CX053958

Overview
NameCX053958
Unique NameCX053958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length675
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX053958 vs. ExPASy Swiss-Prot
Match: EF2_BETVU (Elongation factor 2 OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 434.876 bits (1117), Expect = 1.863e-121
Identity = 211/224 (94.20%), Postives = 218/224 (97.32%), Query Frame = 3 
Query:    3 HIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQK 674
            HIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVL++S RTVMSKSPNKHNRLYMEARP+EEGLAEAID+GRIGPRDDPK RSKIL+EE+GWDKDLAKKIWCFGPET GPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLH DAIHRGGGQ+IPTARRV YASQLTAKPRLLEPVYLVEIQAPE ALGGIYSVLNQK
Sbjct:  528 HIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLDRSVRTVMSKSPNKHNRLYMEARPMEEGLAEAIDEGRIGPRDDPKNRSKILAEEYGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHTDAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPENALGGIYSVLNQK 751
[Close]
BLAST of CX053958 vs. ExPASy Swiss-Prot
Match: EF2_CHLKE (Elongation factor 2 OS=Chlorella kessleri PE=2 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 1.809e-108
Identity = 191/224 (85.27%), Postives = 207/224 (92.41%), Query Frame = 3 
Query:    3 HIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQK 674
            HIIAGAGELHLEICLKDLQDDFMGGAEI  S+PVVSFRETV+  S   VMSKSPNKHNRLYM+ARP+E+GLAEAID+G+IGPRDDPKVRSKILSEEFGWDK+LAKKI  FGP+T GPNMV D+ KGVQYLNEIKDSVVA FQWASKEG LAEENMRGI FEVCDVVLHADAIHRGGGQ+IPTARR +YA+QLTA+PRLLEPVYLVEIQ PEQA+GG+YSVLNQK
Sbjct:  530 HIIAGAGELHLEICLKDLQDDFMGGAEIRVSEPVVSFRETVIGTSDHVVMSKSPNKHNRLYMQARPMEDGLAEAIDEGKIGPRDDPKVRSKILSEEFGWDKELAKKILAFGPDTTGPNMVTDITKGVQYLNEIKDSVVAAFQWASKEGVLAEENMRGIVFEVCDVVLHADAIHRGGGQIIPTARRSMYAAQLTAQPRLLEPVYLVEIQCPEQAMGGVYSVLNQK 753
[Close]
BLAST of CX053958 vs. ExPASy Swiss-Prot
Match: EF2_RAT (Elongation factor 2 OS=Rattus norvegicus GN=Eef2 PE=1 SV=4)

HSP 1 Score: 317.39 bits (812), Expect = 4.335e-86
Identity = 155/224 (69.20%), Postives = 184/224 (82.14%), Query Frame = 3 
Query:    3 HIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQK 674
            HIIAGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+  GPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+YLVEIQ PEQ +GGIY VLN+K
Sbjct:  544 HIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRK 766
[Close]
BLAST of CX053958 vs. ExPASy Swiss-Prot
Match: EF2_MOUSE (Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 SV=2)

HSP 1 Score: 317.39 bits (812), Expect = 4.335e-86
Identity = 155/224 (69.20%), Postives = 184/224 (82.14%), Query Frame = 3 
Query:    3 HIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQK 674
            HIIAGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+  GPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+YLVEIQ PEQ +GGIY VLN+K
Sbjct:  544 HIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRK 766
[Close]
BLAST of CX053958 vs. ExPASy Swiss-Prot
Match: EF2_MESAU (Elongation factor 2 OS=Mesocricetus auratus GN=EEF2 PE=2 SV=3)

HSP 1 Score: 317.39 bits (812), Expect = 4.335e-86
Identity = 155/224 (69.20%), Postives = 184/224 (82.14%), Query Frame = 3 
Query:    3 HIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQK 674
            HIIAGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+  GPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+YLVEIQ PEQ +GGIY VLN+K
Sbjct:  544 HIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRK 766
[Close]
BLAST of CX053958 vs. ExPASy Swiss-Prot
Match: EF2_PONAB (Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 SV=3)

HSP 1 Score: 316.62 bits (810), Expect = 7.394e-86
Identity = 155/224 (69.20%), Postives = 184/224 (82.14%), Query Frame = 3 
Query:    3 HIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQK 674
            HIIAGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+  GPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+YLVEIQ PEQ +GGIY VLN+K
Sbjct:  544 HIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRK 766
[Close]
BLAST of CX053958 vs. ExPASy Swiss-Prot
Match: EF2_HUMAN (Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 SV=4)

