CX047546

Overview
NameCX047546
Unique NameCX047546
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047546 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 5.552e-88
Identity = 147/242 (60.74%), Postives = 186/242 (76.86%), Query Frame = -1
Query:  161 GLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRG---RGMCGMNTMVSAV 877
            G  +    ++  DGLP++FDWRD GAV  VK QG+CGSCW+FS +GA+EGA+++ATG L  LSEQQ VDCDH CD  E  +CD+GC+GGLMT A+ YL  AGGLE E  YPY G  GKC+FD  KI   V NF+ + VDE QI+A+L+ HGPLAIG+NA +MQTYIGGVSCP ICG+  L+HGVLLVGYGA GF+ +RL ++P+WIIKNSWG+ WG++GYY++CRG   R  CG+++MVS V
Sbjct:  123 GESAHEAPVLPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDGKCKFDKSKIVASVQNFSVVSVDEAQISANLIKHGPLAIGINAAYMQTYIGGVSCPYICGRH-LDHGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMVSTV 363          
BLAST of CX047546 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 4.700e-87
Identity = 143/244 (58.61%), Postives = 191/244 (78.28%), Query Frame = -1
Query:  143 ESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGK-CQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAVVTQASS 871
            +++   ++  + LPE+FDWRD GAVT VK QG+CGSCW+FS TGA+EGANF+ATG L+SLSEQQLVDCDH CD +E  +CD+GC+GGLM +A++Y +  GGL +E  YPY GK GK C+ D  KI   V+NF+ I +DE QIAA+LV +GPLA+ +NA +MQTYIGGVSCP IC ++ LNHGVLLVGYGA G++  R   +P+WIIKNSWG+ WG++G+Y++C+GR +CG+++MVS V    S+
Sbjct:  123 DANKAPILPTENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGGVSCPYICTRR-LNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSMVSTVAATVST 365          
BLAST of CX047546 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 4.700e-87
Identity = 137/231 (59.31%), Postives = 187/231 (80.95%), Query Frame = -1
Query:  143 LPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAVVTQASS 835
            LPE+FDWR+KGAVT VK QG+CGSCWAFSTTGA+EGA+++ATG L+SLSEQQLVDCDH CD ++ G+CD+GC+GGLM NA++YL+ +GG+ +E  Y Y G+ G C+FD  K+   V+NF+ + +DE+QIAA+LV +GPLA+ +NA +MQTY+ GVSCP +C K  L+HGVLLVG+G   ++ +RL  +P+WIIKNSWG+ WG+ GYY++CRGR +CG+++MVS V    S+
Sbjct:  132 LPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRDGSCKFDKSKVVASVSNFSVVTLDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSCPYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVDSMVSTVAAAQSN 362          
BLAST of CX047546 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 320.857 bits (821), Expect = 6.138e-87
Identity = 140/243 (57.61%), Postives = 191/243 (78.60%), Query Frame = -1
Query:  146 ESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIG-KRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAVVTQAS 871
            +++   ++    LPE FDWRD+GAVT VK QG+CGSCW+FSTTGA+EGA+F+ATG L+SLSEQQLVDCDH CD +E+G+CD+GC+GGLM +A++Y +  GGL  E  YPY G   G C+ D  KI   V+NF+ + ++E+QIAA+L+ +GPLA+ +NA +MQTYIGGVSCP IC ++ LNHGVLLVGYG+ GFS  RL  +P+WIIKNSWG+ WG++G+Y++C+GR +CG++++VS V    S
Sbjct:  120 DANQAPILPTQNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGGVSCPYICSRR-LNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLVSTVAATTS 361          
BLAST of CX047546 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 3.278e-64
Identity = 119/231 (51.52%), Postives = 157/231 (67.97%), Query Frame = -1
Query:  158 IDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSC-DIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRG-KCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAVV 844
            I+ +P  FDWR +GAVT VK QG CGSCW+FSTTG VEG +FI+   L+SLSEQ LVDCDH C + + +  CD GC+GGL  NAY Y+I  GG++ ESSYPY  + G +C F+S  I  +++NFT IP +E  +A ++V  GPLAI  +A+  Q YIGGV   + C    L+HG+L+VGY AK  +I R  N P+WI+KNSWG  WG+ GY  L RG+  CG++  VS  +
Sbjct:  115 INSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGV-FDIPCNPNSLDHGILIVGYSAKN-TIFR-KNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSI 342          
BLAST of CX047546 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.733e-63
Identity = 116/232 (50.00%), Postives = 157/232 (67.67%), Query Frame = -1
Query:  158 EIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCP--LICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAVV 847
            E++ +P+NFDWR+KGAVTEVK QG CGSCWAFSTTG VE   F  TG LLSLSEQQLVDCD           D+GC+GGL +NAY+ +I  GGL  E +YPY  K  KC   ++ +AV + +  N+  DE ++AA L H+  +++G+NA+ +Q Y  G+S P  + C K  L+H VLLVGYG          N+PFWI+KNSWG +WG++GY+R+ RG G CG+NT+ ++ +
Sbjct:  101 EVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCD---------GLDDGCNGGLPSNAYESIIKMGGLMLEDNYPYDAKNEKCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSE------KNEPFWIVKNSWGVEWGENGYFRMYRGDGSCGINTVATSAM 317          
BLAST of CX047546 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 2.275e-57
Identity = 111/229 (48.47%), Postives = 148/229 (64.63%), Query Frame = -1
