CX052962

Overview
NameCX052962
Unique NameCX052962
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX052962 vs. ExPASy Swiss-Prot
Match: OLEO6_GOSHI (Oleosin 18.2 kDa OS=Gossypium hirsutum GN=MATP6-A PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.704e-35
Identity = 80/134 (59.70%), Postives = 95/134 (70.90%), Query Frame = 1
Query:  127 GPSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXXTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQDIQSKVHEAGGKTGRT 528
            GPS S+VLAVL +LP+GGT LALAG+ L GT+IGL + TPLFIIFS              TGFL+SGAFGLT LSSLS+VL+ LR  TG+     D AK+RV  M +YVGQKTKEVGQ I++K HE  G+ GRT
Sbjct:   37 GPSTSQVLAVLTLLPIGGTLLALAGLTLAGTVIGLMLATPLFIIFSPVLVPAAIAIAMAVTGFLSSGAFGLTGLSSLSYVLNRLRYATGTEQLDLDHAKRRVQDMTEYVGQKTKEVGQKIENKAHE--GQVGRT 168          
BLAST of CX052962 vs. ExPASy Swiss-Prot
Match: OLEO7_GOSHI (Oleosin 16.4 kDa OS=Gossypium hirsutum GN=MATP7 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.257e-33
Identity = 81/163 (49.69%), Postives = 102/163 (62.58%), Query Frame = 1
Query:   31 MAERDRXXXXXXXXXXXXXGKSLMGQRGAAGGGPSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXXTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQDIQSKVHEAGGKT 519
            MA+RDR              + + G R     GPS ++VL VL +LP+GGT LALAG+ LTGT+IGLC+ TPLF+IFS               GFL+SGAFGLT LSSLS+V +  RQ TG+    AD+AK+ +  M  YVGQKTKE GQ I++K HE GG+T
Sbjct:    1 MADRDRSYRTFD--------QVVRGDRTNYQSGPSTTQVLTVLTLLPIGGTLLALAGLTLTGTVIGLCMATPLFVIFSPVLVPAAIAVFMAVAGFLSSGAFGLTGLSSLSYVFNRFRQATGTEQLDADRAKRGMQDMVGYVGQKTKETGQTIENKAHE-GGRT 154          
BLAST of CX052962 vs. ExPASy Swiss-Prot
Match: OLEO5_ARATH (Oleosin 5 OS=Arabidopsis thaliana GN=At3g01570 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.184e-29
Identity = 62/126 (49.21%), Postives = 86/126 (68.25%), Query Frame = 1
Query:  127 GPSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXXTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQDIQSKVHE 504
            GPS+++VLAV   +P+GGT L +AG+ L G++IGL +  PLF+IFS              TGFL SGA GLT LSS+SWVL+ +R+    +PE  ++AK R+A MA+YVGQ+TK+ GQ I+ K H+
Sbjct:   31 GPSSTQVLAVFVGVPIGGTLLTIAGLTLAGSVIGLMLAFPLFLIFSPVIVPAAFVIGLAMTGFLASGAIGLTGLSSMSWVLNYIRRAGQHIPEELEEAKHRLADMAEYVGQRTKDAGQTIEDKAHD 156          
BLAST of CX052962 vs. ExPASy Swiss-Prot
Match: OLEO4_ARATH (Oleosin 20.3 kDa OS=Arabidopsis thaliana GN=OL2 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.321e-29
Identity = 63/127 (49.61%), Postives = 84/127 (66.14%), Query Frame = 1
Query:  127 GPSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXXTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQDIQSKVHEA 507
            GPS +++LA++A +P+GGT L LAG+ L G++IGL V+ PLF++FS              TG L SG FGLT LSS+SWVL+ LR  + +VPE  D AK+R+A    Y G K KE+GQ +Q K HEA
Sbjct:   46 GPSTNQILALIAGVPIGGTLLTLAGLTLAGSVIGLLVSIPLFLLFSPVIVPAALTIGLAVTGILASGLFGLTGLSSVSWVLNYLRGTSDTVPEQLDYAKRRMADAVGYAGMKGKEMGQYVQDKAHEA 172          
BLAST of CX052962 vs. ExPASy Swiss-Prot
Match: OLEO1_SOYBN (P24 oleosin isoform A OS=Glycine max PE=2 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.712e-28
