DR403609

Overview
NameDR403609
Unique NameDR403609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403609 vs. ExPASy Swiss-Prot
Match: MDHG_CITLA (Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 5.876e-69
Identity = 95/115 (82.61%), Postives = 101/115 (87.83%), Query Frame = 1
Query:   79 QPTSGANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMTL 423
            QP    NQRIARI+AHLHPP  Q+E ESS L R +CRAKGG+PGFKVA+LGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGVTADISHMDT AVVRGFLGQQQLE ALTGM L
Sbjct:    2 QPIPDVNQRIARISAHLHPPKSQME-ESSALRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDL 115          

HSP 2 Score: 96.2857 bits (238), Expect = 5.876e-69
Identity = 43/49 (87.76%), Postives = 47/49 (95.92%), Query Frame = 3
Query:  411 GHDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 557
            G D++I+PAGVPRKPGMTRDDLF INAGIVKTLCEGIAKCCP+AIVNLI
Sbjct:  112 GMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLI 160          
BLAST of DR403609 vs. ExPASy Swiss-Prot
Match: MDHG_CUCSA (Malate dehydrogenase, glyoxysomal OS=Cucumis sativus GN=MDHG PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.303e-68
Identity = 96/119 (80.67%), Postives = 102/119 (85.71%), Query Frame = 1
Query:   79 QPTSGANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMTL*SFP 435
            QP    NQRIARI+AHLHPP  Q+E ESS L R +CRAKGG+PGFKVA+LGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGVTADISHMDT AVVRGFLGQQQLE ALTGM L   P
Sbjct:    2 QPIPDVNQRIARISAHLHPPKYQME-ESSVLRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLERALTGMDLVVIP 119          

HSP 2 Score: 95.5153 bits (236), Expect = 1.303e-68
Identity = 44/49 (89.80%), Postives = 46/49 (93.88%), Query Frame = 3
Query:  411 GHDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 557
            G D+V+IPAGVPRKPGMTRDDLF INAGIVKTLCEGIAKCCP AIVNLI
Sbjct:  112 GMDLVVIPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPTAIVNLI 160          
BLAST of DR403609 vs. ExPASy Swiss-Prot
Match: MDHG2_ARATH (Probable malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At2g22780 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 2.873e-65
Identity = 90/114 (78.95%), Postives = 99/114 (86.84%), Query Frame = 1
Query:   97 NQRIARIAAHLHPPTLQIE-GESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMTL*SFP 435
            NQRIARI+AHL+PP L  +  + SGL R+ CRAKGGSPGFKVA+LGAAGGIGQPLAMLMK+NPLVSVLHLYDV N PGVTADISHMDT+AVVRGFLGQ QLE+ALTGM L   P
Sbjct:    4 NQRIARISAHLNPPNLHNQIADGSGLNRVACRAKGGSPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVANAPGVTADISHMDTSAVVRGFLGQPQLEEALTGMDLVIIP 117          

HSP 2 Score: 92.4337 bits (228), Expect = 2.873e-65
Identity = 43/49 (87.76%), Postives = 46/49 (93.88%), Query Frame = 3
Query:  411 GHDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 557
            G D+VIIPAGVPRKPGMTRDDLFNINAGIV+TL E IAKCCPKAIVN+I
Sbjct:  110 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLSEAIAKCCPKAIVNII 158          
BLAST of DR403609 vs. ExPASy Swiss-Prot
Match: MDHG_SOYBN (Malate dehydrogenase, glyoxysomal OS=Glycine max PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 1.286e-62
Identity = 86/119 (72.27%), Postives = 94/119 (78.99%), Query Frame = 1
Query:   79 QPTSGANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMTL*SFP 435
            +  SGA+ RI+RIA HL P       +   L R DCRAKGG  GFKVA+LGAAGGIGQPLAMLMK+NPLVS+LHLYDVVNTPGVT+DISHMDT AVVRGFLGQQQLEDAL GM L   P
Sbjct:    2 EANSGASDRISRIAGHLRPQ----REDDVCLKRSDCRAKGGVSGFKVAILGAAGGIGQPLAMLMKMNPLVSLLHLYDVVNTPGVTSDISHMDTGAVVRGFLGQQQLEDALIGMDLVIIP 116          

HSP 2 Score: 97.0561 bits (240), Expect = 1.286e-62
Identity = 45/49 (91.84%), Postives = 47/49 (95.92%), Query Frame = 3
Query:  411 GHDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 557
            G D+VIIPAGVPRKPGMTRDDLFNINAGIVKTLCE IAKCCPKAIVN+I
Sbjct:  109 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAIAKCCPKAIVNVI 157          
BLAST of DR403609 vs. ExPASy Swiss-Prot
Match: MDHG_ORYSJ (Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV=3)

