DR403538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403538 vs. ExPASy Swiss-Prot
Match: SUI11_ARATH (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana GN=At4g27130 PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.571e-37 Identity = 74/113 (65.49%), Postives = 90/113 (79.65%), Query Frame = 2 Query: 134 MVDIDSQIPTSYDPFADIK-DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKVLKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 469 M ++DSQ+PT++DPFAD + G K YVH+RVQQRNG+K LTTVQGLK+++ Y K+LKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ +V KD IKIHGF Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
BLAST of DR403538 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSJ (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica GN=GOS2 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37 Identity = 75/115 (65.22%), Postives = 89/115 (77.39%), Query Frame = 2 Query: 134 MVDIDSQIPTSYDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKVLKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 469 M D+D QIPT++DPFA+ A G K YVH+R+QQRNG+K LTTVQGLK++F Y K+LKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ IV K+ IKIHGF Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of DR403538 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSI (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica GN=GOS2 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37 Identity = 75/115 (65.22%), Postives = 89/115 (77.39%), Query Frame = 2 Query: 134 MVDIDSQIPTSYDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKVLKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 469 M D+D QIPT++DPFA+ A G K YVH+R+QQRNG+K LTTVQGLK++F Y K+LKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ IV K+ IKIHGF Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of DR403538 vs. ExPASy Swiss-Prot
Match: SUI1_MAIZE (Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37 Identity = 75/115 (65.22%), Postives = 89/115 (77.39%), Query Frame = 2 Query: 134 MVDIDSQIPTSYDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKVLKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 469 M D+D QIPT++DPFA+ A G K YVH+R+QQRNG+K LTTVQGLK++F Y K+LKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ IV K+ IKIHGF Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of DR403538 vs. ExPASy Swiss-Prot
Match: SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37 Identity = 73/113 (64.60%), Postives = 89/113 (78.76%), Query Frame = 2 Query: 134 MVDIDSQIPTSYDPFADIK-DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKVLKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 469 M D++ Q+PT++DPFAD + G K YVH+RVQQRNG+K LTTVQGLK+++ Y K+LKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ +V KD IKIHGF Sbjct: 1 MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
BLAST of DR403538 vs. ExPASy Swiss-Prot
Match: SUI1_PIMBR (Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 7.799e-37 Identity = 75/113 (66.37%), Postives = 90/113 (79.65%), Query Frame = 2 Query: 134 MVDIDSQIPTSYDPFADIKDSLAPGD-KGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKVLKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 469 MVD D QIPTS+DPFA+ + + A G K YVH+R+QQRNG+K LTTVQGLK++ Y K+LKDLKK CCNG VVNDK LGKVIQLQGD RKNV F+V++ IV KD+IK+H F Sbjct: 1 MVDSDIQIPTSFDPFAEAEITDATGSTKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKILKDLKKALCCNGTVVNDKELGKVIQLQGDQRKNVSTFIVQAGIVKKDQIKVHNF 113
BLAST of DR403538 vs. ExPASy Swiss-Prot
Match: SUI1_BRAOL (Protein translation factor SUI1 homolog OS=Brassica oleracea PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 7.799e-37 Identity = 73/113 (64.60%), Postives = 90/113 (79.65%), Query Frame = 2 Query: 134 MVDIDSQIPTSYDPFADIK-DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKVLKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 469 M ++DSQ+PT++DPFAD + G K YVH+RVQQRNG+K LTTVQGLK+++ Y K+LKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ +V KD I+IHGF Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113
BLAST of DR403538 vs. ExPASy Swiss-Prot
Match: SUI1_SPOST (Protein translation factor SUI1 homolog OS=Sporobolus stapfianus PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.330e-36 Identity = 74/115 (64.35%), Postives = 89/115 (77.39%), Query Frame = 2 Query: 134 MVDIDSQIPTSYDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKVLKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 469 M D+D QIPT++DPF++ A G K YVH+R+QQRNG+K LTTVQGLK++F Y K+LKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ IV K+ IKIHGF Sbjct: 1 MSDLDIQIPTAFDPFSEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of DR403538 vs. ExPASy Swiss-Prot
Match: SUI1_SALBA (Protein translation factor SUI1 homolog OS=Salix bakko PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.055e-36 Identity = 73/113 (64.60%), Postives = 88/113 (77.88%), Query Frame = 2 Query: 134 MVDIDSQIPTSYDPFADIK-DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKVLKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 469 M + D+ IPT++DPFA+ + G K YVH+RVQQRNG+K LTTVQGLK+D+ Y K+LKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ IV K+ IKIHGF Sbjct: 1 MSEFDNAIPTAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKKENIKIHGF 113
BLAST of DR403538 vs. ExPASy Swiss-Prot
Match: EIF1_PONAB (Eukaryotic translation initiation factor 1 OS=Pongo abelii GN=EIF1 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.015e-25 Identity = 53/105 (50.48%), Postives = 74/105 (70.48%), Query Frame = 2 Query: 164 SYDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKVLKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 469 S+DPFAD D L G + Y+H+R+QQRNG+K LTTVQG+ +D+ +K++K KK+F CNG V+ G+VIQLQGD RKN+ FLV+ + D++K+HGF Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113 The following BLAST results are available for this feature:
BLAST of DR403538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403538 ID=DR403538; Name=DR403538; organism=Citrus sinensis; type=EST; length=649bpback to top |