EY667929

Overview
NameEY667929
Unique NameEY667929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_PETHY (Triosephosphate isomerase, cytosolic OS=Petunia hybrida GN=TPIP1 PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 4.111e-74
Identity = 128/169 (75.74%), Postives = 140/169 (82.84%), Query Frame = 3
Query:   54 EEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVH 560
            EEVKKI++ LN                   FL LVK+ LRP FHVAAQNCWVKKGGAFTGE+SAEMLVNL IPWVILGHSERR +L E NEFVGDKVAYALSQGLKVIACVGETLE+RE+GSTM+VVAAQTKAIADRV  W+N+V+AYEPVWAIGTGKVA+PAQAQEVH
Sbjct:   18 EEVKKILATLNAADVPSQDVVEVVVSPPYVFLPLVKNELRPDFHVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLGESNEFVGDKVAYALSQGLKVIACVGETLEERESGSTMDVVAAQTKAIADRVKDWTNVVVAYEPVWAIGTGKVASPAQAQEVH 186          

HSP 2 Score: 43.1282 bits (100), Expect = 4.111e-74
Identity = 25/45 (55.56%), Postives = 27/45 (60.00%), Query Frame = 2
Query:  575 KWLLANPSPEIAAATRIFYGGIRKMGATGKELAAPP*C*QQFVGG 709
            KWL AN SPE+AA+TRI YGG    GA  KEL   P      VGG
Sbjct:  191 KWLAANVSPEVAASTRIIYGG-SVNGANCKELGGQPDVDGFLVGG 234          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_MAIZE (Triosephosphate isomerase, cytosolic OS=Zea mays PE=3 SV=3)

HSP 1 Score: 258.07 bits (658), Expect = 4.488e-73
Identity = 128/169 (75.74%), Postives = 141/169 (83.43%), Query Frame = 3
Query:   54 EEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVH 560
            ++V+KIV  LNEGQ                FL +VKS LR  FHVAAQNCWVKKGGAFTGE+SAEMLVNL +PWVILGHSERR +L E NEFVGDKVAYALSQGLKVIACVGETLEQREAGSTM+VVAAQTKAIA+++  WSN+V+AYEPVWAIGTGKVATPAQAQEVH
Sbjct:   18 DQVEKIVKTLNEGQVPPSDVVEVVVSPPYVFLPVVKSQLRQEFHVAAQNCWVKKGGAFTGEVSAEMLVNLGVPWVILGHSERRALLGESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAEKIKDWSNVVVAYEPVWAIGTGKVATPAQAQEVH 186          

HSP 2 Score: 38.891 bits (89), Expect = 4.488e-73
Identity = 23/44 (52.27%), Postives = 25/44 (56.82%), Query Frame = 2
Query:  578 WLLANPSPEIAAATRIFYGGIRKMGATGKELAAPP*C*QQFVGG 709
            WL  N SPE+A +TRI YGG     A  KELAA P      VGG
Sbjct:  192 WLKTNASPEVAESTRIIYGG-SVTAANCKELAAQPDVDGFLVGG 234          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_ARATH (Triosephosphate isomerase, cytosolic OS=Arabidopsis thaliana GN=CTIMC PE=1 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 3.756e-72
Identity = 132/169 (78.11%), Postives = 145/169 (85.80%), Query Frame = 3
Query:   54 EEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVH 560
            EEVKKIV+ LNE Q                FL LVKS+LR  F VAAQNCWVKKGGAFTGE+SAEMLVNL+IPWVILGHSERR ILNE +EFVGDKVAYAL+QGLKVIACVGETLE+REAGSTM+VVAAQTKAIADRV++WSN+V+AYEPVWAIGTGKVA+PAQAQEVH
Sbjct:   18 EEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSTLRSDFFVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRAILNESSEFVGDKVAYALAQGLKVIACVGETLEEREAGSTMDVVAAQTKAIADRVTNWSNVVIAYEPVWAIGTGKVASPAQAQEVH 186          

HSP 2 Score: 31.9574 bits (71), Expect = 3.756e-72
Identity = 13/21 (61.90%), Postives = 15/21 (71.43%), Query Frame = 2
Query:  575 KWLLANPSPEIAAATRIFYGG 637
            KWL  N S ++AA TRI YGG
Sbjct:  191 KWLAKNVSADVAATTRIIYGG 211          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_ORYSJ (Triosephosphate isomerase, cytosolic OS=Oryza sativa subsp. japonica GN=TPI PE=1 SV=3)

