DR403166

Overview
NameDR403166
Unique NameDR403166
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5855 contig Csv1_Contig5855:8..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403166 vs. ExPASy Swiss-Prot
Match: SBP_ARATH (Putative selenium-binding protein OS=Arabidopsis thaliana GN=At4g14030 PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.141e-83
Identity = 143/201 (71.14%), Postives = 171/201 (85.07%), Query Frame = 3
Query:   99 MATDTAVAXHRSSNNG--HGCCAKG-PGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLTTVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGSGFLLLDS*FNVKGRWEKPXHSP 692
            MAT+T V    + +NG   GCC  G PGYATPL AMSGP EKL+YVT +YTGTG +KPDYL TVD DPSS SYS VIHRLP+P++GDELHHSGWNSCSSC+GD+S  RR+LVLPSL+SGRIY +DT++NPRAPSL+K V+P +I  KTGL++PHTAHCLA+G+ILVSCLGD++GNA+G+GFLLLDS FN+K RWEKP HSP
Sbjct:    1 MATETEVVAPVTVSNGGSKGCCKYGGPGYATPLAAMSGPSEKLIYVTAVYTGTGIDKPDYLATVDVDPSSPSYSSVIHRLPMPFVGDELHHSGWNSCSSCHGDASVDRRYLVLPSLISGRIYAIDTKENPRAPSLYKYVDPKEIADKTGLAFPHTAHCLATGEILVSCLGDEEGNAKGNGFLLLDSDFNIKNRWEKPGHSP 201          
BLAST of DR403166 vs. ExPASy Swiss-Prot
Match: SBP1_MOUSE (Selenium-binding protein 1 OS=Mus musculus GN=Selenbp1 PE=1 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 1.350e-61
Identity = 106/176 (60.23%), Postives = 131/176 (74.43%), Query Frame = 3
Query:  153 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLTTVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGSGFLLLDS*FNVKGRWEKP 680
            C   GPGY+TPL+AM GPRE+++Y+ C+Y  TG E PDYL TVD DP S  YS+VIHRLP+PY+ DELHHSGWN+CSSC+GDS+  R  L+LP L+S RIY+VD    PRAP LHKV+E ++I  K  +S  HT+HCLASG+++VS LGD  GN +GS  LL    F VKG WEKP
Sbjct:    5 CTKCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYSQVIHRLPMPYLKDELHHSGWNTCSSCFGDSTKSRNKLILPGLISSRIYVVDVGSEPRAPKLHKVIEASEIQAKCNVSSLHTSHCLASGEVMVSTLGDLQGNGKGSFVLLDGETFEVKGTWEKP 180          
BLAST of DR403166 vs. ExPASy Swiss-Prot
Match: SBP1_RAT (Selenium-binding protein 1 OS=Rattus norvegicus GN=Selenbp1 PE=1 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.303e-61
Identity = 108/177 (61.02%), Postives = 134/177 (75.71%), Query Frame = 3
Query:  153 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLTTVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGSGFLLLD-S*FNVKGRWEKP 680
            C   GPGYATPL+AM GPRE+++Y+ C+Y  TG E PDYL TVD DP S  YS+VIHRLP+P++ DELHHSGWN+CSSC+GDS+  R  L+LPS++S RIY+VD    PRAP LHKV+EP +I  K  L   HT+HCLASG++++S LGD  GN +G GF+LLD   F VKG WEKP
Sbjct:    5 CTKCGPGYATPLEAMKGPREEIVYLPCIYRNTGIEAPDYLATVDVDPKSPHYSQVIHRLPMPHLKDELHHSGWNTCSSCFGDSTKSRDKLILPSIISSRIYVVDVGSEPRAPKLHKVIEPNEIHAKCNLGNLHTSHCLASGEVMISSLGDPQGNGKG-GFVLLDGETFEVKGTWEKP 180          
BLAST of DR403166 vs. ExPASy Swiss-Prot
Match: SBP2_MOUSE (Selenium-binding protein 2 OS=Mus musculus GN=Selenbp2 PE=1 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 3.008e-61
Identity = 105/176 (59.66%), Postives = 130/176 (73.86%), Query Frame = 3
Query:  153 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLTTVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGSGFLLLDS*FNVKGRWEKP 680
            C   GPGY TPL+AM GPRE+++Y+ C+Y  TG E PDYL TVD DP S  YS+VIHRLP+PY+ DELHHSGWN+CSSC+GDS+  R  L+LP L+S RIY+VD    PRAP LHKV+E ++I  K  +S  HT+HCLASG+++V+ LGD  GN +GS  LL    F VKG WEKP
