DR403545

Overview
NameDR403545
Unique NameDR403545
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length597
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403545 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.384e-23
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 2
Query:   92 MSDTCGNCDCADRSQCVKEGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 289
            MSDTCGNCDCAD++QCVK+GSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of DR403545 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.341e-18
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 2
Query:  101 TCGNCDCADRSQCVKEGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCGS 292
            TCGNCDC D+SQCVK+G+SY  D VET+ S+V  V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of DR403545 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.057e-18
Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 2
Query:   92 MSDTCGNCDCADRSQCVKEGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTC 286
            MSD CGNCDCAD SQCVK+G+S   D VETD S++  VV M V AAE+ G CKCG +C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNSI--DIVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of DR403545 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.326e-16
Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 2
Query:   92 MSDTCGNCDCADRSQCVKEGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTC 286
            MS  C NCDC+D SQC K+G S+    VET+   + TV+ MD  AAE  GNCKCGP+CACV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of DR403545 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.326e-16
Identity = 38/66 (57.58%), Postives = 46/66 (69.70%), Query Frame = 2
Query:   92 MSDTCGNCDCADRSQCVKEGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 289
            MS  C NCDCAD +QCVK+G+SY    VET+   + TV V D  AAE +G CKCG  C+CV+CTCG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of DR403545 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.164e-15
Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 2
Query:   92 MSDTCGNCDCADRSQCVKEGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 289
            MSD CGNCDCAD+SQCVK+G+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DR403545 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.164e-15
Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 2
Query:   92 MSDTCGNCDCADRSQCVKEGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 289
            MSD CGNCDCAD+SQCVK+G+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DR403545 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.051e-13
Identity = 32/66 (48.48%), Postives = 41/66 (62.12%), Query Frame = 2
Query:   92 MSDTCGNCDCADRSQCVKEGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 289
            MSD CGNCDCAD+SQCVK+G+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of DR403545 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.920e-12
Identity = 31/66 (46.97%), Postives = 41/66 (62.12%), Query Frame = 2
Query:   92 MSDTCGNCDCADRSQCVKEGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 289
            MSD CG+CDCAD+SQCVK+G+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of DR403545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA5.384e-2368.18Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC2.341e-1859.38Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_ACTDE3.057e-1866.15Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_PRUAV8.326e-1656.92Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO8.326e-1657.58Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ3.164e-1553.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI3.164e-1553.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3B_ORYSJ5.051e-1348.48Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI1.920e-1246.97Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionCSAC-PNP1241H01 Mature Albedo Citrus sinensis cDNA clone CSAC-PNP1241H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403545 ID=DR403545; Name=DR403545; organism=Citrus sinensis; type=EST; length=597bp
GGGATATCATCACAGCAAAGCAAAGCAAGTTTCGTACAATAAAGAGCCCT
CTATTTCCAGTTTTAAGTTCTAAGTTCTAAGCTCAATCAACATGTCGGAC
ACCTGCGGCAACTGCGACTGCGCTGACAGGAGCCAGTGTGTGAAGGAGGG
AAGCAGCTATGCTGCTGACTTCGTCGAGACTGACTTGAGCTTTGTCAGCA
CCGTTGTTGTCATGGACGTTCAGGCTGCTGAGGCTGAAGGTAACTGCAAG
TGCGGCCCCACCTGCGCTTGTGTGAACTGCACTTGTGGTAGTCACTAATA
AGCAAACACATGCAGCAAAAAATAAGAAGCTGCAAGTGTGCCTAAATATT
GTGGGGGTTAAGAATAATGTAAGGGTGATTAAAAAAAAAAAGAAAAATTC
TCTACTTCGTTTTTATGATGGTCTACTACTAGTGTGTGGAGTGATGTGCG
TGTTGTGTCACCCATCACTCGTAATGTTTTGTGTTTCCTTCTTCATAATC
ATGTAATATATGGCCATGGCCATGACCGTGGCCTTGTGTGGTTTAATTTT
AATGTATTATTGTTAGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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