CX053054

Overview
NameCX053054
Unique NameCX053054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX053054 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 6.817e-63
Identity = 121/160 (75.62%), Postives = 137/160 (85.62%), Query Frame = -2
Query:  286 MDFRIMGLDSSPLFSTLQHMMEMGADDSADNKSSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXKTIEVKIA 765
            MDFR+MGL+S PLF TLQHMM+M  D + DNK+ NAPT +YVRDAKAMAATPADVKEYPNSYVF +DMPGLKSGDIKVQVEDDN+LLI GERKR+EEK+GAKY+RMERRVGK MRKFVLPENAN +AISAVCQDGVL+VTV           +TI+VK+A
Sbjct:    1 MDFRVMGLES-PLFHTLQHMMDMSEDGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQVKVA 159          
BLAST of CX053054 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.864e-61
Identity = 119/160 (74.38%), Postives = 134/160 (83.75%), Query Frame = -2
Query:  286 MDFRIMGLDSSPLFSTLQHMMEMGADDSADNKSSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXKTIEVKIA 765
            MD R++G+D++PLF TL HMME   +DS      NAP++ YVRDAKAMAATPADVKEYPNSYVF+VDMPGLKSGDIKVQVE+DNVLLISGERKREEEK+GAK++RMERRVGKFMRKF LPENAN +AISAVCQDGVLTVTV           KTIEVK+A
Sbjct:    1 MDLRLLGIDNTPLFHTLHHMMEAAGEDSV-----NAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKVA 155          
BLAST of CX053054 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.774e-56
Identity = 113/155 (72.90%), Postives = 131/155 (84.52%), Query Frame = -2
Query:  286 MGLDSSPLFSTLQHMMEMGADDSADNKSSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXKTIEVKIA 750
            M LDS PLF+TL H+M++   D    K+ NAPTRTYVRDAKAMAATPADVKE+PNSYVF+VDMPG+KSGDIKVQVED+NVLLISGERKREEEK+G KY++MERR+GK MRKFVLPENAN+EAISA+ QDGVLTVTV+          KTI+VK+A
Sbjct:    1 MDLDS-PLFNTLHHIMDL--TDDTTEKNLNAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVLTVTVNKLPPPEPKKPKTIQVKVA 152          
BLAST of CX053054 vs. ExPASy Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.289e-53
Identity = 114/160 (71.25%), Postives = 128/160 (80.00%), Query Frame = -2
Query:  289 MDFRIMGLDSSPLFSTLQHMMEMGADDSADNKSSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKRE-EEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXKTIEVKI 765
            MD R+MG D  PLF    H+M+   DD + N  S+AP+RT++ DAKAMAATPADVKEYPNSYVFI+DMPGLKSGDIKVQV+ DNVL ISGERKRE EEK+GAKYVRMERRVGK MRKFVLPENAN E I+AVCQDGVLTVTV+          +TIEVKI
Sbjct:    1 MDLRLMGFDH-PLF---HHIMDYAGDDKSSN--SSAPSRTFMLDAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVLTVTVENVPPPEPKKPRTIEVKI 154          
BLAST of CX053054 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.583e-51
Identity = 104/157 (66.24%), Postives = 126/157 (80.25%), Query Frame = -2
Query:  286 IMGLDSSPLFSTLQHMMEMGADDSADNKSSNA-PTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXKTIEVKIA 753
            +MG D  PL   L +++E   D++  NKS+N+ P+R YVRDA+AMAATPADVKE PNSYVFIVDMPGLKSGDIKVQVE DNVL+ISG+R REEEK+G KYVRMERR+GKFM+KF LPE+AN + ISA+CQDGVLTVTV+          KTI+V++A
Sbjct:    6 LMGFD--PLLRNLHYILEATDDNTTGNKSNNSGPSRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVTVEKLPPPEPKKPKTIQVQVA 160          
BLAST of CX053054 vs. ExPASy Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.318e-49
Identity = 106/167 (63.47%), Postives = 123/167 (73.65%), Query Frame = -2
Query:  286 MDFRIMGLDS----SPLFSTLQHMMEMGAD-DSADNKSSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGER--KREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXKTIEVKIA 765
            MD R  GL +      L ST+Q M++   D D A       P R YVRDAKAMAATPADVKEYPNSYVFI DMPG+K+ +IKVQVEDDNVL++SGER  + ++EKDG KY+RMERRVGKFMRKFVLPENANVEAI+AV QDGVL VTV+          KT+EVK+A
Sbjct:    1 MDLRNFGLSNFGLEPQLLSTIQDMLDFADDHDRAGRAPPEQPIRAYVRDAKAMAATPADVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENANVEAINAVYQDGVLQVTVEKLPPPEPKKPKTVEVKVA 167          
BLAST of CX053054 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.195e-48
Identity = 99/165 (60.00%), Postives = 129/165 (78.18%), Query Frame = -2
Query:  286 MDFRIMGLDSSPLFSTLQHMMEMGADDSA---DNK--SSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXKTIEVKIA 765
            MD  + GL++ PL + LQH++++   D+    DNK  S  + TRTYVRDA+AMAATPADVKE P +Y F+VDMPGL +GDI+VQVED+ VL++SGER+REE +D AKY+RMERR+GKFMRKFVLP+NA+V+ ++AVC+DGVLTVTV+          KTIEVK+A
