CX046951

Overview
NameCX046951
Unique NameCX046951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig328 contig Csv1_Contig328:414..1231. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 1.076e-74
Identity = 119/178 (66.85%), Postives = 138/178 (77.53%), Query Frame = 3
Query:    3 GMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKP 536
            G AFQLY SGIFTG+CGT+LDHGV AVGYGTENG DYWIV+NSWG SWGE GY+RMERN+  + +GKCGIA+E SY                       VCDNYY+CP+S TCCC++EYG  C+AWGCCPLE ATCCDDHYSCCPH+YPICNV+ GTCLM+KD+PL V+AL+RT AKP
Sbjct:  268 GRAFQLYSSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKAS-SGKCGIAVEPSYPLKKGENPPNPGPTPPSPTPPPTVCDNYYTCPDSTTCCCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEYPICNVQQGTCLMAKDSPLAVKALKRTLAKP 444          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.649e-73
Identity = 116/185 (62.70%), Postives = 139/185 (75.14%), Query Frame = 3
Query:    3 GMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQ 557
            G AFQLY+SGIF G CGT LDHGV AVGYGTENG DYWIV+NSWG SWGE GY+RM RN+A + +GKCGIA+E SY                        CD+YY+CPESNTCCC+FEYG  CFAWGCCPLEAATCCDD+YSCCPH+YP+C++  GTCL+SK++P  V+AL+R PA P+W+ G +
Sbjct:  276 GRAFQLYDSGIFDGSCGTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMARNIASS-SGKCGIAIEPSYPIKNGENPPNPGPSPPSPIKPPTQCDSYYTCPESNTCCCLFEYGKYCFAWGCCPLEAATCCDDNYSCCPHEYPVCDLDQGTCLLSKNSPFSVKALKRKPATPFWSQGRK 459          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 7.232e-63
Identity = 104/186 (55.91%), Postives = 128/186 (68.82%), Query Frame = 3
Query:    3 GMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQG 560
            G  FQ Y+SGIFTG+CGT++DHGV   GYGTENG DYWIV+NSWG++  E GY+R++RNV+ + +G CG+A+E SY                        CD Y  C    TCCC+ ++  SCF+WGCCPLE ATCC+DHYSCCPHDYPICNVR GTC MSK NPLGV+A++R  A+P  A GN G
Sbjct:  157 GRDFQHYKSGIFTGKCGTAVDHGVVIAGYGTENGMDYWIVRNSWGANCRENGYLRVQRNVSSS-SGLCGLAIEPSYPVKTGPNPPKPAPSPPSPVKPPTECDEYSQCAVGTTCCCILQFRRSCFSWGCCPLEGATCCEDHYSCCPHDYPICNVRQGTCSMSKGNPLGVKAMKRILAQPIGAFGNGG 341          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 2.748e-62
Identity = 108/183 (59.02%), Postives = 124/183 (67.76%), Query Frame = 3
Query:    3 GMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXA------VCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAK 533
            G  FQLY SG+F+GRCGTSLDHGV AVGYGT+NG DYWIV+NSWG  WGE GY+RMERN+  T TGKCGIAM ASY                             VCD+ +SCP  +TCCC F + N C  WGCCP+E ATCC DH SCCP DYP+CN RAGTC  SK++PL V+AL+RT AK
Sbjct:  281 GREFQLYHSGVFSGRCGTSLDHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRMERNINVT-TGKCGIAMMASYPTKSGANPPKPSPTPPTPPTPPPPSAPDHVCDDNFSCPAGSTCCCAFGFRNLCLVWGCCPVEGATCCKDHASCCPPDYPVCNTRAGTCSASKNSPLSVKALKRTLAK 462          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 2.332e-53
Identity = 97/184 (52.72%), Postives = 112/184 (60.87%), Query Frame = 3
Query:    3 GMAFQLYESGIFTGRCGTSLDHGVTAVGYGTE--NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRA----LRRTPAKP 536
            G  FQLY+SG+FTGRCGT+LDHGV AVGYGT+   GA YW V+NSWG  WGE GYIRMERNV    TGKCGIAM ASY                        CD Y  CP   TCCC +   N C  WGCCP+E ATCC DH +CCP +YP+CN +A TC  SK++P  +R      R  P +P
Sbjct:  296 GREFQLYDSGVFTGRCGTNLDHGVVAVGYGTDAATGAAYWTVRNSWGPDWGENGYIRMERNVTAR-TGKCGIAMMASYPIKKGPNPKPSPPSPAPSPPQQ--CDRYSKCPAGTTCCCNYGIRNHCIVWGCCPVEGATCCKDHSTCCPKEYPVCNAKARTCSKSKNSPYNIRTPAAMARSVPEQP 476          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 5.231e-29
Identity = 56/76 (73.68%), Postives = 64/76 (84.21%), Query Frame = 3
Query:    3 GMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            G  FQ Y+SGIFTG CGT+LDH V AVGYG+ENG DYWIV+NSWG  WGE GYIRMERN+A + +GKCGIA+EASY