HSP 1 Score: 162.54 bits (410), Expect = 8.242e-62
Identity = 83/119 (69.75%), Postives = 98/119 (82.35%), Query Frame = 1
Query:   79 QPTSGANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMTL*SFP 435
            +  + A +R+ R+A+HL PP  Q+E ES  L   +CRAKG +PGFKVA+LGA+GGIGQPLA+LMK+NPLVSVLHLYDVVNTPGVTADISHM+T AVVRGFLGQ QLE+ALTGM L   P
Sbjct:    2 EDAAAAARRMERLASHLRPPASQME-ESPLLRGSNCRAKGAAPGFKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVNTPGVTADISHMNTGAVVRGFLGQPQLENALTGMDLVIIP 119          

HSP 2 Score: 96.2857 bits (238), Expect = 8.242e-62
Identity = 44/49 (89.80%), Postives = 47/49 (95.92%), Query Frame = 3
Query:  411 GHDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 557
            G D+VIIPAGVPRKPGMTRDDLFNINAGIV+TLCEGIAKCCP AIVN+I
Sbjct:  112 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNVI 160          
BLAST of DR403609 vs. ExPASy Swiss-Prot
Match: MDHG1_ARATH (Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.322e-41
Identity = 85/114 (74.56%), Postives = 99/114 (86.84%), Query Frame = 1
Query:   94 ANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMTL*SFP 435
            ANQRIARI+AHL P   Q+E ++S +GR +CRAKGG+PGFKVA+LGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDT AVVRGFLG +QLEDALTGM L   P
Sbjct:    7 ANQRIARISAHLTP---QMEAKNSVIGRENCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIP 117          

HSP 2 Score: 96.2857 bits (238), Expect = 1.075e-19
Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 3
Query:  381 GATAIGGCPHGHDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 557
            GA  +     G D+VIIPAG+PRKPGMTRDDLF INAGIVKTLCEG+AKCCP AIVNLI
Sbjct:  100 GAKQLEDALTGMDLVIIPAGIPRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVNLI 158          
BLAST of DR403609 vs. ExPASy Swiss-Prot
Match: MDHG2_BRANA (Malate dehydrogenase 2, glyoxysomal OS=Brassica napus GN=MDH2 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 5.023e-41
Identity = 84/115 (73.04%), Postives = 99/115 (86.09%), Query Frame = 1
Query:   94 ANQRIARIAAHLHPP-TLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMTL*SFP 435
            AN+RIA I+AHL P  T Q+E ++S +GR +CRAKGG+PGFKVA+LGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDT AVVRGFLG +QLEDALTGM L   P
Sbjct:    7 ANKRIAMISAHLQPSFTPQMEAKNSVMGRENCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIP 121          

HSP 2 Score: 96.6709 bits (239), Expect = 8.227e-20
Identity = 46/59 (77.97%), Postives = 49/59 (83.05%), Query Frame = 3
Query:  381 GATAIGGCPHGHDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 557
            GA  +     G D+VIIPAGVPRKPGMTRDDLF INAGIVKTLCEG+AKCCP AIVNLI
Sbjct:  104 GAKQLEDALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVNLI 162          
BLAST of DR403609 vs. ExPASy Swiss-Prot
Match: MDHG1_BRANA (Malate dehydrogenase 1, glyoxysomal OS=Brassica napus GN=MDH1 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 3.600e-39
Identity = 82/115 (71.30%), Postives = 96/115 (83.48%), Query Frame = 1
Query:   94 ANQRIARIAAHLHPP-TLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMTL*SFP 435
            A +RIA I+AHL P  T Q+E ++S +G   CRAKGG+PGFKVA+LGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDT AVVRGFLG +QLEDALTGM L   P
Sbjct:    7 AYKRIAMISAHLQPSFTPQMEAKNSVMGLESCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIP 121          

HSP 2 Score: 95.5153 bits (236), Expect = 1.833e-19
Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 3
Query:  381 GATAIGGCPHGHDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 557
            GA  +     G D+VIIPAGVPRKPGMTRDDLF INAGIV+TLCEG+AKCCP AIVNLI
Sbjct:  104 GAKQLEDALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVRTLCEGVAKCCPNAIVNLI 162          
BLAST of DR403609 vs. ExPASy Swiss-Prot
Match: MDHM1_ARATH (Malate dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=At1g53240 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 8.581e-39
Identity = 47/82 (57.32%), Postives = 58/82 (70.73%), Query Frame = 1
Query:  190 AKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMTL*SFP 435
            + G  P  KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+ NTPGV AD+ H++T + V G++G   L  AL G  L   P
Sbjct:   23 SSGSVPERKVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSEVVGYMGDDNLAKALEGADLVIIP 104          

