP+YEDKDGDWMLVGDVPW MFVD+CKRLR+MKGS+AIGLAPRA+EKCK+R+ Sbjct: 91 SYRKNVMVSCQKSSGGPEAA--------AFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKCKSRA 229
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.006e-46 Identity = 96/154 (62.34%), Postives = 114/154 (74.03%), Query Frame = -3 Query: 357 SFRKNIMAVQKDNEEGDN------KAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 794 SFRKN MA + + G+N +A +VKVSM+GAPYLRK+DLK YKSY ELS AL KMFS FTIG GS G +D +NES+L DLL GS+YV TYEDKD DWMLVGDVPW+MF+ SCK+LRIMK SEAIGLAPR +EKC++R+ Sbjct: 152 SFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVMEKCRSRN 305
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 8.429e-45 Identity = 94/151 (62.25%), Postives = 115/151 (76.16%), Query Frame = -3 Query: 357 SFRKNIMAVQ-KDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL--APRAVEKCKNRS 794 S+RKN +A K+++E D + FVKVSMDGAPYLRKVDL+ Y +Y ELS AL KMF++FT+G CGS G KD ++E+KL DLLNG DYV TYEDKDGDWMLVGDVPW+MF+D CK+L+IMKG +AIGL APRA+EK K R+ Sbjct: 192 SYRKNTLATTCKNSDEVDGRPGS----GALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAAAPRAMEKSKMRA 338
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana GN=IAA8 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.452e-44 Identity = 92/149 (61.74%), Postives = 114/149 (76.51%), Query Frame = -3 Query: 360 SFRKNIMA--VQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNR 794 S+RKN MA K+ +E D K V FVKVSMDGAPYLRKVDL+ Y SYQ+LS AL KMFS FT+G CG G ++ M+E KL DLL+GS++V TYEDKDGDWMLVGDVPW++F ++C++L+IMKGS++IGLAP AVEK KN+ Sbjct: 174 SYRKNTMASSTSKNTDEVDGKPGL----GVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEKSKNK 318
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.590e-43 Identity = 91/150 (60.67%), Postives = 115/150 (76.67%), Query Frame = -3 Query: 357 SFRKNIMAVQKDNEEG--DNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 794 S+RKN MA+ + +G D +A S +VKVSMDGAPYLRKVDLK+YK+Y+ELS AL KMFS FT+G+ S G +D +++ +L+DL NG++ V TYEDKD DWMLVGDVPW MF DSC+RLRIMKGS+A+GLAPRA +K KNR+ Sbjct: 117 SYRKNTMAMSQPALKGKDDGEAKQAPASGCLYVKVSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAVGLAPRATDKSKNRN 266 The following BLAST results are available for this feature:
BLAST of CX054029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CX054029 ID=CX054029; Name=CX054029; organism=Citrus sinensis; type=EST; length=796bpback to top |