FC922018
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC922018 vs. ExPASy Swiss-Prot
Match: ISPG_PARUW (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Protochlamydia amoebophila (strain UWE25) GN=ispG PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.799e-26 Identity = 56/69 (81.16%), Postives = 62/69 (89.86%), Query Frame = -1 Query: 1 RAVRIGTNHGSLSDRIMSYYGDSPRGMVESAVEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 207 RA+RIGTNHGSLSDRIM+ YGD+P GMVESA+EFARICRK D+HNFLFSMKASNP VM+QAYRLL M Sbjct: 162 RAMRIGTNHGSLSDRIMNRYGDTPFGMVESALEFARICRKNDYHNFLFSMKASNPQVMIQAYRLLTQAM 230
BLAST of FC922018 vs. ExPASy Swiss-Prot
Match: ISPG_AKKM8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=ispG PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.491e-22 Identity = 49/70 (70.00%), Postives = 60/70 (85.71%), Query Frame = -1 Query: 1 GRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAVEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 210 GRA+RIG+NHGSLSDRI++ +GD+P GMVESA+EFA+I R LD+H+ +FSMKASN VMV AYRLLV M Sbjct: 159 GRAMRIGSNHGSLSDRILNRFGDTPEGMVESAIEFAQIARDLDYHSLVFSMKASNVKVMVAAYRLLVERM 228
BLAST of FC922018 vs. ExPASy Swiss-Prot
Match: ISPG_LEPBL (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=ispG PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.712e-20 Identity = 45/68 (66.18%), Postives = 58/68 (85.29%), Query Frame = -1 Query: 7 GRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAVEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVA 210 G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA+EF RI L++++ + SMKASNP VMVQAYR+L + Sbjct: 159 GVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALEFIRIAESLNYYDIVVSMKASNPQVMVQAYRMLAS 226
BLAST of FC922018 vs. ExPASy Swiss-Prot
Match: ISPG_LEPBJ (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=ispG PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.712e-20 Identity = 45/68 (66.18%), Postives = 58/68 (85.29%), Query Frame = -1 Query: 7 GRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAVEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVA 210 G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA+EF RI L++++ + SMKASNP VMVQAYR+L + Sbjct: 159 GVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALEFIRIAESLNYYDIVVSMKASNPQVMVQAYRMLAS 226
BLAST of FC922018 vs. ExPASy Swiss-Prot
Match: ISPG_LEPIN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira interrogans GN=ispG PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.766e-20 Identity = 45/68 (66.18%), Postives = 57/68 (83.82%), Query Frame = -1 Query: 7 GRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAVEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVA 210 G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA+EF RI L +++ + SMKASNP VMVQAYR+L + Sbjct: 159 GVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLAS 226
BLAST of FC922018 vs. ExPASy Swiss-Prot
Match: ISPG_LEPIC (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ispG PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.766e-20 Identity = 45/68 (66.18%), Postives = 57/68 (83.82%), Query Frame = -1 Query: 7 GRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAVEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVA 210 G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA+EF RI L +++ + SMKASNP VMVQAYR+L + Sbjct: 159 GVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLAS 226
BLAST of FC922018 vs. ExPASy Swiss-Prot
Match: ISPG_SYNP2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ispG PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.953e-19 Identity = 43/70 (61.43%), Postives = 55/70 (78.57%), Query Frame = -1 Query: 1 GRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAVEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 210 G+A+RIG NHGSL++R++ YGD+P GMVESA+EF RIC+ LDFHN + SMKAS VM+ AYRL+ M Sbjct: 168 GKAMRIGVNHGSLAERMLFTYGDTPEGMVESALEFIRICQSLDFHNLIISMKASRVPVMLAAYRLMAKRM 237
BLAST of FC922018 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTE (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlorobium tepidum GN=ispG PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.953e-19 Identity = 46/68 (67.65%), Postives = 58/68 (85.29%), Query Frame = -1 Query: 7 GRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAVEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVA 210 G ++RIGTNHGSLSDRI+S YG+SP GMVE+A+EF+RIC +++ LFSMK+SN VM+QAYRLLVA Sbjct: 220 GVSMRIGTNHGSLSDRIVSRYGNSPEGMVEAALEFSRICEDEGYYDQLFSMKSSNVRVMIQAYRLLVA 287
BLAST of FC922018 vs. ExPASy Swiss-Prot
Match: ISPG_PROMA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Prochlorococcus marinus GN=ispG PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.351e-19 Identity = 43/69 (62.32%), Postives = 54/69 (78.26%), Query Frame = -1 Query: 1 RAVRIGTNHGSLSDRIMSYYGDSPRGMVESAVEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 207 +A+RIG NHGSL++R++ YGD+P GMVESA+EF RIC LDFHN + SMKAS P VM+ AYRL+ M Sbjct: 172 KALRIGVNHGSLAERMLFQYGDTPLGMVESAMEFVRICDSLDFHNIVISMKASRPPVMLAAYRLMADAM 240
BLAST of FC922018 vs. ExPASy Swiss-Prot
Match: ISPG_CHLMU (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia muridarum GN=ispG PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.351e-19 Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = -1 Query: 1 GRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAVEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 210 GRA+RIG NHGSLS+RIM YGD+ GMV SA+E+A +C +D+HN +FSMK+SNP MV AYR L E+ Sbjct: 157 GRAMRIGVNHGSLSERIMQRYGDTIEGMVFSALEYAEVCVNMDYHNIVFSMKSSNPRTMVAAYRALAREL 226 The following BLAST results are available for this feature:
BLAST of FC922018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >FC922018 ID=FC922018; Name=FC922018; organism=Citrus sinensis; type=EST; length=210bpback to top |