CX047333
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX047333 vs. ExPASy Swiss-Prot
Match: ARNA_KLEP3 (Bifunctional polymyxin resistance protein arnA OS=Klebsiella pneumoniae (strain 342) GN=arnA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.051e-12 Identity = 39/113 (34.51%), Postives = 62/113 (54.87%), Query Frame = -2 Query: 558 IKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 887 I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + + + +V S ++YG+GY D + R P + + L W PK + + +E TL + RT Sbjct: 540 ISDGIEALFRIIENKDGRCDGQIINIGNPENEASIKELAEMLLACFERHPLRDRFPPFAGFREVESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFFLRT 652
BLAST of CX047333 vs. ExPASy Swiss-Prot
Match: ARNA_KLEP7 (Bifunctional polymyxin resistance protein arnA OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=arnA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.597e-12 Identity = 39/113 (34.51%), Postives = 62/113 (54.87%), Query Frame = -2 Query: 558 IKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 887 I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + + + +V S ++YG+GY D + R P + + L W PK + + +E TL + RT Sbjct: 540 ISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDRFPPFAGFREVESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFFLRT 652
BLAST of CX047333 vs. ExPASy Swiss-Prot
Match: ARNA_SERP5 (Bifunctional polymyxin resistance protein arnA OS=Serratia proteamaculans (strain 568) GN=arnA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.276e-11 Identity = 40/113 (35.40%), Postives = 58/113 (51.33%), Query Frame = -2 Query: 558 IKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 887 I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ E + + DV S +YG+GY D + R P + + L W P ++ + TL Y RT Sbjct: 540 INDGIEALFRIIENRDGLCDGQIVNIGNPTNEASIRELAEMLLESFNNHPLRDRFPPFAGFKDVESSSYYGKGYQDVEHRTPSIKNARRLLDWQPTIAMQQTVADTLDYFLRT 652
BLAST of CX047333 vs. ExPASy Swiss-Prot
Match: ARNA_ERWCT (Bifunctional polymyxin resistance protein arnA OS=Erwinia carotovora subsp. atroseptica GN=arnA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.276e-11 Identity = 39/113 (34.51%), Postives = 57/113 (50.44%), Query Frame = -2 Query: 558 IKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 887 I D IEA+ +IEN + +G I N+GNPHNE ++R+L EM+ + + +DV S +YG+GY D R P + + L W P + + TL Y RT Sbjct: 547 IHDGIEALFRVIENRNGQCDGQIINIGNPHNEASIRELGEMLLTSFNAHPLRDRFPPFAGFIDVESSSYYGKGYQDVAHRTPSIRNAKRLLEWEPTVKMEQTVAETLDYFLRT 659
BLAST of CX047333 vs. ExPASy Swiss-Prot
Match: ARNA_PSEU2 (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas syringae pv. syringae (strain B728a) GN=arnA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.585e-11 Identity = 38/109 (34.86%), Postives = 56/109 (51.38%), Query Frame = -2 Query: 570 IKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 887 + D IEA+ +IEN R NG I N+GNP NE ++RQL E + + + G +V S+ FYG+GY D R P + + +GW P L + + TL + Sbjct: 543 VVDGIEALARIIENRDGRCNGQIINIGNPDNEASIRQLGEELLRQFEAHPLRGHFPPFAGFREVESQSFYGKGYQDVSHRTPSIDNAKKLIGWTPGIELSETIGKTLDF 651
BLAST of CX047333 vs. ExPASy Swiss-Prot
Match: ARNA_ERWT9 (Bifunctional polymyxin resistance protein arnA OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=arnA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.585e-11 Identity = 37/109 (33.94%), Postives = 59/109 (54.13%), Query Frame = -2 Query: 570 IKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 887 I D IEA+ L+IEN + +G I N+GNP NE +++QLAE + E + + + +V S +YG+GY D + R P + Q L W P ++ ++ TL + Sbjct: 540 IHDGIEALFLIIENKQKNCDGQIINIGNPENEASIKQLAEQLLESFERHPLRDRFPPFAGFREVESSTYYGKGYQDVEHRKPSIRNAKQLLNWQPTIAMDKTIDDTLDF 648
BLAST of CX047333 vs. ExPASy Swiss-Prot
Match: ARNA_WIGBR (Bifunctional polymyxin resistance protein arnA OS=Wigglesworthia glossinidia brevipalpis GN=arnA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.294e-11 Identity = 40/116 (34.48%), Postives = 59/116 (50.86%), Query Frame = -2 Query: 570 IKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEV---------YAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 887 I D IEA+ +I+N + N I N+GNPHNE T+ QL +++ + + K SG L S +YGEGY D D+R P++ I + L W PKT + L + + Sbjct: 539 IDDGIEALFEIIKNKNNKCNKKIINIGNPHNEYTIMQLTKIIINIIYSNNRNYNFPKFSGFNML-------SGTNYYGEGYQDIDRRKPNIDIAKKLLNWTPKTKIRITLRKIINF 647
BLAST of CX047333 vs. ExPASy Swiss-Prot
Match: ARNA_PROMH (Bifunctional polymyxin resistance protein arnA OS=Proteus mirabilis (strain HI4320) GN=arnA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.294e-11 Identity = 39/118 (33.05%), Postives = 60/118 (50.85%), Query Frame = -2 Query: 543 IKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAI 887 I D IEA+ +IEN + +G I N+GNP NE ++R+LAEM+ + + K + G + S +YG+GY D + R P + + L W P +E TL + R E + Sbjct: 540 INDGIEALFRIIENRDNKCDGQIINIGNPTNEASIRELAEMLLDCFEKHELRGHFPPFAGFKKIESSSYYGKGYQDVEHRKPSIKNAERLLDWKPTIETRQTVEETLDFFLRGAVEEL 657
BLAST of CX047333 vs. ExPASy Swiss-Prot
Match: ARNA_ECO7I (Bifunctional polymyxin resistance protein arnA OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=arnA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.294e-11 Identity = 41/128 (32.03%), Postives = 64/128 (50.00%), Query Frame = -2 Query: 534 IKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK---------VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAIKQA 887 I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K +G +E S +YG+GY D + R P + + L W PK + + ++ TL + RT KQ+ Sbjct: 540 IRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVE-------SSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFLRTVDLTDKQS 660
BLAST of CX047333 vs. ExPASy Swiss-Prot
Match: ARNA_SHIDS (Bifunctional polymyxin resistance protein arnA OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=arnA PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 9.526e-11 Identity = 39/120 (32.50%), Postives = 62/120 (51.67%), Query Frame = -2 Query: 558 IKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK---------VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 887 I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K +G +E S +YG+GY D + R P + ++ L W PK + + ++ TL + RT Sbjct: 540 IRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVE-------SSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT 652 The following BLAST results are available for this feature:
BLAST of CX047333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047333 ID=CX047333; Name=CX047333; organism=Citrus sinensis; type=EST; length=888bpback to top |