DR403548

Overview
NameDR403548
Unique NameDR403548
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403548 vs. ExPASy Swiss-Prot
Match: ATTY_MOUSE (Tyrosine aminotransferase OS=Mus musculus GN=Tat PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.403e-29
Identity = 64/193 (33.16%), Postives = 99/193 (51.30%), Query Frame = 1
Query:    1 GHLAFGSTPYVPMGVFGSIVPVISLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCLTCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIVLPGRTVGMKNWLRIAFAAEPATLEDGLGRIKAFCQRH 579
            G + F    Y PM    + VP++S G ++KRW+VPGWRLGW++  D   I  N    D +         P T +Q A+  I+  T + F+   +  LK  AD+CY  +  IP L  PV+P GAM++MV + +    +  +D+EF  +L  E+SV  LP       N+ R+        + +   RI+ FC++H
Sbjct:  251 GDMVFSDCKYEPMATLSTNVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNE-IRDGLVKLSQRILGPCTIVQGALKSILQRTPQEFYQDTLSFLKSNADLCYGALSAIPGLQ-PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLIAEQSVHCLPATCFEYPNFFRVVITVPEVMMLEACSRIQEFCEQH 441          
BLAST of DR403548 vs. ExPASy Swiss-Prot
Match: ATTY_HUMAN (Tyrosine aminotransferase OS=Homo sapiens GN=TAT PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.034e-28
Identity = 63/193 (32.64%), Postives = 99/193 (51.30%), Query Frame = 1
Query:    1 GHLAFGSTPYVPMGVFGSIVPVISLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCLTCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIVLPGRTVGMKNWLRIAFAAEPATLEDGLGRIKAFCQRH 579
            G + F    Y P+    + VP++S G ++KRW+VPGWRLGW++  D   I  N    D +         P T +Q A+  I+  T   F+   +  LK  AD+CY  +  IP L  PV+P GAM++MV + +    +  +D+EF  +L  E+SV  LP       N++R+        + +   RI+ FC++H
Sbjct:  251 GDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNE-IRDGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLR-PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVMMLEACSRIQEFCEQH 441          
BLAST of DR403548 vs. ExPASy Swiss-Prot
Match: ATTY_RAT (Tyrosine aminotransferase OS=Rattus norvegicus GN=Tat PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.532e-28
Identity = 62/193 (32.12%), Postives = 99/193 (51.30%), Query Frame = 1
Query:    1 GHLAFGSTPYVPMGVFGSIVPVISLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCLTCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIVLPGRTVGMKNWLRIAFAAEPATLEDGLGRIKAFCQRH 579
            G + F    Y P+    + VP++S G ++KRW+VPGWRLGW++  D   I  N    D +         P T +Q A+  I+  T + F+   +  LK  AD+CY  +  IP L  PV+P GAM++MV + +    +  +D+EF  +L  E++V  LP       N+ R+        + +   RI+ FC++H
Sbjct:  251 GDMVFSDCKYEPLANLSTNVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNE-IRDGLVKLSQRILGPCTIVQGALKSILQRTPQEFYHDTLSFLKSNADLCYGALAAIPGLQ-PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLIAEQAVHCLPATCFEYPNFFRVVITVPEVMMLEACSRIQEFCEQH 441          
BLAST of DR403548 vs. ExPASy Swiss-Prot
Match: ATTY_BOVIN (Tyrosine aminotransferase OS=Bos taurus GN=TAT PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.919e-28
Identity = 61/193 (31.61%), Postives = 98/193 (50.78%), Query Frame = 1
Query:    1 GHLAFGSTPYVPMGVFGSIVPVISLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCLTCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIVLPGRTVGMKNWLRIAFAAEPATLEDGLGRIKAFCQRH 579
            G + F  + + P+    S VP++S G ++KRW+VPGWR+GW++  D   I  N    D +         P T +Q A+  I+  T   F+   +  LK  AD+CY  +  IP L  P+ P GAM++MV + +    +  +D+EF  +L  E+SV  LP       N+ R+        + +   RI+ FC++H
Sbjct:  244 GDMVFSDSKFEPLATLSSKVPILSCGGLAKRWLVPGWRMGWILIHDRRDIFGNE-IRDGLTKLSQRILGPCTLVQGALKSILCRTPRVFYHNTLSFLKSNADLCYGALAAIPGLR-PIHPSGAMYLMVGIEMEHFPEFENDVEFTEQLVAEQSVHCLPATCFEYPNFFRVVITVPEVMMLEACSRIQEFCEQH 434          
BLAST of DR403548 vs. ExPASy Swiss-Prot
Match: ATTY_DICDI (Tyrosine aminotransferase OS=Dictyostelium discoideum GN=tat PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.242e-26
Identity = 64/197 (32.49%), Postives = 104/197 (52.79%), Query Frame = 1
Query:    7 LAFGSTPYVPMGVFGSIVPVISLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETN---EAFFAKIIGLLKETADICYERIKEIPCLTCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIVLPGRTVGMKNWLRIAFAAEPATLEDGLGRIKAFCQRHAKK 588
