EY668170

Overview
NameEY668170
Unique NameEY668170
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY668170 vs. ExPASy Swiss-Prot
Match: KPPR_MESCR (Phosphoribulokinase, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 382.489 bits (981), Expect = 1.747e-105
Identity = 198/254 (77.95%), Postives = 213/254 (83.86%), Query Frame = 1
Query:   91 PTHTHLGFFNNQRQLAVFYNKRXXXXXXXXXXKQRGCLVITCSAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISETTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQREMTERGHSLESIQASIGARKADFDAYIDPQSNLLVAGLEGLQPH*FPDDNE 852
            PT +HLGF  NQ++   F NK             R C VITC AGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPP+GGNPDSNTLIS+TTTVICLDDYHSLDRTGRKEKGVTALDPRAN+FDLMYEQVKA+K+G +VEKPIYNHVTGLLD PELIKPPKILVIEGLHPM+D+RVR+LLDFSIYLDISNEVKFAWKIQR+M ERGHSLESI+ASI ARK DFDAYIDPQ     A +E L     P DNE
Sbjct:    9 PTTSHLGF--NQKKQLFFCNKSAYKRVSF---SSRPC-VITCLAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPRGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKALKEGKAVEKPIYNHVTGLLDAPELIKPPKILVIEGLHPMFDSRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPGDNE 256          
BLAST of EY668170 vs. ExPASy Swiss-Prot
Match: KPPR_SPIOL (Phosphoribulokinase, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 370.163 bits (949), Expect = 8.973e-102
Identity = 190/260 (73.08%), Postives = 211/260 (81.15%), Query Frame = 1
Query:   76 CSLYS-PTHTHLGFFNNQRQLAVFYNKRXXXXXXXXXXKQRGCLVITCSAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISETTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQREMTERGHSLESIQASIGARKADFDAYIDPQSNLLVAGLEGLQPH*FPDDNE 852
            C++Y+ PT THLG   NQ    VF+N +            R   VITCS    QTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLIS+TTTVICLDD+HSLDR GRK + VTALDP+AN+FDLMYEQVKA+K+G +V+KPIYNHV+GLLDPPELI+PPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQR+M ERGHSLESI+ASI +RK DFDAYIDPQ       +E L     PDD+E
Sbjct:    4 CTVYTIPTTTHLGSSFNQNNKQVFFNYKRSSSSNNTLFTTRPSYVITCS--QQQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDFHSLDRNGRKVEKVTALDPKANDFDLMYEQVKALKEGKAVDKPIYNHVSGLLDPPELIQPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMKERGHSLESIKASIESRKPDFDAYIDPQKQHADVVIEVLPTELIPDDDE 261          
BLAST of EY668170 vs. ExPASy Swiss-Prot
Match: KPPR_WHEAT (Phosphoribulokinase, chloroplastic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 4.168e-99
Identity = 189/264 (71.59%), Postives = 206/264 (78.03%), Query Frame = 1
Query:   61 SLNSPCSLYSPTHTHLGFFNNQRQLAVFYNKRXXXXXXXXXXKQRGCLVITCSAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISETTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQREMTERGHSLESIQASIGARKADFDAYIDPQSNLLVAGLEGLQPH*FPDDNE 852
