DR403527

Overview
NameDR403527
Unique NameDR403527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403527 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 9.290e-23
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 3
Query:   87 MSDTCGNCDCADRSQCVKKGSSYAADFDETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 284
            MSDTCGNCDCAD++QCVKKGSSY AD  ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of DR403527 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.275e-18
Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 3
Query:   96 TCGNCDCADRSQCVKKGSSYAADFDETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCGS 287
            TCGNCDC D+SQCVKKG+SY  D  ET+ S+V  V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of DR403527 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.890e-18
Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = 3
Query:   87 MSDTCGNCDCADRSQCVKKGSSYAADFDETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTC 281
            MSD CGNCDCAD SQCVKKG+S   D  ETD S++  VV M V AAE+ G CKCG +C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNSI--DIVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of DR403527 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.876e-15
Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 3
Query:   87 MSDTCGNCDCADRSQCVKKGSSYAADFDETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTC 281
            MS  C NCDC+D SQC KKG S+     ET+   + TV+ MD  AAE  GNCKCGP+CACV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of DR403527 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.876e-15
Identity = 38/66 (57.58%), Postives = 45/66 (68.18%), Query Frame = 3
Query:   87 MSDTCGNCDCADRSQCVKKGSSYAADFDETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 284
            MS  C NCDCAD +QCVKKG+SY     ET+   + TV V D  AAE +G CKCG  C+CV+CTCG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of DR403527 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 3
Query:   87 MSDTCGNCDCADRSQCVKKGSSYAADFDETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 284
            MSD CGNCDCAD+SQCVKKG+SY     E + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DR403527 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 3
Query:   87 MSDTCGNCDCADRSQCVKKGSSYAADFDETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 284
            MSD CGNCDCAD+SQCVKKG+SY     E + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DR403527 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.138e-12
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 3
Query:   87 MSDTCGNCDCADRSQCVKKGSSYAADFDETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 284
            MSD CGNCDCAD+SQCVKKG+SY     + + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of DR403527 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.325e-12
Identity = 31/66 (46.97%), Postives = 40/66 (60.61%), Query Frame = 3
Query:   87 MSDTCGNCDCADRSQCVKKGSSYAADFDETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 284
            MSD CG+CDCAD+SQCVKKG+SY     + + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of DR403527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA9.290e-2369.70Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC5.275e-1859.38Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_ACTDE6.890e-1866.15Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_PRUAV1.876e-1556.92Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO1.876e-1557.58Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ7.130e-1553.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI7.130e-1553.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3B_ORYSJ1.138e-1248.48Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI4.325e-1246.97Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionCSAC-PNP1241F22 Mature Albedo Citrus sinensis cDNA clone CSAC-PNP1241F22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403527 ID=DR403527; Name=DR403527; organism=Citrus sinensis; type=EST; length=599bp
GGGATCACAGCAAAGCAAAGCAAGTTTCGTACAATAAAGAGCCCTCTATT
TCCAGTTTTAAGTTCTAAGTTCTAAGCTCAATCAACATGTCGGACACCTG
CGGCAACTGCGACTGCGCTGACAGGAGCCAGTGTGTGAAGAAGGGAAGCA
GCTATGCTGCTGACTTCGACGAGACTGACTTGAGCTTTGTCAGCACCGTT
GTTGTCATGGACGTTCAGGCTGCTGAGGCTGAAGGTAACTGCAAGTGCGG
CCCCACCTGCGCTTGTGTGAACTGCACTTGTGGTAGTCACTAATAAGCAA
ACACATGCAGCAAAAAATAAGAAGCTGCAAGTGTGCCTAAATATTGTGGG
GGTTAAGAATAATGTAAGGGTGATTAAAAAAAAAAAAGAAAAATTCTCTA
CTTCGTTTTTATGATGGTCTACTACTAGTGTGTGGAGTGATGTGCGTGTT
GTGTCACCCATCACTCGTAATGTTTTGTGTTTCCTTCTTCATAATCATGT
AATATATGGCCATGGCCATGACCGTGGCCTTGTGTGGTTTAATTTTAATG
TATTATTGTTAGTCTACAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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