HSP 1 Score: 316.62 bits (810), Expect = 7.394e-86
Identity = 155/224 (69.20%), Postives = 184/224 (82.14%), Query Frame = 3 
Query:    3 HIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQK 674
            HIIAGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+  GPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+YLVEIQ PEQ +GGIY VLN+K
Sbjct:  544 HIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRK 766
[Close]
BLAST of CX053958 vs. ExPASy Swiss-Prot
Match: EF2_CALJA (Elongation factor 2 OS=Callithrix jacchus GN=EEF2 PE=2 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 7.394e-86
Identity = 155/224 (69.20%), Postives = 184/224 (82.14%), Query Frame = 3 
Query:    3 HIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQK 674
            HIIAGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+  GPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+YLVEIQ PEQ +GGIY VLN+K
Sbjct:  544 HIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRK 766
[Close]
BLAST of CX053958 vs. ExPASy Swiss-Prot
Match: EF2_BOVIN (Elongation factor 2 OS=Bos taurus GN=EEF2 PE=2 SV=3)

HSP 1 Score: 316.62 bits (810), Expect = 7.394e-86
Identity = 155/224 (69.20%), Postives = 184/224 (82.14%), Query Frame = 3 
Query:    3 HIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQK 674
            HIIAGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+  GPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+YLVEIQ PEQ +GGIY VLN+K
Sbjct:  544 HIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRK 766
[Close]
BLAST of CX053958 vs. ExPASy Swiss-Prot
Match: EF2_CRIGR (Elongation factor 2 OS=Cricetulus griseus GN=EEF2 PE=3 SV=3)

HSP 1 Score: 314.309 bits (804), Expect = 3.670e-85
Identity = 154/224 (68.75%), Postives = 183/224 (81.70%), Query Frame = 3 
Query:    3 HIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQK 674
            HIIAGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+  GPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EENMRG+ F+V DV LHADAIHR GGQ+IPTARR +YAS LTA+PRL+EP+YLVEIQ PEQ +GGIY VLN+K
Sbjct:  544 HIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRRGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRK 766
The following BLAST results are available for this feature:
BLAST of CX053958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
EF2_BETVU1.863e-12194.20Elongation factor 2 OS=Beta vulgaris PE=2 SV=1[more]
EF2_CHLKE1.809e-10885.27Elongation factor 2 OS=Chlorella kessleri PE=2 SV=... [more]
EF2_RAT4.335e-8669.20Elongation factor 2 OS=Rattus norvegicus GN=Eef2 P... [more]
EF2_MOUSE4.335e-8669.20Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 S... [more]
EF2_MESAU4.335e-8669.20Elongation factor 2 OS=Mesocricetus auratus GN=EEF... [more]
EF2_PONAB7.394e-8669.20Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 S... [more]
EF2_HUMAN7.394e-8669.20Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 S... [more]
EF2_CALJA7.394e-8669.20Elongation factor 2 OS=Callithrix jacchus GN=EEF2 ... [more]
EF2_BOVIN7.394e-8669.20Elongation factor 2 OS=Bos taurus GN=EEF2 PE=2 SV=... [more]
EF2_CRIGR3.670e-8568.75Elongation factor 2 OS=Cricetulus griseus GN=EEF2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_9D02_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-9D02-G4-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX053958 ID=CX053958; Name=CX053958; organism=Citrus sinensis; type=EST; length=675bp
AGCATATCATTGCCGGTGCAGGAGAACTCCATCTTGAGATCTGTTTGAAG
GATTTGCAGGATGATTTCATGGGTGGTGCTGAGATTATCAAATCTGATCC
TGTTGTGTCCTTCCGTGAGACTGTCCTTGAGAAGTCCTGCCGTACTGTTA
TGAGCAAGTCTCCAAACAAACACAATCGTCTCTATATGGAAGCCCGGCCA
TTGGAGGAAGGTCTTGCTGAGGCAATTGATGATGGTCGTATTGGTCCAAG
GGATGATCCTAAGGTTCGTTCTAAGATTCTGTCTGAGGAATTTGGTTGGG
ACAAGGATCTTGCCAAGAAAATCTGGTGTTTTGGTCCTGAGACCATTGGT
CCTAACATGGTTGTGGATATGTGCAAGGGAGTTCAGTACTTGAATGAAAT
TAAGGATTCAGTTGTTGCTGGGTTCCAGTGGGCATCAAAGGAAGGTGCAT
TGGCTGAAGAAAACATGAGGGGCATTTGCTTTGAAGTTTGTGATGTGGTT
CTTCATGCCGATGCTATCCACAGAGGTGGTGGCCAGGTTATTCCAACTGC
TAGAAGGGTCATTTATGCATCCCAGCTTACAGCCAAACCAAGGCTTCTTG
AGCCTGTCTACTTGGTGGAAATCCAAGCTCCTGAACAGGCACTTGGTGGT
ATTTACAGTGTTCTTAACCAGAAAC
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