CX047054

Overview
NameCX047054
Unique NameCX047054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047054 vs. ExPASy Swiss-Prot
Match: ATK1_ARATH (Kinesin-1 OS=Arabidopsis thaliana GN=ATK1 PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 5.071e-76
Identity = 148/253 (58.50%), Postives = 188/253 (74.31%), Query Frame = 3
Query:    3 DMASTEGSDCGTIEFTKEEVEALLNEKPKTKKFDLKAKIEQMTEHNKRFKLCIKWFQQVDENHVLEKQKIQSALESTEKKLSDTEMEMKNRESELNGTILDLRQENAHLREKVAKEESEKLDAIENHRIEKEARVAAEKLQASLSEQLEKAHQDIAAANQRAVSLDDMYKRLQEYNQSLQLYNAKLQSDLETANEVNKRVEKEKLTIVENLSTLRGHNNSLQEQLALSRASQDEATKQKDSLVNEVRCLRGEL 761
            D+ S E  +CG ++FTK+E+ ALL+E+ K  KFD KAKIEQMT+  KR K+C+KWFQQ DE HV EK+ ++ +LES+E+K +  E+E + +E EL  TI  L +    L EK+AKEES   DAIE HR EKEARVAAEK+QASL E+L+K  ++  AA Q+  SL+DMYKRLQEYN SLQ YN+KLQ+DLET      R EKEK +I+ENLSTLRGH+ SLQ+QL+ SR  QD+A KQKDSL++EV  LR EL
Sbjct:   56 DVGSIE--ECGKVDFTKDEILALLSERAKAGKFDTKAKIEQMTDIIKRLKVCVKWFQQADETHVQEKENLKVSLESSEQKYNHKELEARTKEEELQATISKLEENVVSLHEKLAKEESSTQDAIECHRREKEARVAAEKVQASLGEELDKVKEEKMAAKQKVTSLEDMYKRLQEYNTSLQQYNSKLQTDLETVRAALTRAEKEKSSILENLSTLRGHSKSLQDQLSSSRVLQDDAIKQKDSLLSEVTNLRNEL 306          
BLAST of CX047054 vs. ExPASy Swiss-Prot
Match: ATK3_ARATH (Kinesin-3 OS=Arabidopsis thaliana GN=ATK3 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.453e-64
Identity = 127/252 (50.40%), Postives = 183/252 (72.62%), Query Frame = 3
Query:    9 ASTEGSDCGTIEFTKEEVEALLNEKPKTK-KFDLKAKIEQMTEHNKRFKLCIKWFQQVDENHVLEKQKIQSALESTEKKLSDTEMEMKNRESELNGTILDLRQENAHLREKVAKEESEKLDAIENHRIEKEARVAAEKLQASLSEQLEKAHQDIAAANQRAVSLDDMYKRLQEYNQSLQLYNAKLQSDLETANEVNKRVEKEKLTIVENLSTLRGHNNSLQEQLALSRASQDEATKQKDSLVNEVRCLRGEL 761
            AST GS+ G +EFT+E+VE LLNE+ K K KF+ K + E M ++ KR +LCI+WFQ+++ ++  E++K+++ALE  EK   D E+ +KN+E ELN  I +LR+    ++ ++A+E++EKL A ++   EKEAR++ EK QA L+E+L KA  D+  ANQR  S++DMYK LQEYN SLQLYN+KLQ DL+ A+E  KR EKE+  I+EN+  L+G  ++LQEQLA S+ASQ++  KQK  LVNE+  L+ EL
Sbjct:   31 ASTTGSEYGPVEFTREDVETLLNERIKYKSKFNYKERCENMMDYIKRLRLCIRWFQELELDYAFEQEKLKNALELNEKHCVDMEVSLKNKEEELNMIIEELRKNFESVQVQLAREQTEKLAANDSLGKEKEARLSVEKAQAGLTEELGKAQGDLQTANQRIQSVNDMYKLLQEYNSSLQLYNSKLQGDLDEAHETIKRGEKERTAIIENIGNLKGQFSALQEQLAASKASQEDIMKQKGELVNEIASLKVEL 282          
BLAST of CX047054 vs. ExPASy Swiss-Prot
Match: ATK2_ARATH (Kinesin-2 OS=Arabidopsis thaliana GN=ATK2 PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 5.095e-60
