EY667985
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY667985 vs. ExPASy Swiss-Prot
Match: SEH1_XENTR (Nucleoporin seh1 OS=Xenopus tropicalis GN=seh1l PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.532e-18 Identity = 58/202 (28.71%), Postives = 92/202 (45.54%), Query Frame = 1 Query: 55 KVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQ-LNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVTWALNFGRPYDVIAVA 642 K H+G++ +V W PEFG +A D + +WEEIV ++ W + + T V DV+F L L +DG V++YE D + L W LQ E K SC + ISWNP +G + +P + +++E++E ++ L SD V+ + +A N GR + ++AVA Sbjct: 54 KTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS---------CKLSC--SCISWNPSSSRAHSPMIAVGSDDSSPNIMGKVQIYEYNENTRKYAKAETLM---SVSDPVHDIAFAPNLGRSFHILAVA 241
BLAST of EY667985 vs. ExPASy Swiss-Prot
Match: SEH1B_XENLA (Nucleoporin seh1-B OS=Xenopus laevis GN=seh1l-B PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.532e-18 Identity = 58/202 (28.71%), Postives = 92/202 (45.54%), Query Frame = 1 Query: 55 KVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQ-LNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVTWALNFGRPYDVIAVA 642 K H+G++ +V W PEFG +A D + +WEEIV ++ W + + T V DV+F L L +DG V++YE D + L W LQ E K SC + ISWNP +G + +P + +++E++E ++ L SD V+ + +A N GR + ++AVA Sbjct: 54 KTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS---------CKLSC--SCISWNPSSSRAHSPMIAVGSDDSSPNIMGKVQIYEYNENTRKYAKAETLM---SVSDPVHDIAFAPNLGRSFHILAVA 241
BLAST of EY667985 vs. ExPASy Swiss-Prot
Match: SEH1A_XENLA (Nucleoporin seh1-A OS=Xenopus laevis GN=seh1l-A PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.532e-18 Identity = 58/202 (28.71%), Postives = 92/202 (45.54%), Query Frame = 1 Query: 55 KVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQ-LNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVTWALNFGRPYDVIAVA 642 K H+G++ +V W PEFG +A D + +WEEIV ++ W + + T V DV+F L L +DG V++YE D + L W LQ E K SC + ISWNP +G + +P + +++E++E ++ L SD V+ + +A N GR + ++AVA Sbjct: 54 KTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS---------CKLSC--SCISWNPSSSRAHSPMIAVGSDDSSPNIMGKVQIYEYNENTRKYAKAETLM---SVSDPVHDIAFAPNLGRSFHILAVA 241
BLAST of EY667985 vs. ExPASy Swiss-Prot
Match: SEH1_OSMMO (Nucleoporin seh1 OS=Osmerus mordax GN=seh1l PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.010e-17 Identity = 60/202 (29.70%), Postives = 93/202 (46.04%), Query Frame = 1 Query: 55 KVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQ-----WKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGF-NSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVTWALNFGRPYDVIAVA 642 K H+G++ +V W PEFG +A D + +WEEIV ++ Q W + + T V DV+F L L +DG V++YE D + L W LQ E K SC + ISWNP +G +S+T +++E+ E ++ V L +D V+ + +A N GR + V+A+A Sbjct: 54 KTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEIS---------CKLSC--SCISWNPSSSRAHSPMIAVGSDDSNTAYSGKVQIYEYVENTRKYAKVETLMTV---TDPVHDIAFAPNLGRSFHVLAIA 241
BLAST of EY667985 vs. ExPASy Swiss-Prot
Match: SEH1_PONAB (Nucleoporin SEH1 OS=Pongo abelii GN=SEH1L PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.938e-17 Identity = 56/202 (27.72%), Postives = 92/202 (45.54%), Query Frame = 1 Query: 55 KVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQ-LNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVTWALNFGRPYDVIAVA 642 K H+G++ +V W PEFG +A D + +WEEIV ++ W + + T V DV+F L L +DG V++YE D + L W LQ E K SC + ISWNP +G + +P + +++E++E ++ L +D V+ + +A N GR + ++A+A Sbjct: 54 KTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS---------CKLSC--SCISWNPSSSRAHSPMIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTV---TDPVHDIAFAPNLGRSFHILAIA 241
