FC921999

Overview
NameFC921999
Unique NameFC921999
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length272
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13846 contig Csv1_Contig13846:266..537. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921999 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 167.162 bits (422), Expect = 2.393e-41
Identity = 80/90 (88.89%), Postives = 86/90 (95.56%), Query Frame = 1
Query:    1 QEAEKYKAEDDEHRKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAK 270
            QEAEKYK+ED+EH+KKVEAKN LENYAYNMRNTI+DEKI  KLPAADKKKIED+IEQAIQWL+GNQLAEADEFEDKMKELE ICNPIIAK
Sbjct:  526 QEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIQDEKIGEKLPAADKKKIEDSIEQAIQWLEGNQLAEADEFEDKMKELESICNPIIAK 615          
BLAST of FC921999 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 6.961e-41
Identity = 77/90 (85.56%), Postives = 85/90 (94.44%), Query Frame = 1
Query:    1 QEAEKYKAEDDEHRKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAK 270
            QEAEKYK+ED+EH+KKVEAKN LENYAYNMRNTI+DEKI  KLPAADKKK+ED+IE+AIQWLDGNQL EADEFEDKMKELE +CNPIIAK
Sbjct:  526 QEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIRDEKIGEKLPAADKKKVEDSIEEAIQWLDGNQLGEADEFEDKMKELESVCNPIIAK 615          
BLAST of FC921999 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.313e-39
Identity = 77/90 (85.56%), Postives = 85/90 (94.44%), Query Frame = 1
Query:    1 QEAEKYKAEDDEHRKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAK 270
            QEAEKYK+ED+EH+KKVEAKN LENYAYNMRNTIKDEKI++KL A D+ KIEDAIEQAIQWLDGNQLAEA+EFEDKMKELE +CNPIIAK
Sbjct:  526 QEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDEKIASKLSADDRTKIEDAIEQAIQWLDGNQLAEAEEFEDKMKELESLCNPIIAK 615          
BLAST of FC921999 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 157.147 bits (396), Expect = 2.476e-38
Identity = 74/90 (82.22%), Postives = 83/90 (92.22%), Query Frame = 1
Query:    1 QEAEKYKAEDDEHRKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAK 270
            QEAEKYK+ED+EH+KKVE+KN LENYAYNMRN +KDEKI AKL  ADKKKIE+AI+ +IQWLDGNQLAEADEF+DKMKELE ICNPIIAK
Sbjct:  526 QEAEKYKSEDEEHKKKVESKNALENYAYNMRNIVKDEKIGAKLSEADKKKIEEAIDASIQWLDGNQLAEADEFDDKMKELESICNPIIAK 615          
BLAST of FC921999 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 5.516e-38
Identity = 74/90 (82.22%), Postives = 83/90 (92.22%), Query Frame = 1
Query:    1 QEAEKYKAEDDEHRKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAK 270
            QEAEKYKAED+E +KKV+AKN LENYAYNMRNTIKD+KI++KLPA DKKKIEDA++ AI WLD NQLAE +EFEDKMKELEGICNPIIAK
Sbjct:  522 QEAEKYKAEDEEVKKKVDAKNALENYAYNMRNTIKDDKIASKLPAEDKKKIEDAVDGAISWLDSNQLAEVEEFEDKMKELEGICNPIIAK 611          
BLAST of FC921999 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 7.204e-38
Identity = 74/90 (82.22%), Postives = 82/90 (91.11%), Query Frame = 1
Query:    1 QEAEKYKAEDDEHRKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAK 270
            QEAEKYKAED+E +KKVEAKN LENYAYNMRNT+KDEKI +KL + DKKKIEDA++QAI WL+ NQLAE DEFEDKMKELEGICNPIIAK
Sbjct:  528 QEAEKYKAEDEELKKKVEAKNSLENYAYNMRNTVKDEKIGSKLSSDDKKKIEDAVDQAISWLESNQLAEVDEFEDKMKELEGICNPIIAK 617          
BLAST of FC921999 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 9.408e-38
Identity = 74/90 (82.22%), Postives = 85/90 (94.44%), Query Frame = 1
Query:    1 QEAEKYKAEDDEHRKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAK 270
            QEAEKYK+ED+E +KKVEAKN LENYAYNMRNTIKD+KI+++L AADKK+IEDAI++AI+WLD NQLAEADEFEDKMKELE ICNPIIAK
Sbjct:  526 QEAEKYKSEDEELKKKVEAKNALENYAYNMRNTIKDDKINSQLSAADKKRIEDAIDEAIKWLDNNQLAEADEFEDKMKELESICNPIIAK 615          
BLAST of FC921999 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 7.965e-37
Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = 1
Query:    1 QEAEKYKAEDDEHRKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAK 270
            QEAEKYK+ED+EH+KKV+AKN LENYAYNMRNTI+DEKI  KL   DKKKIED+IE AI+WL+ NQLAE DEFEDKMKELE ICNPIIAK
Sbjct:  526 QEAEKYKSEDEEHKKKVDAKNALENYAYNMRNTIRDEKIGEKLAGDDKKKIEDSIEAAIEWLEANQLAECDEFEDKMKELESICNPIIAK 615          
BLAST of FC921999 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 5.708e-35
Identity = 69/90 (76.67%), Postives = 79/90 (87.78%), Query Frame = 1
Query:    1 QEAEKYKAEDDEHRKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAK 270
            ++AE+YKAED+E +KKVEAKN LENYAYNMRNTIKDEKI  KL   +K+KIE A+E AIQWL+GNQ+AE DEFEDK KELEGICNPIIAK
Sbjct:  525 KDAERYKAEDEEVKKKVEAKNSLENYAYNMRNTIKDEKIGGKLSPDEKQKIEKAVEDAIQWLEGNQMAEVDEFEDKQKELEGICNPIIAK 614          
BLAST of FC921999 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 4.832e-34
Identity = 67/90 (74.44%), Postives = 79/90 (87.78%), Query Frame = 1
Query:    1 QEAEKYKAEDDEHRKKVEAKNGLENYAYNMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIAK 270
            +EAEKYKAED+E +KKVEAKN LENYAYNMRNTIKD+KI  KL A DK+KIE A+ +AI+WL+ NQLAE DE EDK+KELEG+CNPIIA+
Sbjct:  528 KEAEKYKAEDEEVKKKVEAKNALENYAYNMRNTIKDDKIPGKLDAGDKEKIETAVNEAIEWLEKNQLAEVDELEDKLKELEGLCNPIIAR 617          
The following BLAST results are available for this feature:
BLAST of FC921999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
HSP71_ARATH2.393e-4188.89Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP72_ARATH6.961e-4185.56Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP72_SOLLC1.313e-3985.56Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP7E_SPIOL2.476e-3882.22Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP70_MAIZE5.516e-3882.22Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP71_SOLLC7.204e-3882.22Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP7C_PETHY9.408e-3882.22Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP73_ARATH7.965e-3780.00Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP70_SOYBN5.708e-3576.67Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP70_DAUCA4.832e-3474.44Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]

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Properties
Property NameValue
Genbank descriptionC06056D07T7 RindPdigS Citrus sinensis cDNA clone C06056D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921999 ID=FC921999; Name=FC921999; organism=Citrus sinensis; type=EST; length=272bp
CAAGAGGCAGAAAAATACAAGGCCGAGGATGACGAGCACAGGAAAAAGGT
GGAGGCGAAGAATGGTCTTGAGAATTATGCTTACAACATGAGAAACACAA
TCAAGGATGAAAAGATCAGCGCAAAGCTTCCTGCTGCTGACAAGAAGAAA
ATTGAAGATGCCATTGAGCAGGCCATCCAATGGCTTGACGGGAACCAGCT
CGCAGAGGCAGATGAGTTTGAAGATAAGATGAAAGAGCTGGAGGGCATCT
GCAACCCAATTATTGCCAAGAT
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