CX047673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047673 vs. ExPASy Swiss-Prot
Match: SUI1_SPOST (Protein translation factor SUI1 homolog OS=Sporobolus stapfianus PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.849e-33 Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 1 Query: 1 LTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 210 LTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAGIVKKEHIK+HGF Sbjct: 46 LTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CX047673 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSJ (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica GN=GOS2 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.849e-33 Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 1 Query: 1 LTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 210 LTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAGIVKKEHIK+HGF Sbjct: 46 LTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CX047673 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSI (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica GN=GOS2 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.849e-33 Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 1 Query: 1 LTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 210 LTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAGIVKKEHIK+HGF Sbjct: 46 LTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CX047673 vs. ExPASy Swiss-Prot
Match: SUI1_MAIZE (Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 7.025e-33 Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 1 Query: 1 LTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 210 LTTVQGLKKEFSY+KILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAGIVKKEHIK+HGF Sbjct: 46 LTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CX047673 vs. ExPASy Swiss-Prot
Match: SUI1_SALBA (Protein translation factor SUI1 homolog OS=Salix bakko PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 4.554e-32 Identity = 65/70 (92.86%), Postives = 70/70 (100.00%), Query Frame = 1 Query: 1 LTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 210 LTTVQGLKK++SYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS+FLVQAGIVKKE+IK+HGF Sbjct: 44 LTTVQGLKKDYSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKKENIKIHGF 113
BLAST of CX047673 vs. ExPASy Swiss-Prot
Match: SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.588e-31 Identity = 63/70 (90.00%), Postives = 69/70 (98.57%), Query Frame = 1 Query: 1 LTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 210 LTTVQGLKKE+SY+KILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK++IK+HGF Sbjct: 44 LTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
BLAST of CX047673 vs. ExPASy Swiss-Prot
Match: SUI11_ARATH (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana GN=At4g27130 PE=2 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 1.122e-30 Identity = 63/70 (90.00%), Postives = 68/70 (97.14%), Query Frame = 1 Query: 1 LTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 210 LTTVQGLKKE+SY KILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK++IK+HGF Sbjct: 44 LTTVQGLKKEYSYTKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
BLAST of CX047673 vs. ExPASy Swiss-Prot
Match: SUI1_BRAOL (Protein translation factor SUI1 homolog OS=Brassica oleracea PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 5.566e-30 Identity = 62/70 (88.57%), Postives = 67/70 (95.71%), Query Frame = 1 Query: 1 LTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 210 LTTVQGLKKE+SY KILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK+ I++HGF Sbjct: 44 LTTVQGLKKEYSYTKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113
BLAST of CX047673 vs. ExPASy Swiss-Prot
Match: SUI1_PIMBR (Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.377e-27 Identity = 58/70 (82.86%), Postives = 63/70 (90.00%), Query Frame = 1 Query: 1 LTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 210 LTTVQGLKKE SY+KILKDLKK CCNGTVV D ELG+VIQLQGDQRKNVSTF+VQAGIVKK+ IK+H F Sbjct: 44 LTTVQGLKKELSYDKILKDLKKALCCNGTVVNDKELGKVIQLQGDQRKNVSTFIVQAGIVKKDQIKVHNF 113
BLAST of CX047673 vs. ExPASy Swiss-Prot
Match: EIF1B_PIG (Eukaryotic translation initiation factor 1b OS=Sus scrofa GN=EIF1B PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.163e-19 Identity = 41/70 (58.57%), Postives = 56/70 (80.00%), Query Frame = 1 Query: 1 LTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKMHGF 210 LTTVQG+ ++ K++K KK+F CNGTV++ PE G+VIQLQGDQRKN+ FL++ GIVK+E +K+HGF Sbjct: 44 LTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113 The following BLAST results are available for this feature:
BLAST of CX047673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047673 ID=CX047673; Name=CX047673; organism=Citrus sinensis; type=EST; length=266bpback to top |