EG358222

Overview
NameEG358222
Unique NameEG358222
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length400
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:530..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358222 vs. ExPASy Swiss-Prot
Match: TRPD_ARATH (Anthranilate phosphoribosyltransferase, chloroplastic OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 4.752e-42
Identity = 87/121 (71.90%), Postives = 97/121 (80.17%), Query Frame = 3
Query:   36 ANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVPARAAA 398
            ANTVNISTG+SILAAACGAKVAKQ            DVLEALGVV+DL PEG++RCV+E GIGFMMS  YHPAMK V PVRKKLK+KTVFNILGPMLNPA V +AVVGVY+++LV   A A
Sbjct:  190 ANTVNISTGSSILAAACGAKVAKQGNRSSSSACGSADVLEALGVVLDLGPEGIKRCVEEGGIGFMMSPMYHPAMKIVGPVRKKLKIKTVFNILGPMLNPARVSYAVVGVYHKDLVVKMAKA 310          
BLAST of EG358222 vs. ExPASy Swiss-Prot
Match: TRPD_CHLCV (Anthranilate phosphoribosyltransferase OS=Chlamydophila caviae GN=trpD PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 2.991e-28
Identity = 60/115 (52.17%), Postives = 80/115 (69.57%), Query Frame = 3
Query:   36 ANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLV 380
            ANTVNISTG++ILAAACG  +AK             DVLEALG+ I++ PE +  CV E GIGFM +  YHP++K + P+RK +K  +VFNILGP+LNPA   +A++GV NE ++
Sbjct:   84 ANTVNISTGSAILAAACGIPIAKHGNRSVSSQSGSADVLEALGIEIEMSPEELLSCVQEVGIGFMFAPIYHPSLKKLAPIRKGMKFPSVFNILGPLLNPANTEYALIGVSNEPIL 198          
BLAST of EG358222 vs. ExPASy Swiss-Prot
Match: TRPD_VEREI (Anthranilate phosphoribosyltransferase OS=Verminephrobacter eiseniae (strain EF01-2) GN=trpD PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 2.532e-27
Identity = 62/121 (51.24%), Postives = 80/121 (66.12%), Query Frame = 3
Query:   36 ANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVPARAAA 398
            A+T NIST A  +AAA GAKV+K             DV+EALG+ I L PE + RC+ E GIGFM +  +HPAMK V PVRK+L V+T+FNILGP+ NPA  P  +VGV++ +LV  +  A
Sbjct:   90 ASTFNISTCAMFVAAAAGAKVSKHGGRSVSSKSGSADVMEALGIHIHLAPEAIARCIAEVGIGFMFAPNHHPAMKNVAPVRKELGVRTIFNILGPLTNPAEAPHVLVGVFHPDLVGIQVRA 210          
BLAST of EG358222 vs. ExPASy Swiss-Prot
Match: TRPD_CHLFF (Anthranilate phosphoribosyltransferase OS=Chlamydophila felis (strain Fe/C-56) GN=trpD PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.532e-27
Identity = 56/115 (48.70%), Postives = 80/115 (69.57%), Query Frame = 3
Query:   36 ANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLV 380
            ANTVNISTG++IL+AACG  +AK             DVLEALG+ I++ PE +  C+ E GIGFM +  YHP++K + P+RK +K+ + FNILGP+LNPA   ++++GV NE ++
Sbjct:   84 ANTVNISTGSAILSAACGIPIAKHGNRSVSSQSGSADVLEALGIEIEMTPEELLSCIQEVGIGFMFAPIYHPSLKKLAPIRKGMKIPSTFNILGPLLNPANTEYSLIGVSNEPIL 198          
BLAST of EG358222 vs. ExPASy Swiss-Prot
Match: TRPD_ACIAC (Anthranilate phosphoribosyltransferase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.532e-27
Identity = 62/121 (51.24%), Postives = 80/121 (66.12%), Query Frame = 3
Query:   36 ANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVPARAAA 398
            ANT NIST A  +AAA GAK AK             DV+E+LGV IDL PE + RC+ + GIGFM +  +HPAMK V PVRK+L V+T+FNILGP+ NPA  P  ++GV++ +LV  +  A
Sbjct:   90 ANTFNISTCAMFVAAAAGAKTAKHGGRGVSSKSGSADVMESLGVHIDLPPEAIARCIADTGIGFMFAPNHHPAMKNVAPVRKELGVRTLFNILGPLTNPAGAPNILMGVFHPDLVGIQVRA 210          
BLAST of EG358222 vs. ExPASy Swiss-Prot
Match: TRPD_HERA2 (Anthranilate phosphoribosyltransferase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.640e-27
Identity = 59/121 (48.76%), Postives = 79/121 (65.29%), Query Frame = 3
Query:   36 ANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVPARAAA 398
            +NT NIST A+ +AA  GA VAK             DVLE LGV I+LD EGV RC+ +AGIGFM + K+HPAM++  PVR+++ ++T+FN+LGP+ NPA   + V+GV N  L    A A
Sbjct:   86 SNTFNISTTAAFVAAGAGATVAKHGNRAMSSKCGSADVLEGLGVNIELDAEGVARCLRQAGIGFMFAPKFHPAMRYAGPVRREIGIRTIFNVLGPLTNPARAEYQVIGVANAGLAEKLANA 206          
BLAST of EG358222 vs. ExPASy Swiss-Prot
Match: TRPD_POLSJ (Anthranilate phosphoribosyltransferase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=trpD PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.256e-26
