DR403623

Overview
NameDR403623
Unique NameDR403623
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length397
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403623 vs. ExPASy Swiss-Prot
Match: CMTA5_ARATH (Calmodulin-binding transcription activator 5 OS=Arabidopsis thaliana GN=CMTA5 PE=2 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 1.428e-46
Identity = 81/97 (83.51%), Postives = 92/97 (94.85%), Query Frame = 1
Query:  106 LVGSEIHGFHTLKDLDVANMMEEAKTRWLRPNEIHAILCNSKYFSINAKPVNLPKSGTVVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGN 396
            L+GSEIHGFHTL+DLD+  M++EA +RWLRPNEIHA+LCN K+F+IN KPVNLPKSGT+VLFDRKMLRNFRKDGHNWKKKKDGKT+KEAHEHLKVGN
Sbjct:    9 LIGSEIHGFHTLQDLDIQTMLDEAYSRWLRPNEIHALLCNHKFFTINVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTIKEAHEHLKVGN 105          
BLAST of DR403623 vs. ExPASy Swiss-Prot
Match: CMTA6_ARATH (Calmodulin-binding transcription activator 6 OS=Arabidopsis thaliana GN=CMTA6 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.934e-35
Identity = 70/97 (72.16%), Postives = 77/97 (79.38%), Query Frame = 1
Query:  106 LVGSEIHGFHTLKDLDVANMMEEAKTRWLRPNEIHAILCNSKYFSINAKPVNLPKSGTVVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGN 396
            L+GSEIHGFHTL+DLDV  M+EEAK+RWLRPNEIHAILC                 G ++LFDRKMLRNFRKDGHNWKKKKDG+TVKEAHEHLKVGN
Sbjct:    9 LIGSEIHGFHTLQDLDVQTMLEEAKSRWLRPNEIHAILC-----------------GRIILFDRKMLRNFRKDGHNWKKKKDGRTVKEAHEHLKVGN 88          
BLAST of DR403623 vs. ExPASy Swiss-Prot
Match: CMTA3_ARATH (Calmodulin-binding transcription activator 3 OS=Arabidopsis thaliana GN=CMTA3 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.389e-25
Identity = 54/94 (57.45%), Postives = 68/94 (72.34%), Query Frame = 1
Query:  115 SEIHGFHTLKDLDVANMMEEAKTRWLRPNEIHAILCNSKYFSINAKPVNLPKSGTVVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGN 396
            +E   F  + +LDV  ++ EA+ RWLRP EI  IL N + F I+ +P   P SG+V +FDRK+LR FRKDGHNW+KKKDGKTVKEAHE LK G+
Sbjct:    2 AEARRFSPVHELDVGQILSEARHRWLRPPEICEILQNYQRFQISTEPPTTPSSGSVFMFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGS 95          
BLAST of DR403623 vs. ExPASy Swiss-Prot
Match: CMTA2_ARATH (Calmodulin-binding transcription activator 2 OS=Arabidopsis thaliana GN=CMTA2 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.004e-25
Identity = 53/83 (63.86%), Postives = 65/83 (78.31%), Query Frame = 1
Query:  148 LDVANMMEEAKTRWLRPNEIHAILCNSKYFSINAKPVNLPKSGTVVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGN 396
            LD+  ++ EA+ RWLRP EI  IL N + F I ++P N P SG++ LFDRK+LR FRKDGHNW+KKKDGKTVKEAHE LKVG+
Sbjct:   13 LDIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGS 95          
BLAST of DR403623 vs. ExPASy Swiss-Prot
Match: CMTA1_ARATH (Calmodulin-binding transcription activator 1 OS=Arabidopsis thaliana GN=CMTA1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.452e-22
Identity = 49/83 (59.04%), Postives = 62/83 (74.70%), Query Frame = 1
Query:  148 LDVANMMEEAKTRWLRPNEIHAILCNSKYFSINAKPVNLPKSGTVVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGN 396
            LD+  ++ EA+ RWLRP EI  IL N   F I ++    P SG++ LFDRK+LR FRKDGHNW+KKKDGKT++EAHE LKVG+
Sbjct:   16 LDMEQLLSEAQHRWLRPTEICEILQNYHKFHIASESPTRPASGSLFLFDRKVLRYFRKDGHNWRKKKDGKTIREAHEKLKVGS 98          
BLAST of DR403623 vs. ExPASy Swiss-Prot
Match: CMTA4_ARATH (Calmodulin-binding transcription activator 4 OS=Arabidopsis thaliana GN=CMTA4 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.291e-17
Identity = 36/87 (41.38%), Postives = 61/87 (70.11%), Query Frame = 1
Query:  136 TLKDLDVANMMEEAKTRWLRPNEIHAILCNSKYFSINAKPVNLPKSGTVVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGN 396
            +L   +++ + +EA +RWL+P E+  IL N +  ++       P SG+++LF++++L+ FRKDGH W++K+DG+ + EAHE LKVGN
Sbjct:   32 SLFQYEISTLYQEAHSRWLKPPEVLFILQNHESLTLTNTAPQRPTSGSLLLFNKRVLKFFRKDGHQWRRKRDGRAIAEAHERLKVGN 118          
The following BLAST results are available for this feature:
BLAST of DR403623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
CMTA5_ARATH1.428e-4683.51Calmodulin-binding transcription activator 5 OS=Ar... [more]
CMTA6_ARATH1.934e-3572.16Calmodulin-binding transcription activator 6 OS=Ar... [more]
CMTA3_ARATH1.389e-2557.45Calmodulin-binding transcription activator 3 OS=Ar... [more]
CMTA2_ARATH9.004e-2563.86Calmodulin-binding transcription activator 2 OS=Ar... [more]
CMTA1_ARATH2.452e-2259.04Calmodulin-binding transcription activator 1 OS=Ar... [more]
CMTA4_ARATH5.291e-1741.38Calmodulin-binding transcription activator 4 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionCSAC-PNP1241L05 Mature Albedo Citrus sinensis cDNA clone CSAC-PNP1241L05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403623 ID=DR403623; Name=DR403623; organism=Citrus sinensis; type=EST; length=397bp
GGGGATTCGAGAGGGAGATAAATAAATAAATAAATAAAACAAATCAGAAA
GCACTCTCTCTGTGATCACCGAAAACAAACAGGTTTTTATGCGATGGCTG
AGCTGCTTGTCGGCTCAGAGATTCATGGATTCCATACGTTGAAAGATTTG
GATGTTGCTAATATGATGGAGGAGGCCAAGACAAGATGGCTTCGTCCAAA
TGAAATTCATGCCATCCTATGTAATAGCAAGTATTTCAGCATCAATGCAA
AGCCAGTGAACTTGCCCAAAAGTGGCACTGTTGTATTGTTTGACCGCAAG
ATGCTTAGGAATTTTCGCAAAGATGGTCATAACTGGAAGAAGAAAAAGGA
CGGGAAGACAGTTAAGGAAGCTCATGAGCATCTAAAAGTTGGCAATG
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