EY735908

Overview
NameEY735908
Unique NameEY735908
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY735908 vs. ExPASy Swiss-Prot
Match: TBCEL_HUMAN (Tubulin-specific chaperone cofactor E-like protein OS=Homo sapiens GN=TBCEL PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 8.027e-13
Identity = 58/187 (31.02%), Postives = 95/187 (50.80%), Query Frame = 2 
Query:   47 LQLLNLEDNCIAEWSEILKL-CQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEESYLPFQNLCCLLLGSNMIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGKIKILNGSEVSPRERKESEIRYVRLVMSELHDN-PGKIRRLRPRFGER*ECLGIEDERRSADLVEI 601
            L+LL++ DN + +W+EI KL     SL+ L L  N+LN I  P+ D++  L             F NL  + L  + ++    ID L+SFPKL ++RL   P+  P      R  +IARL  +  LNGS V+  ER++SE  ++R  +    +  P +   L  ++G+      ++   +S+  VE+
Sbjct:  176 LKLLHITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPD-DSLARL-------------FPNLRSISLHKSGLQSWEDIDKLNSFPKLEEVRLLGIPLLQPYTTEERRKLVIARLPSVSKLNGSVVTDGEREDSERFFIRYYVDVPQEEVPFRYHELITKYGKLEPLAEVDLRPQSSAKVEV 348
[Close]
BLAST of EY735908 vs. ExPASy Swiss-Prot
Match: TBCEL_RAT (Tubulin-specific chaperone cofactor E-like protein OS=Rattus norvegicus GN=Tbcel PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.336e-12
Identity = 57/187 (30.48%), Postives = 94/187 (50.27%), Query Frame = 2 
Query:   47 LQLLNLEDNCIAEWSEILKL-CQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEESYLPFQNLCCLLLGSNMIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGKIKILNGSEVSPRERKESEIRYVRLVMSELHDN-PGKIRRLRPRFGER*ECLGIEDERRSADLVEI 601
            L+LL++ DN + EW+EI KL     SL+ L L  N++N I  P  D++  L             F NL  + L  + ++    ID L+SFPKL ++RL   P+  P      R  ++ARL  +  LNGS V+  ER++SE  ++R  +    +  P +   L  ++G+      ++   +S+  VE+
Sbjct:  176 LKLLHITDNNLQEWTEIRKLGVMFPSLDTLVLANNHVNAIEEPA-DSLARL-------------FPNLRSISLHKSGLQSWEDIDKLNSFPKLEEVRLLGIPLLQPYTTEERRKLVVARLPSVSKLNGSVVTDGEREDSERFFIRYYVDVPQEEVPFRYHELITKYGKLEPLAEVDLRPQSSAKVEV 348
[Close]
BLAST of EY735908 vs. ExPASy Swiss-Prot
Match: TBCEL_MOUSE (Tubulin-specific chaperone cofactor E-like protein OS=Mus musculus GN=Tbcel PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.336e-12
Identity = 57/187 (30.48%), Postives = 94/187 (50.27%), Query Frame = 2 
Query:   47 LQLLNLEDNCIAEWSEILKL-CQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEESYLPFQNLCCLLLGSNMIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGKIKILNGSEVSPRERKESEIRYVRLVMSELHDN-PGKIRRLRPRFGER*ECLGIEDERRSADLVEI 601
            L+LL++ DN + +W+EI KL     SL+ L L  N+LN I  P  D++  L             F NL  + L  + ++    ID L+SFPKL ++RL   P+  P      R  ++ARL  +  LNGS V+  ER++SE  ++R  +    +  P +   L  ++G+      ++   +S+  VE+
Sbjct:  176 LKLLHITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPA-DSLARL-------------FPNLRSISLHKSGLQSWEDIDKLNSFPKLEEVRLLGIPLLQPYTTEERRKLVVARLPSVSKLNGSVVTDGEREDSERFFIRYYVDVPQEEVPFRYHELITKYGKLEPLAEVDLRPQSSAKVEV 348
The following BLAST results are available for this feature:
BLAST of EY735908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
TBCEL_HUMAN8.027e-1331.02Tubulin-specific chaperone cofactor E-like protein... [more]
TBCEL_RAT2.336e-1230.48Tubulin-specific chaperone cofactor E-like protein... [more]
TBCEL_MOUSE2.336e-1230.48Tubulin-specific chaperone cofactor E-like protein... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-F01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735908 ID=EY735908; Name=EY735908; organism=Citrus sinensis; type=EST; length=765bp
CACGCGTCCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCTGC
AACTTTTGAACTTAGAAGATAACTGTATAGCTGAATGGAGTGAAATCCTT
AAGCTTTGTCAGATAAGAAGTTTAGAGCAACTTTATCTGAACAAGAACAA
TCTGAATCGTATCTATTATCCGAATAATGATACAATACATGAGCTGGTCA
GTGCACATGAATCTCATGAAGAAAGCTACTTGCCGTTTCAGAATCTGTGC
TGCCTTCTTCTGGGGAGTAATATGATTGAAGATCTGGCTTCAATTGACTC
ACTGGATTCCTTTCCGAAGTTGATGGATATCAGGCTTTCTGAGAACCCTG
TATCTGATCCAGGAAGGGGTGGTATCTCCAGATTTGCAATAATTGCACGA
TTAGGAAAGATTAAAATACTAAATGGGAGTGAGGTTAGCCCTCGTGAAAG
GAAGGAATCTGAGATCCGGTATGTTCGCTTAGTTATGTCAGAGTTACATG
ATAATCCTGGAAAAATCAGGCGACTACGTCCTAGGTTTGGTGAGCGTTAG
GAATGCCTCGGGATTGAGGATGAGAGGCGCTCAGCCGATCTGGTGGAGAT
CGGACGTGTCCTCGGGACGCTCCCCGACCATCCGGACGGGGGGGCGGCTC
CGAGTGGGGGGAGCCCCTGCTGAGGAAAAATTGGCCGCCCACTGACAAAG
GGGCGAGCGCGAATGTGTGGGAGAGGCTGCGGCGTGAGGGGAAGTGGAGC
GGGCCTAGATGATTC
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