Sbjct:    1 MDAVMFGLET-PLMAALQHLLDVPDGDAGAGGDNKTGSGGSATRTYVRDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPKTIEVKVA 164          
BLAST of CX053054 vs. ExPASy Swiss-Prot
Match: HSP21_MAIZE (17.5 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.244e-47
Identity = 99/163 (60.74%), Postives = 124/163 (76.07%), Query Frame = -2
Query:  286 MDFRIMGLDSSPLFSTLQHMMEMGADDSA---DNKSSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXKTIEVKIA 765
            MD R+ GL++ PL   LQH++++   D+    D      PTRTYV DA+AMA TPADVKE P +Y F+VDMPGL +GDIKVQVED+ VL+ISGER+REE +D AKY+RMERR+GKFMRKFVLP+NA+++ ISAVC+DGVLTVTV+          KTIEVK+A
Sbjct:    1 MDGRMFGLET-PLMVALQHLLDVPDGDAGAGGDKAGGGGPTRTYVADARAMAVTPADVKELPGAYAFVVDMPGLGTGDIKVQVEDERVLVISGERRREERED-AKYLRMERRMGKFMRKFVLPDNADMDKISAVCRDGVLTVTVEKLPPPEPKKPKTIEVKVA 161          
BLAST of CX053054 vs. ExPASy Swiss-Prot
Match: HSP23_MAIZE (17.0 kDa class II heat shock protein OS=Zea mays GN=HSP18 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.411e-45
Identity = 94/160 (58.75%), Postives = 123/160 (76.88%), Query Frame = -2
Query:  286 MDFRIMGLDSSPLFSTLQHMMEMGADDSADNKSSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXKTIEVKIA 765
            MD R+ GL++ P  + L H++++   D    K+    TRTYVRDA+AMAATPADVKE   +Y F+VDMPGL +GDI+VQVED+ VL+ISGER+REE +D AKY+RMERR+GKFMRKFVLP+NA+V+ ++AVC+DGVLTVTV+          KTIE+K+A
Sbjct:    1 MDARMFGLET-PRVAALHHLLDVPDGD----KAGGGATRTYVRDARAMAATPADVKELAGAYAFVVDMPGLSTGDIRVQVEDERVLVISGERRREERED-AKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPKTIEIKVA 154          
BLAST of CX053054 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.411e-45
Identity = 96/167 (57.49%), Postives = 128/167 (76.65%), Query Frame = -2
Query:  286 MDFRIMGLDSSPLFSTLQHMMEM--GADDSADNK-SSNAPTRTYVRDAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKR----EEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXKTIEVKIA 765
            M+  + GL++ PL + LQH++++  G   +A  + ++  PTR YVRDA+AMAATPADVK+ P +Y F+VDMPGLKS DIKVQVE++ +L+ISGER+R    EE+++  KY+RMERR+GKFMRKFVLP+NA+V+ ISAVCQDGVLTVTV+          KTIEVK+A
Sbjct:    1 MESAMFGLET-PLMTALQHLLDIPDGEGGAAGKQGATGGPTRAYVRDARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVLTVTVEKLPPPEPKKPKTIEVKVA 166          
The following BLAST results are available for this feature:
BLAST of CX053054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
HSP21_SOYBN6.817e-6375.6317.9 kDa class II heat shock protein OS=Glycine ma... [more]
HSP21_SOLPE2.864e-6174.3817.3 kDa class II heat shock protein OS=Solanum pe... [more]
HSP21_PEA2.774e-5672.9017.1 kDa class II heat shock protein OS=Pisum sati... [more]
HSP21_IPONI1.289e-5371.2517.2 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP21_HELAN4.583e-5166.2417.9 kDa class II heat shock protein OS=Helianthus... [more]
HSP22_IPONI7.318e-4963.4718.8 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP22_MAIZE6.195e-4860.0017.8 kDa class II heat shock protein OS=Zea mays P... [more]
HSP21_MAIZE5.244e-4760.7417.5 kDa class II heat shock protein OS=Zea mays P... [more]
HSP23_MAIZE6.411e-4558.7517.0 kDa class II heat shock protein OS=Zea mays G... [more]
HSP18_ORYSJ6.411e-4557.4918.0 kDa class II heat shock protein OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_49F03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-49F03-K6-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX053054 ID=CX053054; Name=CX053054; organism=Citrus sinensis; type=EST; length=790bp
CTTTTTTTTCAGATAAAAGCTGGATTTTTCATTAATTATAACAACTAGAT
GTCTACCAGTAGACGGCCGTCAGCTTCCCCTCCGGAATGCCAAAGACCGA
ACCACAAACCAGTGAACAGAGAGAATTTTGGACAAAAAAGGGAAGAAAGA
GAAAAAAAGAAAAAGGAAGAGGAGATTACAGAGGCATAGTACCGTCAAAC
CCACAAGCAAAATTATTCATAACAACCGGCAAATAGAAAAGACATCAGCA
CCCACAATCCAGCATATTCTCTCTCTCAAAGTTCAAGCAATCTTAACCTC
AATGGTCTTGGGCTTCTTGGGCTCCGGCGGTGGCAGCTTATCGACAGTCA
CAGTCAACACTCCGTCCTGACACACCGCCGAAATGGCTTCAACGTTAGCA
TTCTCAGGCAGCACAAATTTCCTCATAAACTTGCCAACCCTCCTCTCCAT
TCTCACATACTTGGCCCCATCTTTCTCCTCCTCCCGCTTCCTCTCACCGC
TTATGAGCAGCACATTGTCGTCCTCCACTTGGACCTTGATGTCCCCCGAC
TTCAGTCCGGGCATATCGACGATGAACACGTACGAGTTCGGATACTCCTT
CACGTCCGCAGGCGTCGCCGCCATTGCCTTGGCGTCTCTCACGTACGTGC
GCGTCGGCGCGTTGGATGACTTGTTGTCAGCGGAGTCGTCCGCCCCCATC
TCCATCATGTGCTGCAGAGTTGAAAAGAGTGGCGATGAGTCCAAACCCAT
GATTCTGAAATCCATTCTTTTGCGAGTCGGCACGAGGCCT
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