HSP 1 Score: 252.292 bits (643), Expect = 3.756e-72
Identity = 125/169 (73.96%), Postives = 139/169 (82.25%), Query Frame = 3
Query:   54 EEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVH 560
            ++V KIV +LNEGQ                FL +VKS LRP   VAAQNCWVKKGGAFTGE+SAEMLVNL IPWVILGHSERR +L E NEFVGDKVAYALSQGLKVIACVGETLEQRE+GSTM+VVAAQTKAI++R+  W+N+V+AYEPVWAIGTGKVATP QAQEVH
Sbjct:   18 DQVDKIVKILNEGQIASTDVVEVVVSPPYVFLPVVKSQLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRSLLGESNEFVGDKVAYALSQGLKVIACVGETLEQRESGSTMDVVAAQTKAISERIKDWTNVVVAYEPVWAIGTGKVATPDQAQEVH 186          

HSP 2 Score: 41.5874 bits (96), Expect = 3.756e-72
Identity = 25/45 (55.56%), Postives = 27/45 (60.00%), Query Frame = 2
Query:  575 KWLLANPSPEIAAATRIFYGGIRKMGATGKELAAPP*C*QQFVGG 709
            KWL AN S E+A +TRI YGG    GA  KELAA P      VGG
Sbjct:  191 KWLAANVSAEVAESTRIIYGG-SVTGANCKELAAKPDVDGFLVGG 234          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_COPJA (Triosephosphate isomerase, cytosolic OS=Coptis japonica PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 1.848e-71
Identity = 130/170 (76.47%), Postives = 142/170 (83.53%), Query Frame = 3
Query:   54 EEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHF 563
            EEVKKIV++LNE +                FL  VK+ LR  FHVAAQNCWVKKGGAFTGE+SAEMLVNL IPWVILGHSERR +LNE NEFVGDK AYALSQGLKVIACVGETLEQREAGST+ VVAAQTKAIA++VS W+NIV+AYEPVWAIGTGKVA+PAQAQEVHF
Sbjct:   18 EEVKKIVTLLNEAEVPSEDVVEVVVSPPYVFLPFVKNLLRADFHVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRALLNESNEFVGDKTAYALSQGLKVIACVGETLEQREAGSTISVVAAQTKAIAEKVSDWTNIVVAYEPVWAIGTGKVASPAQAQEVHF 187          

HSP 2 Score: 33.4982 bits (75), Expect = 1.848e-71
Identity = 19/45 (42.22%), Postives = 23/45 (51.11%), Query Frame = 2
Query:  575 KWLLANPSPEIAAATRIFYGGIRKMGATGKELAAPP*C*QQFVGG 709
            KW+  N   ++A + RI YGG    GA  KELA  P      VGG
Sbjct:  191 KWIKENVGADVAGSVRIIYGG-SVNGANSKELAGQPDIDGFLVGG 234          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_SECCE (Triosephosphate isomerase, cytosolic OS=Secale cereale PE=2 SV=3)

HSP 1 Score: 241.121 bits (614), Expect = 1.082e-68
Identity = 121/168 (72.02%), Postives = 135/168 (80.36%), Query Frame = 3
Query:   57 EVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVH 560
            +V+ IV+ LN GQ                FL  VK  LRP   VAAQNCWVKKGGAFTGE+SAEMLVNL IPWVILGHSERR +L E +EFVG+KVAYAL+QGLKVIACVGETLEQREAGSTMEVVA QTKAIAD++  W+N+V+AYEPVWAIGTGKVA+PAQAQEVH
Sbjct:   19 QVETIVNTLNAGQIASPDVVEVVVSPPYVFLPTVKDKLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRSLLAESSEFVGEKVAYALAQGLKVIACVGETLEQREAGSTMEVVAEQTKAIADKIKDWTNVVVAYEPVWAIGTGKVASPAQAQEVH 186          

