CX047073

Overview
NameCX047073
Unique NameCX047073
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX047073_ssr132 microsatellite CX047073_ssr132:132..143. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig3822 contig Csv1_Contig3822:324..1219. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX047073 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 380.948 bits (977), Expect = 5.169e-105
Identity = 183/246 (74.39%), Postives = 205/246 (83.33%), Query Frame = -1
Query:  156 PVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGEYKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRRTQDALL 893
            P+E+KEKYAN+QASGKIQGYGSKLANNASGQLEWEDYFFH +YPEDKRD+SIWP+TP+DY EAT+EYA+QLR LATK+L V                       LQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFY+ KWVTAKCVPNSI++HIGDT+EILSNG+YKSILHRG+VNKEKVRISWAVFCE           PETVSE +PAMFPPRTF +HI+HKLFR++Q+ALL
Sbjct:  110 PIEQKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPNSIVMHIGDTLEILSNGKYKSILHRGMVNKEKVRISWAVFCEPPKEKIILKPLPETVSEDEPAMFPPRTFAEHIQHKLFRKSQEALL 355          
BLAST of CX047073 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 364.77 bits (935), Expect = 3.833e-100
Identity = 180/248 (72.58%), Postives = 198/248 (79.84%), Query Frame = -1
Query:  147 VEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGEYKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRRTQDALLSDE 890
            VEEKEKYAN+QA+GKIQGYGSKLANNASGQLEWEDYFFHL YPE+KRD+SIWPKTPSDY EATSEYA+ LR LATK+                          LQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFY+ KWVTAKCVP+SI++HIGDT+EILSNG+YKSILHRGLVNKEKVRISWAVFCE           PE VS + PA FPPRTF QHIEHKLF + Q+ L+S++
Sbjct:  107 VEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELVSEK 354          
BLAST of CX047073 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 357.836 bits (917), Expect = 4.686e-98
Identity = 173/241 (71.78%), Postives = 193/241 (80.08%), Query Frame = -1
Query:  174 QPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGEYKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRR 896
            QPVEEKEKYAN+QA+G +QGYGSKLAN+A GQLEWEDYFFH  +PEDKRD+SIWPK P+DYT ATSEYA+Q+R+LATKIL V                       LQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFY+ +WVTAKCVPNSII+HIGDTIEILSNG+YKSILHRG+VNKEKVR SWA+FCE           PETV+E +P  FPPRTF QH+ HKLFR+
Sbjct:  109 QPVEEKEKYANDQANGNVQGYGSKLANSACGQLEWEDYFFHCAFPEDKRDLSIWPKNPTDYTPATSEYAKQIRALATKILTVLSIGLGLEEGRLEKEVGGMEDLLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGQWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGVVNKEKVRFSWAIFCEPPKEKIILKPLPETVTEAEPPRFPPRTFAQHMAHKLFRK 349          
BLAST of CX047073 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 357.451 bits (916), Expect = 6.120e-98
Identity = 175/245 (71.43%), Postives = 193/245 (78.78%), Query Frame = -1
Query:  159 PVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGEYKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRRTQDAL 893
            PVEEKE YAN+QA+G +QGYGSKLANNASGQLEWEDYFFH +YPE K D+SIWP  P DY  ATSEYA+QLR+LATKIL+V                       +QMKIN+YPKCPQPELALG EAHTDVSALTFILHNMVPGLQLFY+DKWVTAKCVPNSII+HIGDT+EILSNG+YKSILHRGLVNKEKVRISWAVFCE           PETVSE +P  FPPRTF QH++HKLFR+T   L
Sbjct:  112 PVEEKEAYANDQAAGNVQGYGSKLANNASGQLEWEDYFFHCVYPEHKTDLSIWPTKPPDYIPATSEYAKQLRALATKILSVLSIGLGLEKGRLEKEVGGAEDLIVQMKINFYPKCPQPELALGWEAHTDVSALTFILHNMVPGLQLFYEDKWVTAKCVPNSIIMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKEKIVLQPLPETVSEVEPPRFPPRTFAQHLKHKLFRKTDGDL 356          
