EY693218

Overview
NameEY693218
Unique NameEY693218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length323
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS2_CITSI (Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.059e-24
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 167
            MSSACVLFILDEMRKKS EEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA
Sbjct:  337 MSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 391          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHSY_PETCR (Chalcone synthase OS=Petroselinum crispum GN=CHS PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.517e-22
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 158
            MSSACVLFILDEMRKKS EE KATTGEGLDWGVLFGFGPGLTVETVVLHSVP
Sbjct:  342 MSSACVLFILDEMRKKSIEEGKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 393          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS4_SORBI (Chalcone synthase 4 OS=Sorghum bicolor GN=CHS4 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.287e-22
Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 161
            MSSACVLFILDEMRK+SAE+ +ATTGEGLDWGVLFGFGPGLTVETVVLHSVPI
Sbjct:  341 MSSACVLFILDEMRKRSAEDGQATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 393          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS2_MAIZE (Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.287e-22
Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 161
            MSSACVLFILDEMRK+SAE+ +ATTGEGLDWGVLFGFGPGLTVETVVLHSVPI
Sbjct:  341 MSSACVLFILDEMRKRSAEDGQATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 393          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSJ (Chalcone synthase OS=Oryza sativa subsp. japonica GN=CHS PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.293e-22
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 167
            MSSACVLFILDEMRK+SAE+  ATTGEG+DWGVLFGFGPGLTVETVVLHSVPI A
Sbjct:  340 MSSACVLFILDEMRKRSAEDGHATTGEGMDWGVLFGFGPGLTVETVVLHSVPITA 394          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSI (Chalcone synthase OS=Oryza sativa subsp. indica GN=CHS PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.293e-22
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 167
            MSSACVLFILDEMRK+SAE+  ATTGEG+DWGVLFGFGPGLTVETVVLHSVPI A
Sbjct:  340 MSSACVLFILDEMRKRSAEDGHATTGEGMDWGVLFGFGPGLTVETVVLHSVPITA 394          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS7_SORBI (Chalcone synthase 7 OS=Sorghum bicolor GN=CHS7 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.293e-22
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 161
            MSSACVLFILDEMRK+SAEE +ATTGEG DWGVLFGFGPGLTVETVVLHSVPI
Sbjct:  341 MSSACVLFILDEMRKRSAEEGQATTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS2_RUTGR (Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.607e-22
Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 167
            MSSACVLFILDEMRKK AEE +ATTGEGLDWGVLFGFGPGLTVETVVL SVPI A
Sbjct:  339 MSSACVLFILDEMRKKCAEEGRATTGEGLDWGVLFGFGPGLTVETVVLRSVPINA 393          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS2_DAUCA (Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.607e-22
Identity = 49/52 (94.23%), Postives = 50/52 (96.15%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 158
            MSSACVLFILDEMRKKS EE KATTG+GLDWGVLFGFGPGLTVETVVLHSVP
Sbjct:  341 MSSACVLFILDEMRKKSIEEGKATTGDGLDWGVLFGFGPGLTVETVVLHSVP 392          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS1_RUTGR (Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.607e-22
Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 167
            MSSACVLFILDEMRK  AEE +ATTGEGLDWGVLFGFGPGLTVETVVL SVPIKA
Sbjct:  339 MSSACVLFILDEMRKNCAEEGRATTGEGLDWGVLFGFGPGLTVETVVLRSVPIKA 393          
The following BLAST results are available for this feature:
BLAST of EY693218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
CHS2_CITSI2.059e-2498.18Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=... [more]
CHSY_PETCR2.517e-2296.15Chalcone synthase OS=Petroselinum crispum GN=CHS P... [more]
CHS4_SORBI3.287e-2292.45Chalcone synthase 4 OS=Sorghum bicolor GN=CHS4 PE=... [more]
CHS2_MAIZE3.287e-2292.45Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1[more]
CHSY_ORYSJ4.293e-2289.09Chalcone synthase OS=Oryza sativa subsp. japonica ... [more]
CHSY_ORYSI4.293e-2289.09Chalcone synthase OS=Oryza sativa subsp. indica GN... [more]
CHS7_SORBI4.293e-2292.45Chalcone synthase 7 OS=Sorghum bicolor GN=CHS7 PE=... [more]
CHS2_RUTGR5.607e-2290.91Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=... [more]
CHS2_DAUCA5.607e-2294.23Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 ... [more]
CHS1_RUTGR5.607e-2290.91Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-C02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693218 ID=EY693218; Name=EY693218; organism=Citrus sinensis; type=EST; length=323bp
ACATGTCAAGCGCTTGTGTCCTGTTCATCCTTGACGAGATGAGAAAGAAG
TCTGCTGAGGAAGCGAAAGCCACCACCGGCGAAGGGCTAGATTGGGGTGT
GCTGTTCGGGTTCGGGCCGGGGCTCACCGTCGAGACCGTTGTGCTGCACA
GTGTCCCCATCAAAGCTTGAAGTGAGAACTCCATCAGTATGTTTAGTAGT
TCAGTAACTTTATGTTGTATGCTTTCACTCTTGAATTATTGGTTGATCGT
GTGAAGGTTTAGTTTTGTCAATTGAATTTAAGGCATCGTACCTTTTCTCT
TAAAAAAAAAAAAAAAAAAAAAA
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