Sbjct:    5 CTKCGPGYPTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYSQVIHRLPMPYLKDELHHSGWNTCSSCFGDSTKSRNKLILPGLISSRIYVVDVGSEPRAPKLHKVIEASEIQAKCNVSNTHTSHCLASGEVMVNTLGDLQGNGKGSFVLLDGETFEVKGTWEKP 180          
BLAST of DR403166 vs. ExPASy Swiss-Prot
Match: SBP1_HUMAN (Selenium-binding protein 1 OS=Homo sapiens GN=SELENBP1 PE=1 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 6.701e-61
Identity = 108/177 (61.02%), Postives = 134/177 (75.71%), Query Frame = 3
Query:  153 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLTTVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGSGFLLLD-S*FNVKGRWEKP 680
            C   GPGY+TPL+AM GPRE+++Y+ C+Y  TG E PDYL TVD DP S  Y +VIHRLP+P + DELHHSGWN+CSSC+GDS+  R  LVLPSL+S RIY+VD    PRAP LHKV+EP DI  K  L++ HT+HCLASG++++S LGD  GN +G GF+LLD   F VKG WE+P
Sbjct:    5 CGNCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKG-GFVLLDGETFEVKGTWERP 180          
BLAST of DR403166 vs. ExPASy Swiss-Prot
Match: SBP1_BOVIN (Selenium-binding protein 1 OS=Bos taurus GN=SELENBP1 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.143e-60
Identity = 109/177 (61.58%), Postives = 135/177 (76.27%), Query Frame = 3
Query:  156 CAK-GPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLTTVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGSGFLLLD-S*FNVKGRWEKP 680
            C K GPGY +PL+AM GPRE+L+Y+ C+Y  TG E PDYL TVD +P S  YS+VIHRLP+P + DELHHSGWN+CSSC+GDS+  R  L+LPSL+S R+Y+VD    PRAP LHKVVEP +I  K  LSY HT+HCLASG++++S LGD  GN +G GF+LLD   F VKG WE+P
Sbjct:    5 CGKCGPGYPSPLEAMKGPREELVYLPCIYRNTGTEAPDYLATVDVNPKSPQYSQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLLLPSLISSRVYVVDVATEPRAPKLHKVVEPEEIHAKCDLSYLHTSHCLASGEVMISALGDPRGNGKG-GFVLLDGETFEVKGTWEQP 180          
BLAST of DR403166 vs. ExPASy Swiss-Prot
Match: SBP1A_XENLA (Selenium-binding protein 1-A OS=Xenopus laevis GN=selenbp1-A PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.143e-60
Identity = 107/175 (61.14%), Postives = 132/175 (75.43%), Query Frame = 3
Query:  153 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLTTVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGSGFLLLD-S*FNVKGRWE 674
            C + GPGY +PLDAM GPRE+++Y+ C+Y  TG  KPDYL TVD DP S SYS+VIHRLP+P + DELHHSGWN+CSSCYGDSS  R  L+LP L+S RIY+VD   +PRAP +HK VEP ++  K GL+ PHT+HCL  G+I++S LGD  GN +G GF+LLD   F VKG WE
Sbjct:    4 CGSCGPGYKSPLDAMKGPREEIVYLPCIYRSTGINKPDYLATVDVDPKSPSYSQVIHRLPMPNVNDELHHSGWNTCSSCYGDSSKVRNKLILPCLISSRIYVVDVGSDPRAPRIHKTVEPYEVFWKCGLANPHTSHCLGCGEIMISSLGDPCGNGKG-GFVLLDGETFEVKGNWE 177          
BLAST of DR403166 vs. ExPASy Swiss-Prot
Match: SBP1B_XENLA (Selenium-binding protein 1-B OS=Xenopus laevis GN=selenbp1-B PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.815e-59
Identity = 105/175 (60.00%), Postives = 131/175 (74.86%), Query Frame = 3
Query:  153 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLTTVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGSGFLLLD-S*FNVKGRWE 674
            C + GPGY +PLDAM GPRE+++Y+ C+Y  TG  KPDYL TVD DP S +YS+VIHRLP+P + DELHHSGWN+CSSCYGDSS  R  L+LP L+S R+Y+VD   +PRAP LHK VEP ++  K GL+  HT+HCL  G+I++S LGD  GN +G GF+LLD   F VKG WE
Sbjct:    4 CGSCGPGYKSPLDAMKGPREEIVYLPCIYRSTGINKPDYLATVDVDPKSPTYSQVIHRLPMPNVNDELHHSGWNTCSSCYGDSSKVRNKLILPCLISSRVYVVDVGTDPRAPRLHKTVEPHEVYWKCGLANLHTSHCLGCGEIMISALGDPCGNGKG-GFVLLDGETFEVKGNWE 177          
BLAST of DR403166 vs. ExPASy Swiss-Prot
Match: SBP1_PONAB (Selenium-binding protein 1 OS=Pongo abelii GN=SELENBP1 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.802e-59
