EY667880

Overview
NameEY667880
Unique NameEY667880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length498
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY667880 vs. ExPASy Swiss-Prot
Match: GOX2_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 OS=Arabidopsis thaliana GN=At3g14420 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.760e-46
Identity = 90/107 (84.11%), Postives = 96/107 (89.72%), Query Frame = 3
Query:  168 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSW 488
            EITNV EY+AIAK+KLPKMV+DYYASGAEDQWTLQENRNAF+RILFRPRILIDVSKIDM TTVLGFKISMPIM+APTAMQKMAHP+GEY         GTIMTLSSW
Sbjct:    2 EITNVTEYDAIAKQKLPKMVYDYYASGAEDQWTLQENRNAFARILFRPRILIDVSKIDMTTTVLGFKISMPIMVAPTAMQKMAHPDGEYATARAASAAGTIMTLSSW 108          
BLAST of EY667880 vs. ExPASy Swiss-Prot
Match: GOX_SPIOL (Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 8.736e-46
Identity = 90/107 (84.11%), Postives = 94/107 (87.85%), Query Frame = 3
Query:  168 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSW 488
            EITNV EYEAIAK+KLPKMV+DYYASGAEDQWTL ENRNAFSRILFRPRILIDV+ IDM TT+LGFKISMPIMIAPTAMQKMAHPEGEY         GTIMTLSSW
Sbjct:    2 EITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSW 108          
BLAST of EY667880 vs. ExPASy Swiss-Prot
Match: GOX1_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 OS=Arabidopsis thaliana GN=At3g14415 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 5.663e-45
Identity = 88/107 (82.24%), Postives = 94/107 (87.85%), Query Frame = 3
Query:  168 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSW 488
            EITNV EY+AIAK KLPKMV+DYYASGAEDQWTLQENRNAF+RILFRPRILIDV+KIDM TTVLGFKISMPIM+APTA QKMAHP+GEY         GTIMTLSSW
Sbjct:    2 EITNVTEYDAIAKAKLPKMVYDYYASGAEDQWTLQENRNAFARILFRPRILIDVNKIDMATTVLGFKISMPIMVAPTAFQKMAHPDGEYATARAASAAGTIMTLSSW 108          
BLAST of EY667880 vs. ExPASy Swiss-Prot
Match: HAOX_DICDI (Hydroxyacid oxidase OS=Dictyostelium discoideum GN=haox PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.735e-23
Identity = 58/118 (49.15%), Postives = 71/118 (60.17%), Query Frame = 3
Query:  132 NLSRKQSTDKMGEITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSS 485
            N    + T+++    +V E    AK  LPKM +DYYASG+ DQ TL EN NAFSRI   PR L+DVSK++  T + G  IS PI+IAP AMQ+MA   GE           TIMTLSS
Sbjct:   18 NQFSNKKTNRLDSFVSVSELHEEAKRLLPKMAYDYYASGSNDQITLAENENAFSRIKLVPRSLVDVSKVNTKTRIFGRDISTPILIAPWAMQRMASQRGELDTVEASKEFNTIMTLSS 135          
BLAST of EY667880 vs. ExPASy Swiss-Prot
Match: HAOX1_HUMAN (Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.270e-20
Identity = 50/103 (48.54%), Postives = 68/103 (66.02%), Query Frame = 3
Query:  180 VMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSW 488
            + +YE  AK  LPK ++DYY SGA D+ TL +N  AFSR    PR+L +V++ D++T+VLG ++SMPI +  TAMQ+MAH +GE          GT M LSSW
Sbjct:    8 INDYEQHAKSVLPKSIYDYYRSGANDEETLADNIAAFSRWKLYPRMLRNVAETDLSTSVLGQRVSMPICVGATAMQRMAHVDGELATVRACQSLGTGMMLSSW 110          
BLAST of EY667880 vs. ExPASy Swiss-Prot
Match: HAOX1_MOUSE (Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.834e-19
Identity = 50/103 (48.54%), Postives = 65/103 (63.11%), Query Frame = 3
Query:  180 VMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSW 488
            + +YE   +  L K V+DYY SGA DQ TL +N  AFSR    PR+L +V+ ID++T+VLG ++SMPI +  TAMQ MAH +GE          GT M LSSW
Sbjct:    8 ISDYEQHVRSVLQKSVYDYYRSGANDQETLADNIQAFSRWKLYPRMLRNVADIDLSTSVLGQRVSMPICVGATAMQCMAHVDGELATVRACQTMGTGMMLSSW 110          
BLAST of EY667880 vs. ExPASy Swiss-Prot
Match: CYB2_HANAN (Cytochrome b2, mitochondrial OS=Hansenula anomala GN=CYB2 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.553e-18