HSP 2 Score: 41.2022 bits (95), Expect = 1.082e-68
Identity = 24/44 (54.55%), Postives = 27/44 (61.36%), Query Frame = 2
Query:  578 WLLANPSPEIAAATRIFYGGIRKMGATGKELAAPP*C*QQFVGG 709
            WL  N SPE+A +TRI YGG    GA+ KELAA P      VGG
Sbjct:  192 WLKTNVSPEVAESTRIIYGG-SVTGASCKELAAQPDVDGFLVGG 234          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_LACSA (Triosephosphate isomerase, cytosolic (Fragment) OS=Lactuca sativa PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 2.182e-63
Identity = 112/125 (89.60%), Postives = 120/125 (96.00%), Query Frame = 3
Query:  186 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVH 560
            VAAQNCWVKKGGAFTGE+SAEML NL +PWVILGHSERR +LNE NEFVGDKVAYALSQGLKVIACVGETLEQREAG+TMEVVAAQTKAIAD++SSW N+VLAYEPVWAIGTGKVA+PAQAQEVH
Sbjct:    3 VAAQNCWVKKGGAFTGEVSAEMLANLGVPWVILGHSERRALLNETNEFVGDKVAYALSQGLKVIACVGETLEQREAGTTMEVVAAQTKAIADKISSWDNVVLAYEPVWAIGTGKVASPAQAQEVH 127          

HSP 2 Score: 31.187 bits (69), Expect = 2.182e-63
Identity = 16/32 (50.00%), Postives = 20/32 (62.50%), Query Frame = 2
Query:  575 KWLLANPSPEIAAATRIFYGGIRKMGATGKEL 670
            KW   N S E++A+TRI YGG    G+  KEL
Sbjct:  132 KWFCDNVSAEVSASTRIIYGG-SVSGSNCKEL 162          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_HORVU (Triosephosphate isomerase, cytosolic OS=Hordeum vulgare PE=1 SV=3)

HSP 1 Score: 240.736 bits (613), Expect = 7.935e-63
Identity = 132/221 (59.73%), Postives = 152/221 (68.78%), Query Frame = 3
Query:   54 EEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFAPEENGFLQTPVLKLLQQHGSSTEGSVRWGQLARNWLPPLDVDSSLWVVGG 716
            E+V+ IV  LN GQ                FL +VK+ LRP   VAAQNCWVKKGGAFTGE+SAEML NL +PWVILGHSERR +L E +EFVG+KVAYAL+QGLKVIACVGETLEQREAGSTMEVVA QTKAIA ++  WSN V+AYEPVWAIGTGKVATPAQAQEVH       +L+T V   + +      G    G   +      DVD   ++VGG
Sbjct:   18 EQVEAIVQTLNAGQIVSPDVVEVVVSPPYVFLPIVKAKLRPEIQVAAQNCWVKKGGAFTGEVSAEMLANLGVPWVILGHSERRSLLGESSEFVGEKVAYALAQGLKVIACVGETLEQREAGSTMEVVAEQTKAIAGKIKDWSNGVVAYEPVWAIGTGKVATPAQAQEVH--ANLRDWLKTNVSPEVAESTRIIYGGSVTGASCKELAAQADVDG--FLVGG 234          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_STELP (Triosephosphate isomerase, cytosolic OS=Stellaria longipes GN=TPI PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 2.939e-50
Identity = 101/172 (58.72%), Postives = 114/172 (66.28%), Query Frame = 3
Query:   54 EEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIAD-RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFA 566
            E V KIV  LNE                  FL    + L+    VAAQNCWVKKGGAFTGE+SA+ML NL I WVILGHSERR +L E NEFVG K AYA S+GL VIAC+GE LE+REAG T +V   Q K+ A      W N+V+AYEPVWAIGTGKVA+P QAQEVH A
Sbjct:   18 ESVSKIVDTLNEPTIAANDVVTVVVSPPYVFLPDENAELKHEIQVAAQNCWVKKGGAFTGEVSAQMLANLGITWVILGHSERRTLLGESNEFVGKKAAYAQSEGLGVIACIGELLEEREAGKTFDVCFKQLKSFARFPAKPWDNVVVAYEPVWAIGTGKVASPEQAQEVHVA 189          

HSP 2 Score: 29.6462 bits (65), Expect = 2.939e-50
Identity = 12/20 (60.00%), Postives = 14/20 (70.00%), Query Frame = 2
Query:  578 WLLANPSPEIAAATRIFYGG 637
            WL  N S E+A+ TRI YGG
Sbjct:  193 WLKTNVSEEVASKTRIIYGG 212          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIC_SPIOL (Triosephosphate isomerase, chloroplastic OS=Spinacia oleracea GN=TPIP1 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.442e-49
Identity = 96/171 (56.14%), Postives = 116/171 (67.84%), Query Frame = 3
Query:   54 EEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFA 566
            E + K+VS LN                   ++  VKSSL     ++AQNCW+ KGGAFTGEIS E L +L   WVILGHSERR ++ E NEF+G K AYAL+QG+ VIAC+GE LE+REAG T +V   Q KA AD + SW N+V+AYEPVWAIGTGKVA+P QAQEVH A
Sbjct:   86 ESITKLVSDLNSATLEADVDVVVAPPFV--YIDQVKSSLTGRVEISAQNCWIGKGGAFTGEISVEQLKDLGCQWVILGHSERRHVIGEQNEFIGKKAAYALNQGVGVIACIGELLEEREAGKTFDVCYQQLKAFADALPSWDNVVVAYEPVWAIGTGKVASPDQAQEVHVA 254          

