CX053912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX053912 vs. ExPASy Swiss-Prot
Match: PATL5_ARATH (Patellin-5 OS=Arabidopsis thaliana GN=PATL5 PE=1 SV=2) HSP 1 Score: 254.988 bits (650), Expect = 3.847e-67 Identity = 127/196 (64.80%), Postives = 152/196 (77.55%), Query Frame = -1 Query: 263 DLKNSPGPAKWELRQATKQALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTRSKFVFAGPSKSAETLLRYIAAEQLPVKYGGLSK-----VGEFAATDAVTEITVKPAAKHTVEFPVTEECHLTWEVRVVGWEVSYGAEFVPSTEGSYTVIIQKAKKLASNAEQPVVCDSFKIVEPGKVVLTIDNPTS 835 DLKNSPGP K ELR ATKQAL LLQDNYPEFV+KQ+FINVPWWYLA R+ISPF++QR++SK VFAGPS+SAETLL+YI+ E +PV+YGGLS +F D TEITVKP K TVE V E+C + WE+RVVGWEVSYGAEFVP + YTVIIQK +K+ + E VV SFK+ E G+++LT+DNPTS Sbjct: 457 DLKNSPGPGKTELRLATKQALHLLQDNYPEFVSKQIFINVPWWYLAFYRIISPFMSQRSKSKLVFAGPSRSAETLLKYISPEHVPVQYGGLSVDNCECNSDFTHDDIATEITVKPTTKQTVEIIVYEKCTIVWEIRVVGWEVSYGAEFVPENKEGYTVIIQKPRKMTAKNEL-VVSHSFKVGEVGRILLTVDNPTS 651
BLAST of CX053912 vs. ExPASy Swiss-Prot
Match: PATL3_ARATH (Patellin-3 OS=Arabidopsis thaliana GN=PATL3 PE=1 SV=2) HSP 1 Score: 241.121 bits (614), Expect = 5.749e-63 Identity = 118/196 (60.20%), Postives = 149/196 (76.02%), Query Frame = -1 Query: 263 DLKNSPGPAKWELRQATKQALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTRSKFVFAGPSKSAETLLRYIAAEQLPVKYGGLSK-----VGEFAATDAVTEITVKPAAKHTVEFPVTEECHLTWEVRVVGWEVSYGAEFVPSTEGSYTVIIQKAKKLASNAEQPVVCDSFKIVEPGKVVLTIDNPTS 835 D+KNSPG K ELR ATKQA++LLQDNYPEFV KQ FINVPWWYL +I PF+T R++SK VFAGPS+SAETL +YI+ EQ+PV+YGGLS +F+ D+ +EITVKP K TVE + E+C L WE+RV GWEVSY AEFVP + +YTV+IQK +K+ +++PV+ SFK+ E GKV+LT+DNPTS Sbjct: 282 DMKNSPGLGKKELRSATKQAVELLQDNYPEFVFKQAFINVPWWYLVFYTVIGPFMTPRSKSKLVFAGPSRSAETLFKYISPEQVPVQYGGLSVDPCDCNPDFSLEDSASEITVKPGTKQTVEIIIYEKCELVWEIRVTGWEVSYKAEFVPEEKDAYTVVIQKPRKMRP-SDEPVLTHSFKVNELGKVLLTVDNPTS 476
BLAST of CX053912 vs. ExPASy Swiss-Prot
Match: PATL1_ARATH (Patellin-1 OS=Arabidopsis thaliana GN=PATL1 PE=1 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 6.807e-56 Identity = 105/192 (54.69%), Postives = 141/192 (73.44%), Query Frame = -1 Query: 263 DLKNSPGPAKWELRQATKQALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQ-RTRSKFVFAGPSKSAETLLRYIAAEQLPVKYGGLSKVGEFAATDAVTEITVKPAAKHTVEFPVTEECHLTWEVRVVGWEVSYGAEFVPSTEGSYTVIIQKAKKLASNAEQPVVCDSFKIVEPGKVVLTIDNPTS 835 D +N+PG K L Q ++A++ +DNYPEF AK++FINVPWWY+ + +T RTRSK V AGPSKSA+T+ +YIA EQ+PVKYGGLSK + +TE VKPAA +T+E P +E C L+WE+RV+G +VSYGA+F P+TEGSY VI+ K +K+ S ++PV+ DSFK+ EPGK+V+TIDN TS Sbjct: 372 DFRNAPGLGKRALWQFIRRAVKQFEDNYPEFAAKELFINVPWWYIPYYKTFGSIITSPRTRSKMVLAGPSKSADTIFKYIAPEQVPVKYGGLSKDTPLTE-ETITEAIVKPAANYTIELPASEACTLSWELRVLGADVSYGAQFEPTTEGSYAVIVSKTRKIGS-TDEPVITDSFKVGEPGKIVITIDNQTS 561
BLAST of CX053912 vs. ExPASy Swiss-Prot