HSP 2 Score: 85.5001 bits (210), Expect = 8.581e-39
Identity = 39/49 (79.59%), Postives = 43/49 (87.76%), Query Frame = 3
Query:  411 GHDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 557
            G D+VIIPAGVPRKPGMTRDDLFNINAGIVK LC  IAK CP A++N+I
Sbjct:   97 GADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLCTAIAKYCPHALINMI 145          
BLAST of DR403609 vs. ExPASy Swiss-Prot
Match: MDHM_BRANA (Malate dehydrogenase, mitochondrial OS=Brassica napus GN=MDH PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 9.277e-38
Identity = 47/82 (57.32%), Postives = 58/82 (70.73%), Query Frame = 1
Query:  190 AKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMTL*SFP 435
            + G  P  KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+ NTPGV AD+ H++T + V G++G   L  AL G  L   P
Sbjct:   23 SSGSVPERKVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSQVVGYMGDDNLAKALEGADLVIIP 104          

HSP 2 Score: 82.0333 bits (201), Expect = 9.277e-38
Identity = 39/49 (79.59%), Postives = 42/49 (85.71%), Query Frame = 3
Query:  411 GHDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 557
            G D+VIIPAGVPRKPGMTRDDLFNINAGIVK L   IAK CP A+VN+I
Sbjct:   97 GADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLWSAIAKYCPHALVNMI 145          
The following BLAST results are available for this feature:
BLAST of DR403609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
MDHG_CITLA5.876e-6982.61Malate dehydrogenase, glyoxysomal OS=Citrullus lan... [more]
MDHG_CUCSA1.303e-6880.67Malate dehydrogenase, glyoxysomal OS=Cucumis sativ... [more]
MDHG2_ARATH2.873e-6578.95Probable malate dehydrogenase, glyoxysomal OS=Arab... [more]
MDHG_SOYBN1.286e-6272.27Malate dehydrogenase, glyoxysomal OS=Glycine max P... [more]
MDHG_ORYSJ8.242e-6269.75Malate dehydrogenase, glyoxysomal OS=Oryza sativa ... [more]
MDHG1_ARATH1.322e-4174.56Malate dehydrogenase, glyoxysomal OS=Arabidopsis t... [more]
MDHG2_BRANA5.023e-4173.04Malate dehydrogenase 2, glyoxysomal OS=Brassica na... [more]
MDHG1_BRANA3.600e-3971.30Malate dehydrogenase 1, glyoxysomal OS=Brassica na... [more]
MDHM1_ARATH8.581e-3957.32Malate dehydrogenase 1, mitochondrial OS=Arabidops... [more]
MDHM_BRANA9.277e-3857.32Malate dehydrogenase, mitochondrial OS=Brassica na... [more]

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Properties
Property NameValue
Genbank descriptionCSAC-PNP1241K13 Mature Albedo Citrus sinensis cDNA clone CSAC-PNP1241K13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403609 ID=DR403609; Name=DR403609; organism=Citrus sinensis; type=EST; length=558bp
GGGGACCGCATCAATTTCATTTTCTGTGAATTGTTTGTTTTATCACAACT
AAGTCTCCAGAAACTCAGAACCATGCAGCAGCCAACTTCAGGAGCAAATC
AACGCATTGCGAGAATCGCTGCTCATCTCCATCCACCAACTCTCCAGATA
GAGGGAGAGAGTTCGGGTTTGGGGCGGATGGATTGCAGGGCAAAAGGCGG
GTCGCCCGGATTCAAGGTGGCTGTATTGGGAGCTGCTGGAGGGATTGGAC
AGCCTCTGGCTATGTTGATGAAGATCAATCCCTTGGTTTCAGTTCTTCAT
CTTTATGATGTTGTCAATACTCCTGGGGTTACTGCCGATATCAGTCACAT
GGATACAAATGCTGTGGTACGAGGATTTTTGGGGCAACAGCAATTGGAGG
ATGCCCTCACGGGCATGACATTGTAATCATTCCCGCTGGTGTTCCTAGGA
AACCTGGAATGACTAGGGATGATCTGTTCAATATCAATGCCGGAATTGTT
AAGACCCTTTGTGAAGGAATAGCTAAGTGCTGTCCAAAAGCTATTGTGAA
CTTGATTA
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