Sbjct:  284 GRIFQHYQSGIFTGSCGTNLDHAVVAVGYGSENGVDYWIVRNSWGPRWGEEGYIRMERNLAASKSGKCGIAVEASY 359          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.231e-29
Identity = 57/76 (75.00%), Postives = 67/76 (88.16%), Query Frame = 3
Query:    3 GMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            G AFQ Y+SGIFTG+CGT++DH V AVGYG+ENG DYWIV+NSWG+ WGE GYIRMERNVA + +GKCGIA+EASY
Sbjct:  239 GRAFQHYQSGIFTGKCGTNMDHAVVAVGYGSENGVDYWIVRNSWGTRWGEDGYIRMERNVA-SKSGKCGIAIEASY 313          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.817e-25
Identity = 52/77 (67.53%), Postives = 57/77 (74.03%), Query Frame = 3
Query:    3 GMAFQLYESGIFTGRCGTSLDHGVTAVGYG-TENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            G  FQ Y  G+FTGRCGT LDHGV  VGYG T +G  YWIVKNSWG  WGE GYIRM+R ++    GKCGIAMEASY
Sbjct:  268 GYGFQFYSEGVFTGRCGTELDHGVAIVGYGATRDGTKYWIVKNSWGEEWGESGYIRMQRGISDK-RGKCGIAMEASY 343          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.741e-24
Identity = 51/73 (69.86%), Postives = 58/73 (79.45%), Query Frame = 3
Query:   12 FQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            FQLYESG+F G CGT+L+HGV  VGYGTENG DYWIVKNS G +WGE GY++M RN+A    G CGIAM ASY
Sbjct:  286 FQLYESGVFDGTCGTNLNHGVVVVGYGTENGRDYWIVKNSRGDTWGEAGYMKMARNIANP-RGLCGIAMRASY 357          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.067e-24
Identity = 50/73 (68.49%), Postives = 58/73 (79.45%), Query Frame = 3
Query:   12 FQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            FQLYESG+F G CGT+L+HGV  VGYGTENG DYW+VKNS G +WGE GY++M RN+A    G CGIAM ASY
Sbjct:  279 FQLYESGVFDGSCGTNLNHGVVVVGYGTENGRDYWLVKNSRGITWGEAGYMKMARNIANP-RGLCGIAMRASY 350          
The following BLAST results are available for this feature:
BLAST of CX046951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
ORYA_ORYSJ1.076e-7466.85Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
RD21A_ARATH2.649e-7362.70Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CYSPL_SOLLC7.232e-6355.91Low-temperature-induced cysteine proteinase (Fragm... [more]
ORYB_ORYSJ2.748e-6259.02Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CYSP1_ORYSJ2.332e-5352.72Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
GCP1_ARATH5.231e-2973.68Germination-specific cysteine protease 1 OS=Arabid... [more]
CYSP4_BRANA5.231e-2975.00Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
CYSP_HEMSP7.817e-2567.53Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CPR4_ARATH1.741e-2469.86Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CPR3_ARATH5.067e-2468.49Probable cysteine proteinase At4g11310 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11B12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11B12-D24-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046951 ID=CX046951; Name=CX046951; organism=Citrus sinensis; type=EST; length=818bp
GTGGCATGGCATTCCAGTTATATGAATCGGGTATATTTACGGGAAGATGT
GGGACATCTCTGGACCATGGTGTTACTGCTGTTGGATATGGCACAGAAAA
TGGAGCTGATTACTGGATTGTGAAGAATTCATGGGGCAGTAGCTGGGGAG
AGGGTGGCTATATTAGGATGGAGCGTAACGTGGCTGGCACTCTCACGGGC
AAGTGTGGAATTGCCATGGAGGCCTCATATCCCATAAAGAAAGGCCAAAA
TCCTCCCAACCCCGGACCGTCTCCTCCATCTCCAACAAAGCCTCCTGCTG
TGTGTGACAATTATTACTCTTGCCCTGAGAGCAACACTTGCTGCTGTGTC
TTTGAGTATGGTAACTCTTGCTTTGCATGGGGATGCTGCCCGCTTGAGGC
TGCCACCTGCTGTGATGACCACTATAGCTGCTGCCCACATGACTATCCCA
TCTGTAATGTTCGTGCTGGGACCTGCTTGATGAGCAAGGACAACCCATTG
GGAGTGAGGGCATTGCGACGCACCCCTGCTAAACCTTACTGGGCTCATGG
AAATCAAGGTGGAAGTAGCAGTGCTTAATTATAGTTGGCACTGTAAGAGC
AGTGGAAGGCCGAAGGGAGGATGAAGATATTCGTGCTTGTGAATGAGTTT
CTCCCCGGCCTTAGTTCATTTTACTGCATTTCATTTCAAACGTTAATGTA
CCGGCAGGTGGATGGTCTGTTAAATATTTATTCGGACGTTGGTTTTGTAT
ATAGCGTTGTAAGTTATCTATCTGCGTTGAATCCGAACAATGCACAAACA
AATTGGTGTTATCTATTT
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