HSP 2 Score: 29.261 bits (64), Expect = 2.442e-49
Identity = 12/20 (60.00%), Postives = 14/20 (70.00%), Query Frame = 2
Query:  578 WLLANPSPEIAAATRIFYGG 637
            WL  N S E+A+ TRI YGG
Sbjct:  258 WLKKNVSEEVASKTRIIYGG 277          
The following BLAST results are available for this feature:
BLAST of EY667929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_PETHY4.111e-7475.74Triosephosphate isomerase, cytosolic OS=Petunia hy... [more]
TPIS_MAIZE4.488e-7375.74Triosephosphate isomerase, cytosolic OS=Zea mays P... [more]
TPIS_ARATH3.756e-7278.11Triosephosphate isomerase, cytosolic OS=Arabidopsi... [more]
TPIS_ORYSJ3.756e-7273.96Triosephosphate isomerase, cytosolic OS=Oryza sati... [more]
TPIS_COPJA1.848e-7176.47Triosephosphate isomerase, cytosolic OS=Coptis jap... [more]
TPIS_SECCE1.082e-6872.02Triosephosphate isomerase, cytosolic OS=Secale cer... [more]
TPIS_LACSA2.182e-6389.60Triosephosphate isomerase, cytosolic (Fragment) OS... [more]
TPIS_HORVU7.935e-6359.73Triosephosphate isomerase, cytosolic OS=Hordeum vu... [more]
TPIS_STELP2.939e-5058.72Triosephosphate isomerase, cytosolic OS=Stellaria ... [more]
TPIC_SPIOL2.442e-4956.14Triosephosphate isomerase, chloroplastic OS=Spinac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-044-C05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY667929 ID=EY667929; Name=EY667929; organism=Citrus sinensis; type=EST; length=869bp
CGGAATTCCCTTCCCGACCCACGCGTCCGCCCACGCGTCTGACTGGAACA
ACTGAAGAAGTGAAAAAGATAGTGAGCGTACTCAATGAAGGTCAAGTTCC
ATCTTCTGATGTCGTTGAGGTCGTTGTTAGCCCTCCGTTTGTGTTTCTTG
GACTGGTGAAGAGTTCGTTGAGGCCTGGCTTTCATGTTGCGGCACAGAAT
TGCTGGGTCAAGAAGGGAGGTGCTTTCACCGGTGAGATTAGTGCGGAAAT
GCTCGTCAATTTGGAAATTCCTTGGGTCATTCTTGGTCATTCTGAAAGGA
GACTCATTTTGAATGAATTAAATGAGTTTGTTGGGGATAAGGTTGCATAT
GCACTTTCTCAAGGTTTGAAGGTGATTGCTTGTGTTGGTGAGACACTTGA
GCAGCGTGAAGCAGGATCTACTATGGAAGTTGTTGCTGCACAAACTAAAG
CAATCGCAGATCGAGTCTCAAGCTGGTCAAACATTGTTTTGGCCTATGAA
CCTGTGTGGGCTATTGGAACTGGGAAGGTTGCCACTCCAGCGCAGGCTCA
AGAAGTACATTTTGCACCTGAGGAAAATGGCTTCTTGCAAACCCCAGTCC
TGAAATTGCTGCAGCAACACGGATCTTCTACGGAGGGATCCGTAAGATGG
GGGCAACTGGCAAGGAATTGGCTGCCCCCCCTTGATGTTGACAGCAGTTT
GTGGGTGGTGGGTGGTTTTGTTGAAAGCTGGACATGACTTGCCACACCCC
AGATCGGCGAGGCCTGGAAAAGAAGCGCCCGCAACCTGTTCGAAAGGAAG
GTAGGCAGAAAAAACAAAAAGAACGAAAGGGGCAGAAAGAAGAACCGATA
GCTGATGCCATAAAGGCTC
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