Query:  158 LPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCP--LICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAVV 835
            LP+ FDWR K AVT+VK QG+CGSCWAFS TG +EG   + TG L   SEQ+L+DCD         T D+ C+GGLM NAYK +   GGLE E+ YPY  K+ +C F+     V+VA F ++P  +E  +   L+ +GP++IG+NA  MQ Y GGVS P   +C KK L+HGVL+VGYG   +        P+WI+KNSWG +WG+ GYYR+ RG   CG++ M ++ V
Sbjct:  394 LPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFH-KTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAV 612          
BLAST of CX047546 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.075e-54
Identity = 110/230 (47.83%), Postives = 137/230 (59.57%), Query Frame = -1
Query:  158 DGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPL--ICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAVV 841
            D  P  +DWR KGAVT+VK QG CGSCWAFS TG VEG  F+  G LLSLSEQ+L+DCD           D  C GGL +NAY  +   GGLE E  Y Y G    C F +EK  V + +   +  +E ++AA L   GP+++ +NA  MQ Y  G+S PL  +C    ++H VLLVGYG +        + PFW IKNSWG  WG+ GYY L RG G CG+NTM S+ V
Sbjct:  269 DLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCD---------KMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAV 482          
BLAST of CX047546 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 8.946e-54
Identity = 109/230 (47.39%), Postives = 137/230 (59.57%), Query Frame = -1
Query:  158 DGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPL--ICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAVV 841
            D  P  +DWR KGAVTEVK QG CGSCWAFS TG VEG  F+  G LLSLSEQ+L+DCD           D  C GGL +NAY  +   GGLE E  Y Y G    C F ++   V + +   +  +EN+IAA L   GP+++ +NA  MQ Y  G++ P   +C   +++H VLLVGYG +        N P+W IKNSWG  WG+ GYY L RG G CG+NTM S+ V
Sbjct:  247 DLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCD---------KVDKACLGGLPSNAYAAIKNLGGLETEDDYGYQGHVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNR-------SNIPYWAIKNSWGSDWGEEGYYYLYRGSGACGVNTMASSAV 460          
BLAST of CX047546 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.694e-50
Identity = 104/230 (45.22%), Postives = 140/230 (60.87%), Query Frame = -1
Query:  158 PENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAA--GGLEEESSYPYI---GKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAVV 832
            P   DWR+KGAVT VK+QG CGSCWAFST G +EG   +A   L+SLSEQ LV CD         T D+GC+GGLM NA+ +++ +  G +  E+SYPY+   G++ +CQ +  +I   + +  ++P DE+ IAA+L  +GPLAI ++A     Y GG+     C  K L+HGVLLVGY           N P+WIIKNSW   WG+ GY R+ +G   C MN  VS+ V
Sbjct:  127 PAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDAESFMDYNGGILTS--CTSKQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAV 338          
The following BLAST results are available for this feature:
BLAST of CX047546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
CYSP1_MAIZE5.552e-8860.74Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
RD19A_ARATH4.700e-8758.61Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
CYSP_PEA4.700e-8759.31Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
A494_ARATH6.138e-8757.61Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CYSP1_DICDI3.278e-6451.52Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATL_SCHMA4.733e-6350.00Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CPR1_DROME2.275e-5748.47Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATF_HUMAN3.075e-5447.83Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CATF_MOUSE8.946e-5447.39Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
CYSP_TRYBB2.694e-5045.22Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14G08_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14G08-N15-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047546 ID=CX047546; Name=CX047546; organism=Citrus sinensis; type=EST; length=877bp
TTTTTTTTTATGAAACCGGAAAAGCTTCAATAATTAGAAGATCACGAACA
AGAACAAAAGGGAAACTAGCTACCATTTAACATGAGCTGTCTATATTGCT
TTCTGTAGATATTCCAACTTAATAAGAGGGACTTCAAGTTTAGGAGGAGG
CTTGAGTGACCACTGCAGAAACCATGGTGTTCATTCCACACATGCCACGC
CCTCGGCAGAGCCGGTAGTACCCATGGTCTCCCCATTGCTTGCCCCACGA
ATTCTTGATGATCCAAAACGGCTGGTTTCCAAGCCTAAGAATTGAGAAGC
CCTTGGCACCATACCCGACAAGCAGAACGCCGTGGTTGAGCCATTTCTTG
CCGCAGATTAGGGGGCATGAGACTCCCCCAATGTATGTTTGCATGAATAT
AGCGTTCAACCCAATAGCCAGAGGACCGTGGTGGACTAAATGTGCAGCAA
TTTGGTTCTCATCGACAGGAATATTGGTAAAATTTGCAACTCGAACGGCT
ATTTTCTCTGAATCGAATTGGCATTTGCCACGCTTCCCAATATAAGGATA
TGAACTCTCCTCTTCTAGCCCTCCAGCCGCGATCAAATATTTGTATGCAT
TTGTCATGAGGCCTCCAGAACAACCATTGTCACAAGTACCCTTCTCCTTT
ATATCACACGAGTGATCACAATCTACAAGCTGCTGCTCGCTAAGACTCAG
AAGATTCCCAGTCGCAATGAAGTTGGCTCCTTCAACAGCTCCTGTAGTGC
TAAAAGCCCAGCATGACCCACATGCTCCCTGCATCTTGACCTCAGTGACA
GCACCTTTGTCTCTCCAATCAAAATTCTCAGGCAATCCATCAATCTCCAT
CATCTTTACACTACTACTCTCCAAACC
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