Identity = 69/133 (51.88%), Postives = 85/133 (63.91%), Query Frame = 1
Query:  127 GPSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXXTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKT-------KEVGQDIQSKVHE 504
            GP+ S+VLAVLA LP+GG  L LAG+ L GT+ GL V TPLF++FS               GFLTSGAFGLTALSS SW+L+ +R+   +   +A  AK  +A  A+YVGQKT       KEVGQDIQSK  +
Sbjct:   50 GPTTSQVLAVLAGLPVGGILLLLAGLTLAGTLTGLAVATPLFVLFSPVLVPATVAIGLAVAGFLTSGAFGLTALSSFSWILNYIRETQPASENLAAAAKHHLAEAAEYVGQKTKEVGQKTKEVGQDIQSKAQD 182          
BLAST of CX052962 vs. ExPASy Swiss-Prot
Match: OLES1_BRANA (Oleosin S1-2 OS=Brassica napus GN=S1 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.542e-28
Identity = 61/126 (48.41%), Postives = 87/126 (69.05%), Query Frame = 1
Query:  127 GPSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXXTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQDIQSKVHE 504
            GPS+++VLAV+A +P+GGT L LAG+ L  ++IGL +  PLF+IFS              TGF+ SGA GLT LSS+SWVL+ +R+    +P+  D+AK+R+A MA+Y GQ+TK+ GQ I+ K H+
Sbjct:   31 GPSSTQVLAVVAGVPVGGTLLTLAGLTLAVSVIGLILAFPLFLIFSPVIVPAAFVIGLAMTGFMASGAIGLTGLSSMSWVLNHIRRVRERIPDELDEAKQRLADMAEYAGQRTKDAGQTIEDKAHD 156          
BLAST of CX052962 vs. ExPASy Swiss-Prot
Match: OLES2_BRANA (Oleosin S2-2 OS=Brassica napus GN=S2 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.890e-28
Identity = 61/135 (45.19%), Postives = 87/135 (64.44%), Query Frame = 1
Query:  103 GQRGAAGGGPSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXXTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQDIQSKVHEA 507
            G+      GPS+++++A++  +P+GG+ LALAG+ L G++IGL ++ PLF++FS              T  L SG FGLT LSS+SWVL+ LR  + +VPE  D AK+R+A    Y GQK KE+GQ +Q K HEA
Sbjct:   35 GRADYKSSGPSSNQIVALIVGVPVGGSLLALAGLTLAGSVIGLMLSVPLFLLFSPVIVPAAITIGLAVTAILASGLFGLTGLSSVSWVLNYLRGTSDTVPEQLDYAKRRMADAVGYAGQKGKEMGQYVQDKAHEA 169          
BLAST of CX052962 vs. ExPASy Swiss-Prot
Match: OLEO2_SOYBN (P24 oleosin isoform B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.031e-27
Identity = 69/133 (51.88%), Postives = 84/133 (63.16%), Query Frame = 1
Query:  127 GPSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXXTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKT-------KEVGQDIQSKVHE 504
            GP+ S+VLAV+A LP+GG  L LAG+ L GT+ GL V TPLFIIFS               GFLTSG FGLTALSS SW+L+ +R+   +   +A  AK  +A  A+YVGQKT       KEVGQDIQSK  +
Sbjct:   49 GPTTSQVLAVVAGLPVGGILLLLAGLTLAGTLTGLVVATPLFIIFSPVLIPATVAIGLAVAGFLTSGVFGLTALSSFSWILNYIRETQPASENLAAAAKHHLAEAAEYVGQKTKEVGQKTKEVGQDIQSKAQD 181          
BLAST of CX052962 vs. ExPASy Swiss-Prot
Match: OLEO_HELAN (Oleosin (Fragment) OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.346e-27
Identity = 62/126 (49.21%), Postives = 79/126 (62.70%), Query Frame = 1
Query:  133 SASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXXTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQDIQSKVHEAG 510
            S S+ LA++A+LP+GG  L LA +   GT+IGL + TPLF+IFS              TGFL SG FGLT LSSLS++ +++RQ  GSVPE  D  K  +    +Y GQKTK+ GQ IQS  HE G