BLAST of EY667985 vs. ExPASy Swiss-Prot
Match: SEH1_HUMAN (Nucleoporin SEH1 OS=Homo sapiens GN=SEH1L PE=1 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 2.938e-17 Identity = 56/202 (27.72%), Postives = 92/202 (45.54%), Query Frame = 1 Query: 55 KVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQ-LNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVTWALNFGRPYDVIAVA 642 K H+G++ +V W PEFG +A D + +WEEIV ++ W + + T V DV+F L L +DG V++YE D + L W LQ E K SC + ISWNP +G + +P + +++E++E ++ L +D V+ + +A N GR + ++A+A Sbjct: 54 KTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS---------CKLSC--SCISWNPSSSRAHSPMIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTV---TDPVHDIAFAPNLGRSFHILAIA 241
BLAST of EY667985 vs. ExPASy Swiss-Prot
Match: SEH1_BOVIN (Nucleoporin SEH1 OS=Bos taurus GN=SEH1L PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.938e-17 Identity = 56/202 (27.72%), Postives = 92/202 (45.54%), Query Frame = 1 Query: 55 KVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQ-LNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVTWALNFGRPYDVIAVA 642 K H+G++ +V W PEFG +A D + +WEEIV ++ W + + T V DV+F L L +DG V++YE D + L W LQ E K SC + ISWNP +G + +P + +++E++E ++ L +D V+ + +A N GR + ++A+A Sbjct: 54 KTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS---------CKLSC--SCISWNPSSSRAHAPMIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLLTV---TDPVHDIAFAPNLGRSFHILAIA 241
BLAST of EY667985 vs. ExPASy Swiss-Prot
Match: SEH1_MOUSE (Nucleoporin SEH1 OS=Mus musculus GN=Seh1l PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.116e-16 Identity = 58/202 (28.71%), Postives = 92/202 (45.54%), Query Frame = 1 Query: 55 KVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQ-----PLQWKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTP-QLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVTWALNFGRPYDVIAVA 642 K H+G++ +V W PEFG +A D + +WEEIV ++ W + + T V DV+F L L +DG V+VYE D + L W LQ E V+ SC ISWNP +G + +P + +++E++E ++ L +D V+ + +A N GR + ++AVA Sbjct: 54 KTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRVYEAPDVMNLSQWSLQHE-------VSCKLCCSC----ISWNPSSSRAHPPMIAVGSDDSSPNSMAKVQIFEYNENTRKYAKAETLMTV---TDPVHDIAFAPNLGRSFHILAVA 241
BLAST of EY667985 vs. ExPASy Swiss-Prot
Match: SEH1_DANRE (Nucleoporin seh1 OS=Danio rerio GN=seh1l PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 7.236e-16 Identity = 60/203 (29.56%), Postives = 91/203 (44.83%), Query Frame = 1 Query: 55 KVHAGAILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQ-----WKLCKSFESTSTQVLDVQFGVSSTSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKGENQGSSFVLGFNSDTPQLNSSKV--WEFDEAHNRWLPVAELALPEDRSDEVYAVTWALNFGRPYDVIAVA 642 K H+G++ +V W PEFG +A D + +WEEIV ++ Q W + + T V DV+F L L +DG V++YE D + L W LQ E K +C + ISWNP +G D+ S KV E++E ++ L +D V+ + +A N GR + V+A+A Sbjct: 54 KTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEIS---------CKLAC--SCISWNPSSSRAHPPMIAVG-GDDSNGAYSGKVQIHEYNENTRKYAKAETLMTV---TDPVHDIAFAPNLGRSFHVLAIA 241 The following BLAST results are available for this feature:
BLAST of EY667985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY667985 ID=EY667985; Name=EY667985; organism=Citrus sinensis; type=EST; length=864bpback to top |