            SL SPC+    T  + GF  NQ    +F+  R           + G      S    Q IVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLIS+TTTVICLDDYHSLDRTGRKEKGVTALDP+AN+FDLMYEQVKA+K+G ++EKPIYNHVTGLLDP ELI+PPKI VIEGLHPMYD RVRELLDFSIYLDISNEVKFAWKIQR+M ERGHSLESI+ASI ARK DFDA+IDPQ     A +E L     PDDNE
Sbjct:   11 SLRSPCT----TIPNSGFRQNQ---VIFFTTRSSRRSNT----RHGARTFQVSCAVEQPIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPKANDFDLMYEQVKAIKEGKAIEKPIYNHVTGLLDPAELIQPPKIFVIEGLHPMYDERVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAFIDPQKQYADAVIEVLPTQLIPDDNE 263          
BLAST of EY668170 vs. ExPASy Swiss-Prot
Match: KPPR_ARATH (Phosphoribulokinase, chloroplastic OS=Arabidopsis thaliana GN=At1g32060 PE=1 SV=1)

HSP 1 Score: 353.599 bits (906), Expect = 8.691e-97
Identity = 176/216 (81.48%), Postives = 194/216 (89.81%), Query Frame = 1
Query:  205 VITCSAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISETTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQREMTERGHSLESIQASIGARKADFDAYIDPQSNLLVAGLEGLQPH*FPDDNE 852
            +ITC+    +TIVIGLAADSGCGKSTFMRRLTSVFGGAA+PPKGGNPDSNTLIS+TTTVICLDDYHSLDR GRKE+ VTALDPRAN+FDLMYEQVKA+K+G++VEKPIYNHVTGLLDPPELI+PPKILVIEGLHPM+D RVR+LLDFSIYLDISNEVKFAWKIQR+M ERGHSLESI+ASI ARK DFDA+IDPQ     A +E L     PDDNE
Sbjct:   43 LITCA---QETIVIGLAADSGCGKSTFMRRLTSVFGGAAKPPKGGNPDSNTLISDTTTVICLDDYHSLDRYGRKEQKVTALDPRANDFDLMYEQVKALKNGIAVEKPIYNHVTGLLDPPELIQPPKILVIEGLHPMFDERVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAFIDPQKQYADAVIEVLPTTLIPDDNE 255          
BLAST of EY668170 vs. ExPASy Swiss-Prot
Match: KPPR_CHLRE (Phosphoribulokinase, chloroplastic OS=Chlamydomonas reinhardtii GN=PRKA PE=1 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 9.329e-83
Identity = 150/209 (71.77%), Postives = 170/209 (81.34%), Query Frame = 1
Query:  220 AGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISETTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQREMTERGHSLESIQASIGARKADFDAYIDPQSNLLVAGLEGLQPH*FPDD 846
            A   +T+VIGLAADSGCGKSTFMRR+TS+FGG  +PP GGNPDSNTLIS+ TTVICLDDYH LDR GRK KGVTAL P A NFDLMY QVKA+K+G SV+KPIYNHV+GL+D PE I+ P ILVIEGLHP YD RV ELLDF IYLDIS+++KFAWKIQR+M ERGHSLESI++SI ARK DFDAYIDPQ       ++ L     PDD
Sbjct:   31 ADKDKTVVIGLAADSGCGKSTFMRRMTSIFGGVPKPPAGGNPDSNTLISDMTTVICLDDYHCLDRNGRKVKGVTALAPEAQNFDLMYNQVKALKEGKSVDKPIYNHVSGLIDAPEKIESPPILVIEGLHPFYDKRVAELLDFKIYLDISDDIKFAWKIQRDMAERGHSLESIKSSIAARKPDFDAYIDPQKKDADMIIQVLPTQLVPDD 239          
BLAST of EY668170 vs. ExPASy Swiss-Prot
Match: KPPR_SYNY3 (Phosphoribulokinase OS=Synechocystis sp. (strain PCC 6803) GN=prk PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 7.934e-66
Identity = 122/186 (65.59%), Postives = 141/186 (75.81%), Query Frame = 1
Query:  232 QTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISETTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQREMTERGHSLESIQASIGARKADFDAYIDPQ 789
            + ++IG+A DSGCGKSTF+RRLT +FG                  E  TVICLDDYHSLDR GRK  GVTALDPRANNFDLMYEQ+K +K G S+ KPIYNH TGLLDPPE ++P K++VIEGLHP+YD RVREL+DF +YLDIS EVK  WKIQR+M ERGH+ E I ASI ARK DF AYI+PQ
