CX053915
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX053915 vs. ExPASy Swiss-Prot
Match: ARP5_ARATH (Actin-related protein 5 OS=Arabidopsis thaliana GN=ARP5 PE=1 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 4.427e-71 Identity = 146/282 (51.77%), Postives = 182/282 (64.54%), Query Frame = 1 Query: 1 EDLKMEHCYIAPDYFSEAQLFQKGTKEAEHKTRCWQLPWVXXXXXXXXXXXXXXXXXXXXXXQGQRLREMAEAKRSSRINELENQIHGXXXXXXXXXXXXXNDIAAFLSDTGYVSRQEIESTLVKLTQSLRKAKGERKVEQAELEKT-DASMNEKYPLIHIPDNMLSLEQLKEKRRQIFLKTTTEGRQRAKQKRVXXXXXXXXXXXXXXXXXXXXPELYVEQMRAKYKELFEKIDQRKRLKXXXXXXXXXXXXXXXXXXERLNAAQRERMRLLTTAAFDRGK 843 EDLK+EHCYIAPDY SE +LFQ+G KEAE KT WQLPW+ QGQRLREMAEAKR S+IN++ENQ+ +DI FLSDTGY SRQE+EST+ K+TQSLRKA+GE K E AE E+ D+ NEKYPL+++PD++L+ EQLK+K+RQ+FLKTT EGR RA+QKR PE Y+E+++A+YKE+ E+++Q+KRLK ERL+AAQRERMRLLTTAAFDRGK Sbjct: 97 EDLKLEHCYIAPDYASEIRLFQEGRKEAEEKTSYWQLPWIPPPTEVPPSEEEIARKAAIREKQGQRLREMAEAKRVSKINDMENQLISLRFLLKQVDQVEEDDIPTFLSDTGYASRQELESTITKVTQSLRKARGEPKNEPAEYEENPDSLNNEKYPLMNVPDDILTPEQLKDKKRQMFLKTTAEGRLRARQKRNEEELEKEKRNQLEEERRRENPESYLEELQAQYKEVLERVEQKKRLK-TNGSSNGNNKSGGIGRGERLSAAQRERMRLLTTAAFDRGK 377
BLAST of CX053915 vs. ExPASy Swiss-Prot
Match: ARP5_ORYSJ (Actin-related protein 5 OS=Oryza sativa subsp. japonica GN=ARP5 PE=3 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 2.279e-59 Identity = 132/282 (46.81%), Postives = 164/282 (58.16%), Query Frame = 1 Query: 1 EDLKMEHCYIAPDYFSEAQLFQKGTKEAEHKTRCWQLPWVXXXXXXXXXXXXXXXXXXXXXXQGQRLREMAEAKRSSRINELENQIHGXXXXXXXXXXXXXNDIAAFLSDTGYVSRQEIESTLVKLTQSLRKAKGERKVEQAELEKTDASMNEKYPLIHIPDNMLSLEQLKEKRRQIFLKTTTEGRQRAKQKRVXXXXXXXXXXXXXXXXXXXXPELYVEQMRAKYKELFEKIDQRKRLK-XXXXXXXXXXXXXXXXXXERLNAAQRERMRLLTTAAFDRGK 843 E+LK EHCY+A DY SE Q+F+ +EAE KTR WQLPWV GQRLR+MA AKRS +I ELE Q+ + A L +GY+S+QEI+S ++K TQSLRKAKGE + EK DAS +KYPL+ +PD L+ EQLKEK++QI LKTTTEGR RAKQ+R PELY+E++RA+Y EL +++DQRKR K ERLNAAQ+ERMRLLT+AAFDRGK Sbjct: 91 EELKKEHCYVALDYMSELQIFKNNKEEAEEKTRYWQLPWVPPPVEEPPSEEELARKAALKEKAGQRLRDMAAAKRSQKIAELEKQLSYLEELMEQLDGAEEEEATAILGRSGYLSQQEIKSAILKATQSLRKAKGESNGNE---EKADASGVDKYPLVSVPDETLTPEQLKEKKKQILLKTTTEGRMRAKQRRA---EEEALREKQEEERRLENPELYLEELRARYSELSDRVDQRKRQKLNGGKTNGNHNSSGGVGRGERLNAAQKERMRLLTSAAFDRGK 366
BLAST of CX053915 vs. ExPASy Swiss-Prot
Match: ARP5_ORYSI (Actin-related protein 5 OS=Oryza sativa subsp. indica GN=ARP5 PE=2 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 2.279e-59 Identity = 132/282 (46.81%), Postives = 164/282 (58.16%), Query Frame = 1 Query: 1 EDLKMEHCYIAPDYFSEAQLFQKGTKEAEHKTRCWQLPWVXXXXXXXXXXXXXXXXXXXXXXQGQRLREMAEAKRSSRINELENQIHGXXXXXXXXXXXXXNDIAAFLSDTGYVSRQEIESTLVKLTQSLRKAKGERKVEQAELEKTDASMNEKYPLIHIPDNMLSLEQLKEKRRQIFLKTTTEGRQRAKQKRVXXXXXXXXXXXXXXXXXXXXPELYVEQMRAKYKELFEKIDQRKRLK-XXXXXXXXXXXXXXXXXXERLNAAQRERMRLLTTAAFDRGK 843 E+LK EHCY+A DY SE Q+F+ +EAE KTR WQLPWV GQRLR+MA AKRS +I ELE Q+ + A L +GY+S+QEI+S ++K TQSLRKAKGE + EK DAS +KYPL+ +PD L+ EQLKEK++QI LKTTTEGR RAKQ+R PELY+E++RA+Y EL +++DQRKR K ERLNAAQ+ERMRLLT+AAFDRGK Sbjct: 91 EELKKEHCYVALDYMSELQIFKNNKEEAEEKTRYWQLPWVPPPVEEPPSEEELARKAALKEKAGQRLRDMAAAKRSQKIAELEKQLSYLEELMEQLDGAEEEEATAILGRSGYLSQQEIKSAILKATQSLRKAKGESNGNE---EKADASGVDKYPLVSVPDETLTPEQLKEKKKQILLKTTTEGRMRAKQRRA---EEEALREKQEEERRLENPELYLEELRARYSELSDRVDQRKRQKLNGGKTNGNHNSSGGVGRGERLNAAQKERMRLLTSAAFDRGK 366 The following BLAST results are available for this feature:
BLAST of CX053915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX053915 ID=CX053915; Name=CX053915; organism=Citrus sinensis; type=EST; length=844bpback to top |