DR403653

Overview
NameDR403653
Unique NameDR403653
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length502
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR403653 vs. ExPASy Swiss-Prot
Match: QCR9_SOLTU (Cytochrome b-c1 complex subunit 9 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.405e-22
Identity = 48/72 (66.67%), Postives = 57/72 (79.17%), Query Frame = 2 
Query:  101 MEYTTKRSQGGLLEGLYRVIMRRNSIYVTFIIAGAFAGERAVDYGVRKIWEHNNVGKRYEDIPALGQRQSEE 316
            ME   +RS GG+LEG YR++MRR  +YVTF+IAGA  GERAVDYGV+ +WE NNVGKRYEDI  LGQR  +E
Sbjct:    1 MESAARRSGGGVLEGFYRLVMRRTPVYVTFVIAGALLGERAVDYGVKTLWEKNNVGKRYEDISVLGQRPVDE 72
The following BLAST results are available for this feature:
BLAST of DR403653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
QCR9_SOLTU1.405e-2266.67Cytochrome b-c1 complex subunit 9 OS=Solanum tuber... [more]
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Properties
Property NameValue
Genbank descriptionCSAC-PNP1241N03 Mature Albedo Citrus sinensis cDNA clone CSAC-PNP1241N03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403653 ID=DR403653; Name=DR403653; organism=Citrus sinensis; type=EST; length=502bp
GGGGGACGTATTCTCTGCGGTCGAGATCTCTCTGCGAACCCTAAATCAAC
CACTGTATTACAGATCAATCAGAGCGACTCGAATTCCTGAGCGAACAGCC
ATGGAGTATACAACCAAACGAAGCCAAGGAGGCCTCCTCGAAGGTCTTTA
CAGAGTCATTATGCGCCGCAACTCCATCTACGTAACCTTCATCATCGCCG
GTGCTTTCGCTGGTGAACGGGCTGTGGATTATGGGGTTCGCAAAATCTGG
GAGCACAACAATGTCGGGAAACGATATGAAGACATTCCAGCTTTGGGGCA
AAGGCAATCAGAAGAGTAGTACCTCTCCTGTTCATTCTGAAGTTTTATAT
AAAAAATTTGGAAGGGGCGTCCAATGTAATGGATAGCTGTTTTATGTTGC
AATAAATTTTTTGTATGCTTGAGTGCATCAGACGTGTTTTTCAAGCTTGG
TTTCAATCAAATAGGTTTTGGAGAAAAAAAAAAAAAAAAAAAAAAAAAAA
AA
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