Identity = 43/99 (43.43%), Postives = 63/99 (63.64%), Query Frame = 3
Query:  135 LSRKQSTDKMGEITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGE 431
            L R +    + ++ N+ ++E IA++ LP     YY S A+D+ TL+EN NA+ RI F P+ILIDV  +D++T   G K S P  I+ TA+ K+ HPEGE
Sbjct:  175 LERIERKPPLSQMINLHDFETIARQILPPPALAYYCSAADDEVTLRENHNAYHRIFFNPKILIDVKDVDISTEFFGEKTSAPFYISATALAKLGHPEGE 273          
BLAST of EY667880 vs. ExPASy Swiss-Prot
Match: CYB2_YEAST (Cytochrome b2, mitochondrial OS=Saccharomyces cerevisiae GN=CYB2 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.229e-16
Identity = 38/91 (41.76%), Postives = 63/91 (69.23%), Query Frame = 3
Query:  162 MGEITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHP-EGE 431
            +  I N+ ++E +A + L K  + YY+SGA D+ T +EN NA+ RI F+P+IL+DV K+D++T +LG  + +P  ++ TA+ K+ +P EGE
Sbjct:  199 LDNIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVSATALCKLGNPLEGE 289          
BLAST of EY667880 vs. ExPASy Swiss-Prot
Match: MDLB_PSEPU ((S)-mandelate dehydrogenase OS=Pseudomonas putida GN=mdlB PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.360e-14
Identity = 37/103 (35.92%), Postives = 61/103 (59.22%), Query Frame = 3
Query:  177 NVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSS 485
            NV +Y  + +++LPKMV+DY   GAED++ ++ NR+ F +  F+P+ L+DVS+  +   VLG + SMP++I PT +     P+G+          G    LS+
Sbjct:    7 NVEDYRKLRQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLST 109          
BLAST of EY667880 vs. ExPASy Swiss-Prot
Match: HAOX2_BOVIN (Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.360e-14
Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 3
Query:  186 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGE 431
            ++   A+E L K  +D+   GA+D  T  EN  AF +I  RPR L DVSK+DM TT+ G +IS PI IAPT   ++A P+GE
Sbjct:    8 DFREHAREHLSKSTWDFIEGGADDCCTRDENMAAFKKIRLRPRYLKDVSKVDMRTTIQGAEISAPICIAPTGFHRLAWPDGE 89          
The following BLAST results are available for this feature:
BLAST of EY667880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
GOX2_ARATH1.760e-4684.11Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 ... [more]
GOX_SPIOL8.736e-4684.11Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia... [more]
GOX1_ARATH5.663e-4582.24Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 ... [more]
HAOX_DICDI2.735e-2349.15Hydroxyacid oxidase OS=Dictyostelium discoideum GN... [more]
HAOX1_HUMAN1.270e-2048.54Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1... [more]
HAOX1_MOUSE1.834e-1948.54Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2... [more]
CYB2_HANAN1.553e-1843.43Cytochrome b2, mitochondrial OS=Hansenula anomala ... [more]
CYB2_YEAST4.229e-1641.76Cytochrome b2, mitochondrial OS=Saccharomyces cere... [more]
MDLB_PSEPU1.360e-1435.92(S)-mandelate dehydrogenase OS=Pseudomonas putida ... [more]
HAOX2_BOVIN1.360e-1447.56Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-036-F02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY667880 ID=EY667880; Name=EY667880; organism=Citrus sinensis; type=EST; length=498bp
CCACGCGTCCGTTCTCTTTGCTTTCTATTTCTTAAATCTCCCTCTATAAC
TCAGTCTTTGTTCATCATCGTCTTCTCTCTACTGGTTTCTCTGAATGCAC
TTTGCTGCACTGTCTTTGTAAACCTTAGATTAATTTAAGTAGAAAACAGT
CAACTGACAAGATGGGAGAGATCACAAATGTGATGGAGTATGAGGCCATT
GCCAAGGAAAAGTTGCCAAAGATGGTGTTTGATTACTATGCTTCAGGTGC
AGAGGACCAGTGGACTTTGCAAGAGAACAGGAATGCTTTCTCAAGAATCC
TGTTTCGACCTCGCATTCTGATTGATGTAAGCAAAATAGACATGAATACC
ACTGTCTTGGGCTTCAAGATATCGATGCCAATCATGATTGCCCCAACAGC
CATGCAGAAGATGGCTCATCCTGAAGGGGAGTATGCTACAGCTAGAGCTG
CATCGGCTGCTGGAACGATTATGACATTGTCTTCGTGGGGCCACTTTT
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