BLAST of CX047073 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 5.193e-89
Identity = 161/201 (80.10%), Postives = 171/201 (85.07%), Query Frame = -1
Query:  291 PVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGEYKSILHRGLVNKEKVRISWAVFCE 893
            P+EEKEKYAN+QASGKI GYGSKLANNASGQLEWEDYFFHLI+PEDKRDM+IWPKTPSDY  AT EY+ +LRSLATKIL+V                       LQ KINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFY+ KWVTAKCVPNSII+HIGDTIEILSNG+YKSILHRGLVNKEKVRISWAVFCE
Sbjct:  112 PMEEKEKYANDQASGKIAGYGSKLANNASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLGLEEGRLEKEVGGMEELLLQKKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGLVNKEKVRISWAVFCE 312          
BLAST of CX047073 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.739e-71
Identity = 131/259 (50.58%), Postives = 169/259 (65.25%), Query Frame = -1
Query:  144 PVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXL---------QMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGEYKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRRTQDALLSDEE 893
            PV++KE YAN+ A+G++QGYGS+LA N  GQ EWEDY FHL++P+   D ++WP  P DY  AT ++ R+ R LA+ +LA+                                 Q+KINYYP+CPQPELA+GVEAHTDVSAL+FILHN VPGLQ+ +  +WVTA+  P +II+H+GD +EILSNG Y S+LHRGLVN+E VRISW VFCE           PE V+E  PA F PRTF+QH++ KLF++ Q      EE
Sbjct:  119 PVQDKEAYANDPAAGRLQGYGSRLATNTCGQREWEDYLFHLVHPDGLADHALWPAYPPDYIAATRDFGRRTRDLASTLLAILSMGLLGTDRGDALEKALTTTTTRTAADDDLLLQLKINYYPRCPQPELAVGVEAHTDVSALSFILHNGVPGLQVLHGARWVTARHEPGTIIVHVGDALEILSNGRYTSVLHRGLVNREAVRISWVVFCEPPPDSVLLHPLPELVTEGHPARFTPRTFKQHLDRKLFKKKQQHKAKAEE 377          
BLAST of CX047073 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.996e-48
Identity = 96/242 (39.67%), Postives = 136/242 (56.20%), Query Frame = -1
Query:  168 PVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGEYKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRRTQ 893
            P EEKE Y+    +  +QGYG+KL     G+  W D+ FH ++P    +   WPK P  Y     EYA+ +R +  K+                            +KINYYP CP+P+LALGV AHTD+SALT ++ N VPGLQ+F  D+W+ AK +PN++++HIGD IEILSNG+YK++LHR  VNK+K R+SW VF E           P+ V ++ P  +  + F+ +   KL +  Q
Sbjct:   96 PQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPKNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGVEGGVLKEAAGGDDIEY-MLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLE-PPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ 335          
BLAST of CX047073 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.066e-45
Identity = 98/242 (40.50%), Postives = 136/242 (56.20%), Query Frame = -1
Query:  168 PVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGEYKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRRTQ 893
            P EEKE  A  + S  I+GYG++L     G+  W D+ FH I+P    +   WPK P  Y EA  EYA++L+ +   +                          L MKINYYP CP+P+LALGV AHTD+SA+T ++ N VPGLQ++    W   K +PN++I+HIGD +EI+SNG+YKS+ HR  VNKEK R+SW VF E           P+ V+E+ PA F  + ++ +   KL +  Q
Sbjct:   96 PQEEKELIAKPEGSQSIEGYGTRLQKEVDGKKGWVDHLFHKIWPPSAINYQFWPKNPPAYREANEEYAKRLQLVVDNLFKYLSLGLDLEPNSFKDGAGGDDLVYL-MKINYYPPCPRPDLALGV-AHTDMSAITVLVPNEVPGLQVYKDGHWYDCKYIPNALIVHIGDQVEIMSNGKYKSVYHRTTVNKEKTRMSWPVFLE-PPPDHEVGPIPKLVNEENPAKFKTKKYKDYAYCKLNKLPQ 334          
BLAST of CX047073 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.524e-45
Identity = 92/242 (38.02%), Postives = 134/242 (55.37%), Query Frame = -1
