CX047717
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047717 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 1.203e-76 Identity = 143/149 (95.97%), Postives = 146/149 (97.99%), Query Frame = -3 Query: 358 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKINQPD 804 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSI RDIKQRL+DTDSRAEP TIKI+Q D Sbjct: 51 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDSRAEPATIKISQTD 199
BLAST of CX047717 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 1.797e-72 Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = -3 Query: 382 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 804 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD+D+R E Q Sbjct: 51 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEAQ 191
BLAST of CX047717 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 6.206e-57 Identity = 108/144 (75.00%), Postives = 128/144 (88.89%), Query Frame = -3 Query: 373 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIK 804 DFKIRTIEL+GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIRNWIRNIEQHA+D+VNK+L+GNK DM E K+ V +S+G++LADEYGIKF ETSAK ++NVEE F S+A+DIK+R+ DT + +PQ ++ Sbjct: 51 DFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAE-KKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTPNE-QPQVVQ 192
BLAST of CX047717 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.529e-55 Identity = 105/134 (78.36%), Postives = 121/134 (90.30%), Query Frame = -3 Query: 403 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 804 DFKIRTIEL+GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SF +IRNWIRNIEQHASD+VNK+L+GNK DM E K+ V +S+G++LADEYGIKF ETSAK ++NVEE F +A+DIK+R+ DT Sbjct: 51 DFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDMTE-KKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKKRMIDT 183
BLAST of CX047717 vs. ExPASy Swiss-Prot
Match: YPTV2_VOLCA (GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.602e-52 Identity = 92/131 (70.23%), Postives = 116/131 (88.55%), Query Frame = -3 Query: 412 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 804 DFKI+ +++DGK +KLQIWDTAGQERFRTIT+AYYRGA GI+LVYD+TDE+SFNN+RNW+RNIEQHASDNVNKILVGNK D+ E KR V ++GQALADE+G +F+ETSAK N++VEE F ++A+D+ R+ Sbjct: 49 DFKIKKVDVDGKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDNVNKILVGNKLDLAEDKRVVSIARGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARM 179
BLAST of CX047717 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.284e-51 Identity = 98/146 (67.12%), Postives = 119/146 (81.51%), Query Frame = -3 Query: 367 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKIN 804 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILL+YDVTD+ SF+N+R W N+EQHAS+NV KIL+GNK D E +R V +GQALADE G+KF E SAKTN+NV+E FF++AR+IK++ D ++ Q ++ Sbjct: 45 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDC-EDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSNQANNVD 189
BLAST of CX047717 vs. ExPASy Swiss-Prot
Match: RAB8A_MACFA (Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.525e-50 Identity = 101/153 (66.01%), Postives = 123/153 (80.39%), Query Frame = -3 Query: 358 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSRAEPQTIKINQPD 804 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L + Q +KI PD Sbjct: 44 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKIT-PD 194
BLAST of CX047717 vs. ExPASy Swiss-Prot
Match: RAB8A_HUMAN (Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.525e-50 Identity = 101/153 (66.01%), Postives = 123/153 (80.39%), Query Frame = -3 Query: 358 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSRAEPQTIKINQPD 804 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L + Q +KI PD Sbjct: 44 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKIT-PD 194
BLAST of CX047717 vs. ExPASy Swiss-Prot
Match: RAB8A_CANFA (Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.525e-50 Identity = 101/153 (66.01%), Postives = 123/153 (80.39%), Query Frame = -3 Query: 358 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSRAEPQTIKINQPD 804 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L + Q +KI PD Sbjct: 44 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKIT-PD 194
BLAST of CX047717 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2) HSP 1 Score: 198.749 bits (504), Expect = 3.298e-50 Identity = 95/131 (72.52%), Postives = 115/131 (87.79%), Query Frame = -3 Query: 412 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 804 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++ Sbjct: 44 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173 The following BLAST results are available for this feature:
BLAST of CX047717 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047717 ID=CX047717; Name=CX047717; organism=Citrus sinensis; type=EST; length=845bpback to top |