CX053765

Overview
NameCX053765
Unique NameCX053765
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length756
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX053765 vs. ExPASy Swiss-Prot
Match: OLEO1_PRUDU (Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.335e-39
Identity = 80/98 (81.63%), Postives = 92/98 (93.88%), Query Frame = -3
Query:  311 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLSSGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 604
            GGSLLVLSGL +AGTVIALTIATPLLVI SPVLVPA+ITV+L+ MGFL+SGGFGVAA++VLSWIY+YVTG  PPGADQL+QAR KLAGKAR+++DRAE
Sbjct:   36 GGSLLVLSGLVLAGTVIALTIATPLLVIFSPVLVPALITVALITMGFLTSGGFGVAAVTVLSWIYKYVTGKQPPGADQLDQARHKLAGKARDIKDRAE 133          
BLAST of CX053765 vs. ExPASy Swiss-Prot
Match: OLEO2_BRANA (Major oleosin NAP-II (Fragment) OS=Brassica napus PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.126e-35
Identity = 72/98 (73.47%), Postives = 87/98 (88.78%), Query Frame = -3
Query:  311 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLSSGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 604
            GGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV+LLI GFLSSGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL GK ++M+DRA+
Sbjct:   55 GGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGGKVQDMKDRAQ 152          
BLAST of CX053765 vs. ExPASy Swiss-Prot
Match: OLEO1_ARATH (Oleosin 18.5 kDa OS=Arabidopsis thaliana GN=At4g25140 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.281e-35
Identity = 71/98 (72.45%), Postives = 87/98 (88.78%), Query Frame = -3
Query:  311 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLSSGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 604
            GGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV+LLI GFLSSGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL  KA++++DRA+
Sbjct:   53 GGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDLKDRAQ 150          
BLAST of CX053765 vs. ExPASy Swiss-Prot
Match: OLEO3_BRANA (Oleosin Bn-III OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.301e-35
Identity = 70/98 (71.43%), Postives = 87/98 (88.78%), Query Frame = -3
Query:  311 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLSSGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 604
            GGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV++LI GFLSSGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL  KA++++DRA+
Sbjct:   67 GGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVAMLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDLKDRAQ 164          
BLAST of CX053765 vs. ExPASy Swiss-Prot
Match: OLEO5_BRANA (Oleosin Bn-V (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.233e-33
Identity = 69/97 (71.13%), Postives = 83/97 (85.57%), Query Frame = -3
Query:  314 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLSSGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRA 604
            G SLLVLS LT+ GTVIAL +ATPLLVI SP+LVPA+ITV+LLI GFLSSG FG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL  KA++M+DRA
Sbjct:   55 GDSLLVLSSLTLVGTVIALIVATPLLVIFSPILVPALITVALLITGFLSSGAFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDMKDRA 151          
BLAST of CX053765 vs. ExPASy Swiss-Prot
Match: OLEO1_ORYSJ (Oleosin 16 kDa OS=Oryza sativa subsp. japonica GN=OLE16 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 7.556e-32
Identity = 64/98 (65.31%), Postives = 85/98 (86.73%), Query Frame = -3
Query:  311 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLSSGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 604
            GGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I ++L+  GF++SGG GVAA+SV SW+Y+Y+TG HPPGADQL+ A+ +LA KAR++++ A+
Sbjct:   42 GGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALALMAAGFVTSGGLGVAALSVFSWMYKYLTGKHPPGADQLDHAKARLASKARDIKEAAQ 139          
BLAST of CX053765 vs. ExPASy Swiss-Prot
Match: OLE16_BROSE (Oleosin 16 kDa OS=Bromus secalinus GN=OLE16 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.556e-32
Identity = 64/98 (65.31%), Postives = 85/98 (86.73%), Query Frame = -3
Query:  311 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLSSGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 604
            GGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I+++L+  GF++SGG GVAA+SV SW+Y+Y+ G HPPGADQL+ A+ +LA KAR+++D A+
Sbjct:   61 GGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAISMALMSAGFVTSGGLGVAAVSVFSWMYKYLAGKHPPGADQLDHAKARLASKARDIKDAAQ 158          
BLAST of CX053765 vs. ExPASy Swiss-Prot
Match: OLEO1_MAIZE (Oleosin Zm-I OS=Zea mays GN=OLE16 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.289e-31
Identity = 64/98 (65.31%), Postives = 84/98 (85.71%), Query Frame = -3
Query:  311 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLSSGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 604
            GGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I ++L+  GF++SGG GVAA+SV SW+Y+Y+TG HPP ADQL+ A+ +LA KAR+++D A+
Sbjct:   50 GGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALALMAAGFVTSGGLGVAALSVFSWMYKYLTGKHPPAADQLDHAKARLASKARDVKDAAQ 147          
BLAST of CX053765 vs. ExPASy Swiss-Prot
Match: OLEO3_ARATH (Oleosin 14.9 kDa OS=Arabidopsis thaliana GN=OL3 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 7.819e-29
Identity = 62/94 (65.96%), Postives = 81/94 (86.17%), Query Frame = -3
Query:  323 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLSSGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMR 604
            GGSLLVLSGLT+AGTVIALT+ATPLLVI SPVLVPAV+TV+L+I GFL+SGGFG+AAI+  SW+YR++TG    G+D++E ARMK+  + ++ +
Sbjct:   37 GGSLLVLSGLTLAGTVIALTVATPLLVIFSPVLVPAVVTVALIITGFLASGGFGIAAITAFSWLYRHMTGS---GSDKIENARMKVGSRVQDTK 127          
BLAST of CX053765 vs. ExPASy Swiss-Prot
Match: OLEO1_SOYBN (P24 oleosin isoform A OS=Glycine max PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.866e-17
Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = -3
Query:  335 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLSSGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKA 604
            GG LL+L+GLT+AGT+  L +ATPL V+ SPVLVPA + + L + GFL+SG FG+ A+S  SWI  Y+    P   +    A+  LA  A
Sbjct:   66 GGILLLLAGLTLAGTLTGLAVATPLFVLFSPVLVPATVAIGLAVAGFLTSGAFGLTALSSFSWILNYIRETQPASENLAAAAKHHLAEAA 155          
The following BLAST results are available for this feature:
BLAST of CX053765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
OLEO1_PRUDU8.335e-3981.63Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1[more]
OLEO2_BRANA1.126e-3573.47Major oleosin NAP-II (Fragment) OS=Brassica napus ... [more]
OLEO1_ARATH4.281e-3572.45Oleosin 18.5 kDa OS=Arabidopsis thaliana GN=At4g25... [more]
OLEO3_BRANA7.301e-3571.43Oleosin Bn-III OS=Brassica napus PE=2 SV=1[more]
OLEO5_BRANA5.233e-3371.13Oleosin Bn-V (Fragment) OS=Brassica napus PE=2 SV=... [more]
OLEO1_ORYSJ7.556e-3265.31Oleosin 16 kDa OS=Oryza sativa subsp. japonica GN=... [more]
OLE16_BROSE7.556e-3265.31Oleosin 16 kDa OS=Bromus secalinus GN=OLE16 PE=2 S... [more]
OLEO1_MAIZE1.289e-3165.31Oleosin Zm-I OS=Zea mays GN=OLE16 PE=2 SV=2[more]
OLEO3_ARATH7.819e-2965.96Oleosin 14.9 kDa OS=Arabidopsis thaliana GN=OL3 PE... [more]
OLEO1_SOYBN6.866e-1747.78P24 oleosin isoform A OS=Glycine max PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_8A10_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-8A10-A19-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX053765 ID=CX053765; Name=CX053765; organism=Citrus sinensis; type=EST; length=756bp
TTTTTTAAAACAAAAATCACAAGACAAATATTACATTTCAAAGACCAATA
ACAAAAACCCTGCAGGAGCGCCCCACCACATTAACAAAACTTATTACAGA
GATTACCACGAATACAAAAAGGAAAAAACACATTGGCACAAATTAACAAG
AAAATTAACACAAAAGACAACCAATGACCCCTCAACTAGTATCATAGCCG
TTTGATCTTCACCCATATCTTTATCAACCAACAACAACCCTTCATCACAT
GCATAACAACGCAGTTTAAGAACCCTGCTGCGAGCCAGTGATTTGCTGCT
GCCCAAACTGCTCAGCCCTGTCCCTCATCTCCCTAGCCTTACCGGCCAGC
TTCATCCGCGCCTGCTCCAGCTGATCCGCCCCTGGTGGGTGCCCCCCAGT
GACATACCTATAAATCCATGATAAGACGCTGATGGCTGCTACACCGAATC
CGCCAGAGGACAAGAACCCCATGATGAGAAGAGAAACGGTGATAACCGCA
GGGACAAGAACAGGACTACAAATGACTAGCAGTGGAGTAGCAATGGTCAG
TGCAATGACAGTCCCAGCCATGGTTAAGCCAGAGAGGACCAACAGAGACC
CACCGGCTGTGACGGCGGTTGCCGCCTTCACGACCTGGTGGGACCGGGGC
TGACGGCTCTGCAGCTGTGTCTGCTGGAGTGGTTGGTAATGTTCAGCCAT
ATCGGTATTGATGTTAAATCTAACGGTGATTATTTGTCGATGATAAGAGG
TGTCCT
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