Sbjct:   32 STSRTLAIIALLPVGGILLGLAALTFIGTLIGLALATPLFVIFSPIIVPAVLTIGLAVTGFLASGTFGLTGLSSLSYLFNMVRQTAGSVPESLDYVKGTLQDAGEYAGQKTKDFGQKIQSTAHEMG 157          
BLAST of CX052962 vs. ExPASy Swiss-Prot
Match: OLEO2_ARATH (Oleosin 21.2 kDa OS=Arabidopsis thaliana GN=At5g40420 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.139e-26
Identity = 64/143 (44.76%), Postives = 88/143 (61.54%), Query Frame = 1
Query:  103 GQRGAAGGG---------PSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXXTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQDIQSKVHE 504
            G RG  GGG         PS+++VL++L  +P+ G+ LALAG+ L G++IGL V  PLF++FS              TGFL SG FGLT LSS+SWV++ LR    +VPE  + AK+R+A    Y GQK KE+GQ +Q+K  +
Sbjct:   31 GDRGYGGGGYKSMMPESGPSSTQVLSLLIGVPVVGSLLALAGLLLAGSVIGLMVALPLFLLFSPVIVPAALTIGLAMTGFLASGMFGLTGLSSISWVMNYLRGTRRTVPEQLEYAKRRMADAVGYAGQKGKEMGQHVQNKAQD 173          
The following BLAST results are available for this feature:
BLAST of CX052962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
OLEO6_GOSHI8.704e-3559.70Oleosin 18.2 kDa OS=Gossypium hirsutum GN=MATP6-A ... [more]
OLEO7_GOSHI1.257e-3349.69Oleosin 16.4 kDa OS=Gossypium hirsutum GN=MATP7 PE... [more]
OLEO5_ARATH4.184e-2949.21Oleosin 5 OS=Arabidopsis thaliana GN=At3g01570 PE=... [more]
OLEO4_ARATH9.321e-2949.61Oleosin 20.3 kDa OS=Arabidopsis thaliana GN=OL2 PE... [more]
OLEO1_SOYBN2.712e-2851.88P24 oleosin isoform A OS=Glycine max PE=2 SV=2[more]
OLES1_BRANA3.542e-2848.41Oleosin S1-2 OS=Brassica napus GN=S1 PE=1 SV=1[more]
OLES2_BRANA7.890e-2845.19Oleosin S2-2 OS=Brassica napus GN=S2 PE=1 SV=1[more]
OLEO2_SOYBN1.031e-2751.88P24 oleosin isoform B OS=Glycine max PE=2 SV=1[more]
OLEO_HELAN1.346e-2749.21Oleosin (Fragment) OS=Helianthus annuus PE=2 SV=1[more]
OLEO2_ARATH1.139e-2644.76Oleosin 21.2 kDa OS=Arabidopsis thaliana GN=At5g40... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_49A11_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-49A11-A22-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX052962 ID=CX052962; Name=CX052962; organism=Citrus sinensis; type=EST; length=837bp
TCTCTCTTTACTCTTGAATTAAGCATCTCAATGGCTGAACGCGATCGCCC
GCAGCCACACCAGCTTCAAGTGCACCCACAACAGCACGGTAAGTCTCTTA
TGGGCCAAAGAGGAGCAGCAGGAGGAGGCCCTTCAGCAAGCAAAGTTCTT
GCAGTTTTGGCCATGCTGCCCCTCGGTGGAACCTTTCTTGCTCTTGCCGG
TGTCGCGCTGACTGGAACCATCATCGGGCTTTGCGTCACCACTCCTCTCT
TCATAATCTTCAGCCCCGTTATTGTCCCCGCCGCCATTGTTCTTGCTCTT
GCAGTGACTGGGTTTTTAACGTCGGGGGCTTTCGGGCTGACGGCCTTGTC
TTCGCTCTCGTGGGTCCTGAGCATATTGCGGCAGAAGACTGGGTCGGTGC
CGGAGATGGCGGACCAGGCGAAGAAGCGGGTGGCGGGAATGGCGGATTAT
GTGGGCCAGAAGACTAAGGAAGTTGGGCAGGATATTCAGAGTAAGGTTCA
TGAAGCAGGAGGGAAGACGGGGAGGACATAAAATGTTGATCTGATATGAT
CGGTTGATGGGGAAGACAATGTGTGGTTTCTTTTTAGGGCTTTAGTGTTG
GTTTTGTAGTTGTAATAAGTTTTGTGTATTTAGTTGTAGGAGAGTCCGTA
CTCTGTTGTGGCTTGTGAGGTGCAAGGGTTTGGCTCTTGGGCTTACTTGG
AATGCAAGGCATTTGGTGCTTTTGTTTTTGGGTTTAATTATCTAGAATTT
GAATATGCTATGTATTGTCTCAGTTGTTGTCTTGTATCTTCCATTTGCTA
ATTTTAGTCAAATTTGCAAAAAAAAAAAAAAGGGGGG
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