            L FG   + PM      VP++S+G I+KR++VPGWRLGW+   D + I  N   ++ +         P + +Q+ +P+++D  N   + + + I   L+  + +  + + +   L  PV   G M+ M++++ S  EDI DD EF  KL +E+SV +L G    + N+ RI F A    L +   RI  FC+ H KK
Sbjct:  222 LTFGEHKFYPMASLTDKVPILSIGGIAKRFLVPGWRLGWVAIHDRDNIFSNGRIIEGLISLSQVILGPNSLVQSILPKLLDPQNTQVKEWCSTITKTLESHSKLTVDMLSKANGLK-PVCSSGTMYQMIEIDCSKYEDIADDNEFVGKLLEEQSVFLLQGTVFSLPNFFRIVFCAPIDKLTEAYERIIEFCETHKKK 417          
BLAST of DR403548 vs. ExPASy Swiss-Prot
Match: ATTY_TRYCR (Tyrosine aminotransferase OS=Trypanosoma cruzi PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.970e-24
Identity = 64/179 (35.75%), Postives = 96/179 (53.63%), Query Frame = 1
Query:   46 FGSIVPVISLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCLTCPVKPQGAMFVMVKLNVSMLEDIGDDLEFCLKLAKEESVIVLPGRTVGMKNWLRIAFAAEPATLEDGLGRIKAFCQRHA 582
            F + VP + LG  +K  +VPGWRLGWL+  DP+G      F++ +K        P T +QAA+   +  T +    +I+  ++E+A   Y  I E   L  P  P+GAM++M ++++    DI  D+EF  KL +EE+V VLPG       + R+          + + RIKAFCQRHA
Sbjct:  239 FETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHG--NGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLA-PTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPVEVYREAVERIKAFCQRHA 414          
BLAST of DR403548 vs. ExPASy Swiss-Prot
Match: AAT_SULSO (Aspartate aminotransferase OS=Sulfolobus solfataricus GN=aspC PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11
Identity = 44/175 (25.14%), Postives = 93/175 (53.14%), Query Frame = 1
Query:   64 VISLGSISKRWIVPGWRLGWLVTSDPNGILQNSGFVDSIKGCLNAASHPVTFIQAAVPRIVDETNEAFFAKIIGLLKETADICYERIKEIPCLTCPVKPQGAMFVMVKLNVSMLEDIGDDLE-FCLKLAKEESVIVLPGRTVGM---KNWLRIAFAAEPATLEDGLGRIKAFCQR 576
            +I +   SK + + GWRLG++V      I+Q  G + +     N  + P +F+Q A  +  D  +E    +++ L K+  D+ Y+ + ++  +    KP GA ++   ++  +L+  G D++   +KL +E+ V+ +PG    +   K +LR++FA     +++G+ +I+ F ++
Sbjct:  234 LIYVNGFSKTFSMTGWRLGYIVAK--REIIQKMGILAA-----NVYTAPTSFVQKAAVKAFDTFDEV--NQMVSLFKKRRDVMYDELTKVKGVEVS-KPNGAFYMFPNVS-KILKTSGFDVKSLAIKLIEEKGVVTIPGEVFPLNIGKEFLRLSFAVNEEVIKEGIQKIREFAEQ 397          
The following BLAST results are available for this feature:
BLAST of DR403548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ATTY_MOUSE2.403e-2933.16Tyrosine aminotransferase OS=Mus musculus GN=Tat P... [more]
ATTY_HUMAN2.034e-2832.64Tyrosine aminotransferase OS=Homo sapiens GN=TAT P... [more]
ATTY_RAT4.532e-2832.12Tyrosine aminotransferase OS=Rattus norvegicus GN=... [more]
ATTY_BOVIN5.919e-2831.61Tyrosine aminotransferase OS=Bos taurus GN=TAT PE=... [more]
ATTY_DICDI4.242e-2632.49Tyrosine aminotransferase OS=Dictyostelium discoid... [more]
ATTY_TRYCR3.970e-2435.75Tyrosine aminotransferase OS=Trypanosoma cruzi PE=... [more]
AAT_SULSO3.855e-1125.14Aspartate aminotransferase OS=Sulfolobus solfatari... [more]
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Properties
Property NameValue
Genbank descriptionCSAC-PNP1241H04 Mature Albedo Citrus sinensis cDNA clone CSAC-PNP1241H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403548 ID=DR403548; Name=DR403548; organism=Citrus sinensis; type=EST; length=706bp
GGGCACCTTGCATTTGGGAGCACGCCTTATGTGCCAATGGGAGTTTTCGG
GTCAATTGTGCCTGTTATCAGTCTTGGGTCTATATCAAAGAGATGGATTG
TTCCTGGCTGGCGCCTCGGATGGCTTGTGACAAGTGACCCCAATGGCATC
CTTCAAAATTCAGGATTTGTTGATTCTATAAAGGGCTGTCTCAATGCAGC
CTCTCATCCTGTAACCTTCATTCAGGCAGCAGTGCCCCGTATAGTTGACG
AAACAAATGAGGCTTTCTTTGCGAAAATCATTGGCTTACTAAAAGAGACT
GCAGACATATGCTATGAAAGAATTAAGGAGATTCCTTGCTTAACCTGCCC
AGTGAAACCACAAGGGGCCATGTTTGTCATGGTGAAGCTGAACGTTTCGA
TGCTTGAAGACATTGGTGATGACTTGGAATTCTGTCTCAAACTTGCTAAA
GAGGAATCAGTCATTGTTTTACCAGGGCGAACTGTGGGAATGAAAAATTG
GCTCCGCATAGCTTTTGCGGCCGAGCCTGCAACTCTTGAAGATGGCCTTG
GGAGGATAAAAGCTTTTTGTCAAAGGCATGCCAAAAAGCAATAAAGTCTG
TGTGAAACTCTCAGGAACATGATCGATTTCATGCCCCATCTCATGTTATT
AGAGTTTTGTTCCCTGTTATAAGCTTATTATATATTCAGATAAAAATCAA
AAGGCA
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