Identity = 120/255 (47.06%), Postives = 183/255 (71.76%), Query Frame = 3
Query:    3 DMASTEGSDCG-TIEFTKEEVEALLNEKPKTK-KFDLKAKIEQMTEHNKRFKLCIKWFQQVDENHVLEKQKIQSALESTEKKLSDTEMEMKNRESELNGTILDLRQENAHLREKVAKEESEKLDAIENHRIEKEARVAAEKLQASLSEQLEKAHQDIAAANQRAVSLDDMYKRLQEYNQSLQLYNAKLQSDLETANEVNKRVEKEKLTIVENLSTLRGHNNSLQEQLALSRASQDEATKQKDSLVNEVRCLRGEL 761
            D+ S EGS+ G  +EFT+E+VE LL+E+ K K K++ K + E   ++ KR +LCI+WFQ+++ ++  E++K+++A+E  EK  +D E+ +K +E ELN  I +LR+  A ++ ++AKE++EKL A E+   E+EAR+A E LQA+++E+L K   ++  ANQR  +++DMYK LQEYN SLQLYN+KLQ DL+ A+E  KR EKE+  IVE++  L+G   +LQ+QLA S+ SQD+  KQKD LVNE+  L+ E+
Sbjct:   19 DLTSNEGSEYGGPVEFTREDVETLLHERIKYKSKYNYKERCENTMDYVKRLRLCIRWFQELELDYAFEQEKLKNAMEMNEKHCADLEVNLKVKEEELNMVIDELRKNFASVQVQLAKEQTEKLAANESLGKEREARIAVESLQAAITEELAKTQGELQTANQRIQAVNDMYKLLQEYNSSLQLYNSKLQGDLDEAHENIKRGEKERTGIVESIGNLKGQFKALQDQLAASKVSQDDVMKQKDELVNEIVSLKVEI 273          
The following BLAST results are available for this feature:
BLAST of CX047054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ATK1_ARATH5.071e-7658.50Kinesin-1 OS=Arabidopsis thaliana GN=ATK1 PE=2 SV=... [more]
ATK3_ARATH4.453e-6450.40Kinesin-3 OS=Arabidopsis thaliana GN=ATK3 PE=2 SV=... [more]
ATK2_ARATH5.095e-6047.06Kinesin-2 OS=Arabidopsis thaliana GN=ATK2 PE=2 SV=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS09_11H03_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11H03-P6-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047054 ID=CX047054; Name=CX047054; organism=Citrus sinensis; type=EST; length=761bp
GTGATATGGCAAGCACCGAGGGTTCAGATTGTGGGACTATTGAGTTTACA
AAAGAGGAAGTTGAGGCTTTGTTGAATGAGAAGCCGAAAACAAAAAAGTT
TGATCTTAAGGCAAAAATTGAGCAAATGACTGAGCATAACAAGAGGTTCA
AGCTTTGCATCAAATGGTTTCAGCAAGTTGATGAAAACCATGTTCTTGAG
AAGCAAAAGATTCAGAGTGCATTGGAGTCTACTGAGAAGAAATTATCTGA
TACTGAAATGGAGATGAAGAATAGGGAGAGTGAACTGAATGGAACTATTT
TAGACTTGAGGCAAGAAAATGCCCATTTGCGAGAGAAAGTTGCAAAAGAA
GAATCAGAAAAGCTGGATGCAATTGAAAATCATAGAATAGAAAAGGAAGC
TAGAGTTGCTGCTGAAAAGTTACAAGCTTCTCTCTCAGAACAGCTTGAAA
AAGCTCATCAAGACATTGCAGCTGCCAACCAGAGGGCTGTCTCTCTTGAC
GATATGTACAAACGGTTACAGGAGTATAATCAGAGTCTACAACTCTACAA
TGCTAAACTTCAATCTGATCTTGAAACAGCTAATGAGGTGAATAAACGTG
TAGAAAAGGAGAAGTTGACCATAGTCGAGAACCTAAGCACCTTAAGGGGT
CACAATAATTCGTTGCAGGAGCAATTAGCTTTGTCCAGAGCTTCACAGGA
TGAAGCTACTAAACAGAAAGATTCATTAGTTAATGAAGTCAGATGCCTTC
GCGGCGAATTG
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