Identity = 56/115 (48.70%), Postives = 81/115 (70.43%), Query Frame = 3
Query:   36 ANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLV 380
            ++T NIST +  +AAA GAKV+K             DV+EALG+ I+L PE + +C++EAG+GFM +  +HPAMK V P+RK+L V+T+FNILGP+ NPA  P  ++GV++ +LV
Sbjct:   94 SHTFNISTCSMFVAAAAGAKVSKHGGRSVSSKSGSADVMEALGININLMPEAIAKCIEEAGVGFMFAPNHHPAMKNVAPIRKELGVRTIFNILGPLTNPASAPNILMGVFHPDLV 208          
BLAST of EG358222 vs. ExPASy Swiss-Prot
Match: TRPD_METKA (Anthranilate phosphoribosyltransferase OS=Methanopyrus kandleri GN=trpD PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.256e-26
Identity = 62/122 (50.82%), Postives = 80/122 (65.57%), Query Frame = 3
Query:   39 NTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPA--CVPFAVVGVYNENLVPARAAA 398
            +T N ST A + AAA G  VAK             D+LEALGV I+ DP+ V+RC++E G GFM + K+HPAMK V PVR+KL ++TVFN+LGP+ NPA   V   V+GVY+ENL+   A A
Sbjct:   85 DTFNASTLAGLTAAAAGVPVAKHGNRSVTSECGSADILEALGVNIEADPDTVKRCIEEVGFGFMFAPKFHPAMKNVMPVRRKLGIRTVFNVLGPLTNPARERVTGQVIGVYSENLLDLVAGA 206          
BLAST of EG358222 vs. ExPASy Swiss-Prot
Match: TRPD_METMA (Anthranilate phosphoribosyltransferase OS=Methanosarcina mazei GN=trpD PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.641e-26
Identity = 60/113 (53.10%), Postives = 77/113 (68.14%), Query Frame = 3
Query:   39 NTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENL 377
            NT+N+ST A+I+ AA G  VAK             DVLEALG+ +DL PE VR+ +++ GIGFM +  +HPAMK V  VRKKL V+TVFNILGP+ NPA     VVGV+++NL
Sbjct:   89 NTINVSTAAAIVTAAAGVPVAKHGNRAATSMTGSSDVLEALGIKVDLSPEYVRKTIEKIGIGFMFAPVFHPAMKRVAGVRKKLGVRTVFNILGPLTNPAGAKGQVVGVFDKNL 201          
BLAST of EG358222 vs. ExPASy Swiss-Prot
Match: TRPD_DIAST (Anthranilate phosphoribosyltransferase OS=Diaphorobacter sp. (strain TPSY) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.656e-26
Identity = 59/121 (48.76%), Postives = 80/121 (66.12%), Query Frame = 3
Query:   36 ANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVPARAAA 398
            ANT NIST A+ + AA GAKV+K             D +EALGV I+L P  + +C+ + GIGFM +  +HPAMK V PVRK+L V+T+FNILGP+ NPA  P  ++GV++E+LV  +  A
Sbjct:   91 ANTFNISTCATFVIAAAGAKVSKHGGRSVSSKSGSADAMEALGVHINLQPAQIAQCIGDVGIGFMFAPNHHPAMKNVAPVRKELGVRTIFNILGPLTNPAGAPNILMGVFHEDLVGIQVRA 211          
The following BLAST results are available for this feature:
BLAST of EG358222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_ARATH4.752e-4271.90Anthranilate phosphoribosyltransferase, chloroplas... [more]
TRPD_CHLCV2.991e-2852.17Anthranilate phosphoribosyltransferase OS=Chlamydo... [more]
TRPD_VEREI2.532e-2751.24Anthranilate phosphoribosyltransferase OS=Verminep... [more]
TRPD_CHLFF2.532e-2748.70Anthranilate phosphoribosyltransferase OS=Chlamydo... [more]
TRPD_ACIAC2.532e-2751.24Anthranilate phosphoribosyltransferase OS=Acidovor... [more]
TRPD_HERA25.640e-2748.76Anthranilate phosphoribosyltransferase OS=Herpetos... [more]
TRPD_POLSJ1.256e-2648.70Anthranilate phosphoribosyltransferase OS=Polaromo... [more]
TRPD_METKA1.256e-2650.82Anthranilate phosphoribosyltransferase OS=Methanop... [more]
TRPD_METMA1.641e-2653.10Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_DIAST3.656e-2648.76Anthranilate phosphoribosyltransferase OS=Diaphoro... [more]

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Properties
Property NameValue
Genbank description4b10 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl004b10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358222 ID=EG358222; Name=EG358222; organism=Citrus sinensis; type=EST; length=400bp
AGCGTGGTCGCGGCCGAGGTACAGGAGGTGATGGTGCAAACACAGTGAAC
ATTTCAACTGGTGCTTCAATTCTTGCTGCAGCTTGTGGTGCAAAAGTTGC
CAAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGT
TAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGG
TGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCGACAAAGTATCACCC
TGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTG
TATTCAATATATTGGGTCCTATGTTGAATCCTGCATGTGTGCCATTCGCT
GTGGTTGGTGTTTACAATGAAAACTTGGTACCTGCCCGGGCGGCCGCTCG
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