Sbjct:    7 RVVLIGVAGDSGCGKSTFLRRLTDLFG-----------------EEFMTVICLDDYHSLDRQGRKAAGVTALDPRANNFDLMYEQIKTLKSGQSIMKPIYNHETGLLDPPEKVEPNKVVVIEGLHPLYDERVRELVDFGVYLDISEEVKINWKIQRDMAERGHTYEDILASINARKPDFTAYIEPQ 175          
BLAST of EY668170 vs. ExPASy Swiss-Prot
Match: KPPR_VITSX (Phosphoribulokinase, chloroplastic (Fragments) OS=Vitis sp. PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.984e-25
Identity = 57/66 (86.36%), Postives = 60/66 (90.91%), Query Frame = 1
Query:  295 LTSVFGGAAEPPKGGNPDSNTLISETTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVK 492
            LTSVFGGAAEPP+GGNPDSNTLIS+TTTVICLDDYHSLDR      GVTALDPRAN+FDLMYEQVK
Sbjct:    1 LTSVFGGAAEPPRGGNPDSNTLISDTTTVICLDDYHSLDR------GVTALDPRANDFDLMYEQVK 60          
BLAST of EY668170 vs. ExPASy Swiss-Prot
Match: URK_BORRA (Uridine kinase OS=Borrelia recurrentis (strain A1) GN=udk PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.087e-14
Identity = 51/184 (27.72%), Postives = 96/184 (52.17%), Query Frame = 1
Query:  241 VIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISETTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLL-DPPELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQREMTERGHSLES-IQASIGARKADFDAYIDP 786
            +IG++  SG GK+T + +++ V                  ISE   +   + Y S+     +   V    P A + +L Y+Q+K +K+  S+  P+Y+ +     D    I P  I+++EG+    + RVR L+D  IY+D  N+++F  +++R+M++RG +LES I+  +   +A +  +I+P
Sbjct:    4 IIGISGGSGSGKTTIVNKISEV------------------ISEFVLISQDNYYKSVGDYEYEFLDVNFDHPDAFDNNLFYKQLKKLKENQSINMPLYDFINHKRRDETIKIVPTPIIIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLERDMSKRGRTLESVIEQYLRTTRAGYYRFIEP 169          
BLAST of EY668170 vs. ExPASy Swiss-Prot
Match: URK_BORDL (Uridine kinase OS=Borrelia duttonii (strain Ly) GN=udk PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.087e-14
Identity = 51/184 (27.72%), Postives = 96/184 (52.17%), Query Frame = 1
Query:  241 VIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISETTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLL-DPPELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQREMTERGHSLES-IQASIGARKADFDAYIDP 786
            +IG++  SG GK+T + +++ V                  ISE   +   + Y S+     +   V    P A + +L Y+Q+K +K+  S+  P+Y+ +     D    I P  I+++EG+    + RVR L+D  IY+D  N+++F  +++R+M++RG +LES I+  +   +A +  +I+P
Sbjct:    4 IIGISGGSGSGKTTIVNKISEV------------------ISEFVLISQDNYYKSVGDYEYEFLDVNFDHPDAFDNNLFYKQLKKLKENQSINMPLYDFINHKRRDETIKIVPTPIIIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLERDMSKRGRTLESVIEQYLRTTRAGYYRFIEP 169          
BLAST of EY668170 vs. ExPASy Swiss-Prot
Match: URK_BORHD (Uridine kinase OS=Borrelia hermsii (strain DAH) GN=udk PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.397e-14
