CX052841

Overview
NameCX052841
Unique NameCX052841
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX052841 vs. ExPASy Swiss-Prot
Match: OLEO1_PRUDU (Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.666e-40
Identity = 83/102 (81.37%), Postives = 94/102 (92.16%), Query Frame = -2
Query:  286 TAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAEQF 591
            TAGGSLLVLSGL +AGTVIALTIATPLLVI SPVLVPA+ITV+L+ MGFL SGGFGVAA++VLSWIY+YVTG  PPGADQL+QAR KLA KAR+++DRAEQF
Sbjct:   34 TAGGSLLVLSGLVLAGTVIALTIATPLLVIFSPVLVPALITVALITMGFLTSGGFGVAAVTVLSWIYKYVTGKQPPGADQLDQARHKLAGKARDIKDRAEQF 135          
BLAST of CX052841 vs. ExPASy Swiss-Prot
Match: OLEO1_ARATH (Oleosin 18.5 kDa OS=Arabidopsis thaliana GN=At4g25140 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.118e-36
Identity = 73/102 (71.57%), Postives = 91/102 (89.22%), Query Frame = -2
Query:  286 TAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAEQF 591
            TAGGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV+LLI GFL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL SKA++++DRA+ +
Sbjct:   51 TAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDLKDRAQYY 152          
BLAST of CX052841 vs. ExPASy Swiss-Prot
Match: OLEO3_BRANA (Oleosin Bn-III OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.906e-36
Identity = 72/102 (70.59%), Postives = 91/102 (89.22%), Query Frame = -2
Query:  286 TAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAEQF 591
            TAGGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV++LI GFL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL SKA++++DRA+ +
Sbjct:   65 TAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVAMLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDLKDRAQYY 166          
BLAST of CX052841 vs. ExPASy Swiss-Prot
Match: OLEO2_BRANA (Major oleosin NAP-II (Fragment) OS=Brassica napus PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.247e-36
Identity = 72/102 (70.59%), Postives = 89/102 (87.25%), Query Frame = -2
Query:  286 TAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAEQF 591
            TAGGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV+LLI GFL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL  K ++M+DRA+ +
Sbjct:   53 TAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGGKVQDMKDRAQYY 154          
BLAST of CX052841 vs. ExPASy Swiss-Prot
Match: OLEO5_BRANA (Oleosin Bn-V (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.330e-34
Identity = 71/99 (71.72%), Postives = 86/99 (86.87%), Query Frame = -2
Query:  295 TAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRA 591
            TAG SLLVLS LT+ GTVIAL +ATPLLVI SP+LVPA+ITV+LLI GFL+SG FG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL SKA++M+DRA
Sbjct:   53 TAGDSLLVLSSLTLVGTVIALIVATPLLVIFSPILVPALITVALLITGFLSSGAFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDMKDRA 151          
BLAST of CX052841 vs. ExPASy Swiss-Prot
Match: OLEO1_ORYSJ (Oleosin 16 kDa OS=Oryza sativa subsp. japonica GN=OLE16 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 1.973e-33
Identity = 67/100 (67.00%), Postives = 87/100 (87.00%), Query Frame = -2
Query:  292 TAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAE 591
            TAGGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I ++L+  GF+ SGG GVAA+SV SW+Y+Y+TG HPPGADQL+ A+ +LASKAR++++ A+
Sbjct:   40 TAGGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALALMAAGFVTSGGLGVAALSVFSWMYKYLTGKHPPGADQLDHAKARLASKARDIKEAAQ 139          
BLAST of CX052841 vs. ExPASy Swiss-Prot
Match: OLE16_BROSE (Oleosin 16 kDa OS=Bromus secalinus GN=OLE16 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.973e-33
Identity = 67/100 (67.00%), Postives = 87/100 (87.00%), Query Frame = -2
Query:  292 TAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAE 591
            TAGGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I+++L+  GF+ SGG GVAA+SV SW+Y+Y+ G HPPGADQL+ A+ +LASKAR+++D A+
Sbjct:   59 TAGGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAISMALMSAGFVTSGGLGVAAVSVFSWMYKYLAGKHPPGADQLDHAKARLASKARDIKDAAQ 158          
BLAST of CX052841 vs. ExPASy Swiss-Prot
Match: OLEO1_MAIZE (Oleosin Zm-I OS=Zea mays GN=OLE16 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.670e-32
Identity = 66/100 (66.00%), Postives = 85/100 (85.00%), Query Frame = -2
Query:  292 TAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAE 591
            T GGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I ++L+  GF+ SGG GVAA+SV SW+Y+Y+TG HPP ADQL+ A+ +LASKAR+++D A+
Sbjct:   48 TFGGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALALMAAGFVTSGGLGVAALSVFSWMYKYLTGKHPPAADQLDHAKARLASKARDVKDAAQ 147          
BLAST of CX052841 vs. ExPASy Swiss-Prot
Match: OLEO3_ARATH (Oleosin 14.9 kDa OS=Arabidopsis thaliana GN=OL3 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 7.016e-31
Identity = 66/96 (68.75%), Postives = 84/96 (87.50%), Query Frame = -2
Query:  304 TAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMR 591
            TAGGSLLVLSGLT+AGTVIALT+ATPLLVI SPVLVPAV+TV+L+I GFLASGGFG+AAI+  SW+YR++TG    G+D++E ARMK+ S+ ++ +
Sbjct:   35 TAGGSLLVLSGLTLAGTVIALTVATPLLVIFSPVLVPAVVTVALIITGFLASGGFGIAAITAFSWLYRHMTGS---GSDKIENARMKVGSRVQDTK 127          
BLAST of CX052841 vs. ExPASy Swiss-Prot
Match: OLEO1_SOYBN (P24 oleosin isoform A OS=Glycine max PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.982e-17
Identity = 43/99 (43.43%), Postives = 61/99 (61.62%), Query Frame = -2
Query:  289 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAEQ 585
            GG LL+L+GLT+AGT+  L +ATPL V+ SPVLVPA + + L + GFL SG FG+ A+S  SWI  Y+    P   +    A+  LA  A  +  + ++
Sbjct:   66 GGILLLLAGLTLAGTLTGLAVATPLFVLFSPVLVPATVAIGLAVAGFLTSGAFGLTALSSFSWILNYIRETQPASENLAAAAKHHLAEAAEYVGQKTKE 164          
The following BLAST results are available for this feature:
BLAST of CX052841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
OLEO1_PRUDU1.666e-4081.37Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1[more]
OLEO1_ARATH1.118e-3671.57Oleosin 18.5 kDa OS=Arabidopsis thaliana GN=At4g25... [more]
OLEO3_BRANA1.906e-3670.59Oleosin Bn-III OS=Brassica napus PE=2 SV=1[more]
OLEO2_BRANA4.247e-3670.59Major oleosin NAP-II (Fragment) OS=Brassica napus ... [more]
OLEO5_BRANA2.330e-3471.72Oleosin Bn-V (Fragment) OS=Brassica napus PE=2 SV=... [more]
OLEO1_ORYSJ1.973e-3367.00Oleosin 16 kDa OS=Oryza sativa subsp. japonica GN=... [more]
OLE16_BROSE1.973e-3367.00Oleosin 16 kDa OS=Bromus secalinus GN=OLE16 PE=2 S... [more]
OLEO1_MAIZE1.670e-3266.00Oleosin Zm-I OS=Zea mays GN=OLE16 PE=2 SV=2[more]
OLEO3_ARATH7.016e-3168.75Oleosin 14.9 kDa OS=Arabidopsis thaliana GN=OL3 PE... [more]
OLEO1_SOYBN1.982e-1743.43P24 oleosin isoform A OS=Glycine max PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_48D02_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-48D02-G3-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX052841 ID=CX052841; Name=CX052841; organism=Citrus sinensis; type=EST; length=595bp
TTTTTTTTTTTTTTTTTAAGACATATTACATTTCAAAGACCAATAATAAA
AACCCTGCAAGAGCGCCCCACCACATTAACAAAACTTATTACAAAGATTA
CCACGAATACAAAAAAGGAAAAAACACATTGACACAAATTAACACAAAAG
ACAACCAATGACCCCTCAACTAGTATCATAGCCGTTTGATCTCCACCCAT
ATCTTTATCAACCAACAACCCTTCATCACATGCATAACTACGTAGTTTAA
GAACCCGGCTGCGAGCCAGTGCTTTGCTGCTGCCCAAACTGCTCAGCCCT
GTCCCTCATCTCCCTAGCCTTACTGGCCAGCTTCATCCGCGCCTGCTCCA
GCTGATCCGCCCCTGGTGGGTGCCCCCCTGTGACATACCTATAAATCCAT
GATAAGACGCTGATGGCTGCTACACCGAATCCGCCAGAGGCCAAGAACCC
CATGATGAGAAGAGAAACGGTGATAACCGCAGGGACAAGAACAGGACTAC
ATATGACTAGCAGTGGAGTAGCAATGGTCAGTGCAATGACAGTCCCAGCC
ATGGTTAAGCCAGAGAGGACCAACAGAGACCCACCGGCTGTGCCT
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