EY680474

Overview
NameEY680474
Unique NameEY680474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY680474 vs. ExPASy Swiss-Prot
Match: PEPK2_ARATH (Serine/threonine-protein kinase PEPKR2 OS=Arabidopsis thaliana GN=PEPKR2 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.359e-48
Identity = 103/175 (58.86%), Postives = 129/175 (73.71%), Query Frame = 1 
Query:   34 GDSLEAVFDAITNVKLDFHSGVWETVSKPARDLMARMLTRDVSARITADEVLRHPWILFYTERTLRTLTIKSKLKNQVGASHHHPAILSGVESDENKIDRGSRNDXXXXXXXXXXXXXXXXVQDEGGFVDALAVAISNVRISEPKRSRLCGP-SGPIEQQCSSNLTA-NTLCRAF 552
            GDSL+A+F+AI NVKLDF++GVWE+VSKPARDL+ARMLTR+ SARITADEVLRHPWILFYT+RTL+T+ IKSK K+Q G+S     + +   +++  ++R  R                   +DE G VD L VAI+NVRISEPKRSR+C P + PIEQQ SSNLT+ +TLCRAF
Sbjct:  299 GDSLDAIFEAIKNVKLDFNTGVWESVSKPARDLLARMLTREESARITADEVLRHPWILFYTDRTLKTMCIKSKHKSQAGSS---TCLQNRSPTEKTDLNRADREKKIPSDSPTDSFSNTEEEEDESGVVDVLVVAIANVRISEPKRSRVCSPTNNPIEQQHSSNLTSTSTLCRAF 470
The following BLAST results are available for this feature:
BLAST of EY680474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PEPK2_ARATH2.359e-4858.86Serine/threonine-protein kinase PEPKR2 OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-011-E01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680474 ID=EY680474; Name=EY680474; organism=Citrus sinensis; type=EST; length=837bp
CCACGCGTCCGCCCACGCGTCCGACCTTCTTAAGGAGATTCCTTAGAAGC
AGTTTTTGACGCTATCACCAATGTAAAGCTAGATTTCCACTCAGGGGTAT
GGGAGACAGTATCAAAACCTGCAAGGGACCTGATGGCGAGAATGCTGACA
CGGGATGTATCAGCTAGGATAACAGCTGATGAAGTGCTAAGGCATCCGTG
GATATTGTTCTACACAGAACGCACGTTAAGAACATTAACCATCAAGTCAA
AGTTGAAGAACCAAGTTGGAGCATCTCACCATCACCCAGCCATTCTTTCT
GGAGTGGAGTCAGATGAAAATAAGATAGATCGTGGCTCTCGTAATGACGA
ATCGCATGCGCTTTCATCATCCGAAAGTTTGAATAGTGAGTCAGAGGTGC
AAGATGAAGGTGGTTTCGTGGATGCACTAGCAGTGGCCATCTCCAATGTG
AGAATTTCGGAGCCAAAGAGGAGCAGACTTTGTGGTCCCTCTGGCCCAAT
AGAGCAGCAGTGTTCATCTAATTTGACGGCTAACACTCTGTGTAGAGCAT
TTTGATCCTGCTGACAAACTGACACTGATAACATCCTTCTCTCCACTGTT
TTTTGAGCCTGGGGTTTTGAATTTTACCCTGCCCTGGTACAATCCTTCAG
TGGCAGACGATGGCTTAAAGGTCACAATAACCACCTCTGGGTAACTGCAG
TGCCATCTCTTAACCAAGGGCAAAAAAAAGGAACAAAGGTTTAACTTTTT
TTTTTCGTTTTCTGGTTAAATTTTGCTTAACCAAAAAATTCATTTTCAAC
CCGGGATAACAGAAATTTTCCATAAGACAAAATAGGG
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