Identity = 50/184 (27.17%), Postives = 94/184 (51.09%), Query Frame = 1
Query:  241 VIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISETTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLL-DPPELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQREMTERGHSLES-IQASIGARKADFDAYIDP 786
            +IG+A  SG GK+T + +++ V                 LIS+      + DY        +   V    P A + +L Y+Q+K +K+   +  P+Y+ +     D    I P  ++++EG+    + RVR L+D  IY+D  N+++F  +++R+M++RG +LES I+  +   +A +  +I+P
Sbjct:    4 IIGIAGGSGSGKTTIVNKISEVI------------PEFVLISQDNYYKSVGDYEY------EFLDVNFDHPDAFDNNLFYKQLKKIKENKLIHMPLYDFINHRRKDETVEIVPTPVVIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLERDMSKRGRTLESVIEQYLSTTRAGYYRFIEP 169          
The following BLAST results are available for this feature:
BLAST of EY668170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
KPPR_MESCR1.747e-10577.95Phosphoribulokinase, chloroplastic OS=Mesembryanth... [more]
KPPR_SPIOL8.973e-10273.08Phosphoribulokinase, chloroplastic OS=Spinacia ole... [more]
KPPR_WHEAT4.168e-9971.59Phosphoribulokinase, chloroplastic OS=Triticum aes... [more]
KPPR_ARATH8.691e-9781.48Phosphoribulokinase, chloroplastic OS=Arabidopsis ... [more]
KPPR_CHLRE9.329e-8371.77Phosphoribulokinase, chloroplastic OS=Chlamydomona... [more]
KPPR_SYNY37.934e-6665.59Phosphoribulokinase OS=Synechocystis sp. (strain P... [more]
KPPR_VITSX3.984e-2586.36Phosphoribulokinase, chloroplastic (Fragments) OS=... [more]
URK_BORRA1.087e-1427.72Uridine kinase OS=Borrelia recurrentis (strain A1)... [more]
URK_BORDL1.087e-1427.72Uridine kinase OS=Borrelia duttonii (strain Ly) GN... [more]
URK_BORHD5.397e-1427.17Uridine kinase OS=Borrelia hermsii (strain DAH) GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-041-C04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY668170 ID=EY668170; Name=EY668170; organism=Citrus sinensis; type=EST; length=886bp
GTACGNNGTCGGATTCCGGGTCGACCCACGCGTCCGCCCACGCGTCCGAA
AATGCCCTTTTCCCTCAACTCACCATGCTCTCTTTACTCGCCAACACATA
CCCACTTGGGTTTTTTCAACAACCAAAGACAACTAGCGGTTTTTTACAAC
AAGAGAAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAAGCAGAGAGGATG
TCTTGTGATAACATGCTCAGCAGGTGACTCACAGACAATTGTGATTGGTC
TGGCGGCAGACTCGGGGTGTGGCAAGAGCACTTTCATGAGGAGACTAACA
AGCGTCTTTGGTGGAGCAGCAGAGCCACCAAAGGGCGGCAACCCTGATTC
AAACACTCTCATCAGTGAAACCACCACTGTGATTTGCTTAGATGATTATC
ACTCGCTTGACAGAACTGGAAGAAAAGAAAAGGGTGTCACTGCACTTGAT
CCTAGAGCCAACAATTTTGATCTTATGTATGAACAGGTTAAGGCTATGAA
AGATGGAGTGTCTGTTGAAAAGCCCATTTACAATCATGTCACCGGTCTCT
TGGACCCCCCCGAGCTCATCAAGCCCCCCAAGATCCTTGTCATTGAAGGC
TTGCACCCAATGTATGATGCTCGGGTGAGAGAGCTCTTGGACTTTAGTAT
CTATTTGGACATTAGCAATGAGGTTAAATTTGCATGGAAAATTCAGAGAG
AAATGACAGAGCGAGGACACAGTCTTGAGAGCATCCAGGCTAGTATTGGA
GCCCGAAAAGCAGATTTTGATGCCTATATTGATCCCCAAAGCAATTTGTT
GGTGGCGGGGTTGGAAGGGTTACAACCCCATTGATTTCCGGATGATAATG
AAGGGAAGGGGTTTGGAAAGTAGGGGGGTTCTGGAA
back to top