Identity = 106/176 (60.23%), Postives = 133/176 (75.57%), Query Frame = 3
Query:  153 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLTTVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGSGFLLLDS-*FNVKGRWEK 677
            C   GPGY+TPL+AM GPRE+++Y+ C+Y  TG E PDYL TVD DP S  Y +VIHRLP+P + DELHHSGWN+CSSC+GDS+  R  LVLPSL+S RIY+VD    PRA  LHKV+EP DI  K  L++ HT+HCLASG++++S LGD  GN +G GF+LLD+  F VKG WE+
Sbjct:    5 CGNCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRALKLHKVIEPKDIHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKG-GFVLLDAETFEVKGTWER 179          
BLAST of DR403166 vs. ExPASy Swiss-Prot
Match: SBP1_DANRE (Selenium-binding protein 1 OS=Danio rerio GN=selenbp1 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.272e-59
Identity = 104/177 (58.76%), Postives = 131/177 (74.01%), Query Frame = 3
Query:  153 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLTTVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGSGFLLLD-S*FNVKGRWEKP 680
            C   GPGY TPLDAM GPRE+++Y+ C+Y  T  +KPDYL TVD +P S ++ KVIHRLP+P + DELHHSGWN+CSSC+ D S +R  L+LPSL+S RIY+VD   +PRAP LHK VEP D+  K GL+ PHT+HCL SG I++S +GD  GN +G GF+LLD   F V G WE+P
Sbjct:    5 CSGCGPGYKTPLDAMKGPREEIVYLPCIYRNTDIQKPDYLATVDINPQSPNFCKVIHRLPMPNLKDELHHSGWNACSSCFDDPSKRRNRLILPSLISSRIYVVDVGTDPRAPRLHKTVEPTDLFWKCGLANPHTSHCLGSGQIMISTMGDPSGNGKG-GFVLLDGETFEVIGNWEQP 180          
The following BLAST results are available for this feature:
BLAST of DR403166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
SBP_ARATH2.141e-8371.14Putative selenium-binding protein OS=Arabidopsis t... [more]
SBP1_MOUSE1.350e-6160.23Selenium-binding protein 1 OS=Mus musculus GN=Sele... [more]
SBP1_RAT2.303e-6161.02Selenium-binding protein 1 OS=Rattus norvegicus GN... [more]
SBP2_MOUSE3.008e-6159.66Selenium-binding protein 2 OS=Mus musculus GN=Sele... [more]
SBP1_HUMAN6.701e-6161.02Selenium-binding protein 1 OS=Homo sapiens GN=SELE... [more]
SBP1_BOVIN1.143e-6061.58Selenium-binding protein 1 OS=Bos taurus GN=SELENB... [more]
SBP1A_XENLA1.143e-6061.14Selenium-binding protein 1-A OS=Xenopus laevis GN=... [more]
SBP1B_XENLA2.815e-5960.00Selenium-binding protein 1-B OS=Xenopus laevis GN=... [more]
SBP1_PONAB4.802e-5960.23Selenium-binding protein 1 OS=Pongo abelii GN=SELE... [more]
SBP1_DANRE6.272e-5958.76Selenium-binding protein 1 OS=Danio rerio GN=selen... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244A04 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403166 ID=DR403166; Name=DR403166; organism=Citrus sinensis; type=EST; length=696bp
GGGGGTGTGATTGCGTTCTTATCATCCATTCTCTTCCTATCTTGATCTTT
CTTCAAAGTCTTTGTGTTGTTCTGTCTGTGTTTTTTTCTTGCTAATAAAT
GGCAACTGATACTGCGGTGGCTGANCACCGGTCGAGCAATAATGGCCATG
GTTGCTGCGCGAAAGGGCCTGGGTATGCAACTCCACTCGATGCCATGTCT
GGTCCTAGAGAGAAACTTCTCTATGTCACTTGTCTTTACACTGGTACTGG
AAGAGAGAAGCCTGATTACCTAACGACAGTGGATGCGGATCCTAGCTCTT
CTTCTTATTCAAAAGTTATTCATCGGCTCCCTGTGCCATACATTGGCGAT
GAACTACATCATTCGGGATGGAATTCATGTAGCTCATGCTATGGAGATTC
ATCTGCTCAACGGCGTTTTCTTGTCTTGCCTTCTTTGGTATCTGGTCGTA
TATACATAGTTGACACACAAAAAAATCCAAGGGCTCCCTCTTTGCATAAA
GTTGTTGAGCCTGCAGATATTGTACAGAAGACAGGATTATCTTATCCTCA
CACGGCTCATTGCCTTGCTTCTGGTGATATCCTGGTGTCATGCCTTGGAG
ATAAGGATGGAAATGCTGAGGGAAGTGGATTTCTTCTCCTTGACTCATAA
TTCAATGTGAAAGGAAGATGGGAAAAACCANNNCACAGTCCTGCTT
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