Match: PATL2_ARATH (Patellin-2 OS=Arabidopsis thaliana GN=PATL2 PE=1 SV=2) HSP 1 Score: 207.994 bits (528), Expect = 5.393e-53 Identity = 102/191 (53.40%), Postives = 135/191 (70.68%), Query Frame = -1 Query: 266 DLKNSPGPAKWELRQATKQALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQ-RTRSKFVFAGPSKSAETLLRYIAAEQLPVKYGGLSKVGEFAATDAVTEITVKPAAKHTVEFPVTEECHLTWEVRVVGWEVSYGAEFVPSTEGSYTVIIQKAKKLASNAEQPVVCDSFKIVEPGKVVLTIDNPT 835 D +N+PG + L Q K+A++ +DNYPEFVAK++FINVPWWY+ + +T RTRSK V +GPSKSAET+ +Y+A E +PVKYGGLSK F D VTE VK +K+T++ P TE L+WE+RV+G +VSYGA+F PS E SYTVI+ K +K+ ++PV+ DSFK E GKVV+TIDN T Sbjct: 480 DFRNAPGLGQRALWQFIKRAVKQFEDNYPEFVAKELFINVPWWYIPYYKTFGSIITSPRTRSKMVLSGPSKSAETIFKYVAPEVVPVKYGGLSKDSPFTVEDGVTEAVVKSTSKYTIDLPATEGSTLSWELRVLGADVSYGAQFEPSNEASYTVIVSKNRKVGL-TDEPVITDSFKASEAGKVVITIDNQT 669
BLAST of CX053912 vs. ExPASy Swiss-Prot
Match: PATL4_ARATH (Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2) HSP 1 Score: 200.675 bits (509), Expect = 8.611e-51 Identity = 98/190 (51.58%), Postives = 140/190 (73.68%), Query Frame = -1 Query: 272 DLKNSPGPAKWELRQATKQALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTRSKFVFAGPSKSAETLLRYIAAEQLPVKYGGLSKVGEFA-ATDAVTEITVKPAAKHTVEFPVTE-ECHLTWEVRVVGWEVSYGAEFVPSTEGSYTVIIQKAKKLASNAEQPVVCDSFKIVEPGKVVLTIDN 835 DLKN+PG ++ E+ K+ ++ LQDNYPEFV++ +FINVP+W+ A+ ++SPFLTQRT+SKFV A P+K ETLL+YI A++LPV+YGG V + + + V+E+ VKP + T+E P E E L W++ V+GWEV+Y EFVP+ EG+YTVI+QK KK+ +N E P + +SFK + GK+VLT+DN Sbjct: 333 DLKNAPGVSRTEIWVGIKKVIETLQDNYPEFVSRNIFINVPFWFYAMRAVLSPFLTQRTKSKFVVARPAKVRETLLKYIPADELPVQYGGFKTVDDTEFSNETVSEVVVKPGSSETIEIPAPETEGTLVWDIAVLGWEVNYKEEFVPTEEGAYTVIVQKVKKMGAN-EGP-IRNSFKNSQAGKIVLTVDN 520
BLAST of CX053912 vs. ExPASy Swiss-Prot
Match: PATL6_ARATH (Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.378e-40 Identity = 86/194 (44.33%), Postives = 124/194 (63.92%), Query Frame = -1 Query: 263 DLKNSPGPAKWELRQATKQALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTRSKFVFAGPSKSAETLLRYIAAEQLPVKYGGLSKV--GEFAATDAVTEITVKPAAKHTVEFPVTE-ECHLTWEVRVVGWEVSYGAEFVPSTEGSYTVIIQKAKKLASNAEQPVVCDSFKIVEPGKVVLTIDNPTS 835 DLK+ P K ELR A+ Q L L QDNYPE VA ++FINVPW++ + M SPFLTQRT+SKFV + +AETL ++I E +PV+YGGLS+ + +E ++K K ++ E +TW++ V GW++ Y AEFVP+ E SY ++++K KK+ + E VC+SF VE GK++L++DN S Sbjct: 202 DLKDMP---KRELRVASNQILSLFQDNYPELVATKIFINVPWYFSVIYSMFSPFLTQRTKSKFVMSKEGNAAETLYKFIRPEDIPVQYGGLSRPTDSQNGPPKPASEFSIKGGEKVNIQIEGIEGGATITWDIVVGGWDLEYSAEFVPNAEESYAIVVEKPKKMKATDE--AVCNSFTTVEAGKLILSVDNTLS 390 The following BLAST results are available for this feature:
BLAST of CX053912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX053912 ID=CX053912; Name=CX053912; organism=Citrus sinensis; type=EST; length=835bpback to top |