Query:  168 PVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGEYKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRRTQ 893
            P +EKE  A  +    ++GYG+KL     G+  W D+ FH+I+P+   + + WP  P  Y EA  EYA  LR +  K+                            +KINYYP CP+P+LALGV AHTD+SA+T ++ N V GLQ+   D W   K +PN++I+HIGD IEI+SNG+YKS+ HR  VNK+K R+SW VF E            + ++++ PA F  + ++ ++  KL +  Q
Sbjct:   98 PQQEKEVIAKPEGYQGVEGYGTKLQKELGGKKGWVDHLFHIIWPKSAVNYNFWPNNPPLYREANEEYAVALRGVVDKLFEALSLGIGLEKHELKKASGGDDLIY-MLKINYYPPCPRPDLALGVVAHTDMSAITILVPNEVQGLQVHKDDHWYDVKYIPNALIIHIGDQIEIMSNGKYKSVYHRTTVNKDKTRMSWPVFLE-PPPELLTGPISKLITDENPAKFKTKKYKDYVYCKLNKLPQ 337          
BLAST of CX047073 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.602e-45
Identity = 95/237 (40.08%), Postives = 129/237 (54.43%), Query Frame = -1
Query:  183 PVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGEYKSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKL 893
            P  EKE  A  + S  I+GYG+KL  +  G+  W D+ FH I+P    +   WPK P +Y E   EYA  ++ L+  +L +                         MKINYYP CP+P+LALGV AHTD+S +T ++ N VPGLQ+F  D W  A+ +P+++I+HIGD I  LSNG YK++LHR  V+KEK R+SW VF E           PE   +  P  F P  F+ +   KL
Sbjct:   96 PSSEKESVAKPEDSKDIEGYGTKLQKDPEGKKAWVDHLFHRIWPPSCVNYRFWPKNPPEYREVNEEYAVHVKKLSETLLGILSDGLGLKRDALKEGLGGEMAEY-MMKINYYPPCPRPDLALGVPAHTDLSGITLLVPNEVPGLQVFKDDHWFDAEYIPSAVIVHIGDQILRLSNGRYKNVLHRTTVDKEKTRMSWPVFLE-PPREKIVGPLPELTGDDNPPKFKPFAFKDYSYRKL 330          
The following BLAST results are available for this feature:
BLAST of CX047073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
LDOX_MALDO5.169e-10574.39Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
LDOX_ARATH3.833e-10072.58Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
LDOX_PETHY4.686e-9871.78Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
LDOX_PERFR6.120e-9871.43Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
LDOX_VITVI5.193e-8980.10Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
LDOX_MAIZE3.739e-7150.58Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
FLS_CITUN1.996e-4839.67Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
FLS_EUSGR2.066e-4540.50Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
FLS_PETCR3.524e-4538.02Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
FLS1_ARATH4.602e-4540.08Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A02_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A02-A3-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047073 ID=CX047073; Name=CX047073; organism=Citrus sinensis; type=EST; length=896bp
TTTCACGAAAATAATCAATCTGATTATTCAATAAAGCCAGCCGGTACAGA
CGAAACAAAGAGCCAAAAATATGGCCTACAAGTACTGTAGTGAAAGCATT
CACCGGAAGATTAAACATAATAAGAAATCCGATTAATTAATTATTCTTCA
TCGGAGAGGAGAGCATCCTGCGTCCTCCTAAACAGCTTGTGCTCAATGTG
CTGTTGAAAGGTGCGAGGAGGGAACATTGCCGGCTTTTGCTCAGAGACAG
TTTCCGGGAGAGGCTTGAGGATAATCTTGTCCTTCGGTGGCTCACAGAAA
ACAGCCCATGAGATCCTAACCTTTTCCTTGTTAACAAGTCCCCTGTGAAG
AATACTCTTGTACTCGCCATTGCTCAGAATTTCAATGGTGTCACCAATGT
GCAAGATGATCGAATTTGGAACACATTTAGCAGTCACCCATTTGTCTTTG
TAGAAGAGCTGCAGGCCCGGAACCATGTTGTGAAGAATGAAAGTGAGTGC
ACTCACATCTGTGTGAGCTTCAACACCAAGAGCCAGTTCTGGTTGAGGGC
ATTTGGGATAGTAATTGATCTTCATCTGAAGAAGGAGCTCTTCTAGGCCA
CCAACTTCCTTTTCCAGCCTCCCCTCTTCCAGTCCCAAGCCAAGTGACAA
CACTGCCAGAATTTTCGTCGCTAGGCTTCTCAGTTGCCTTGCGTATTCAC
TGGTAGCCTCTGTATAGTCGCTTGGAGTCTTAGGCCAAATGGACATATCC
CTTTTATCTTCAGGATAAATAAGGTGGAAGAAATAGTCCTCCCACTCAAG
CTGGCCACTAGCATTATTAGCTAGCTTGCTTCCGTAACCCTGAATCTTTC
CCGAAGCCTGCTCATTGGCATACTTCTCTTTCTCCTCAACCGGCTG
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