CX046945

Overview
NameCX046945
Unique NameCX046945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_BETVU (Elongation factor 2 OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 444.506 bits (1142), Expect = 3.298e-124
Identity = 224/236 (94.92%), Postives = 231/236 (97.88%), Query Frame = 3 
Query:  111 MVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVD 818
            MVKFTA+ELR IMD KHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR DEAERGITIKSTGISLYY+MTD AL+S+KGER+GN+YLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAY TFQKVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTL+NFAKMYASKFGVD
Sbjct:    1 MVKFTADELRAIMDCKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYQMTDEALQSYKGERKGNDYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYTTFQKVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLSNFAKMYASKFGVD 236
[Close]
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_CHLKE (Elongation factor 2 OS=Chlorella kessleri PE=2 SV=1)

HSP 1 Score: 384.415 bits (986), Expect = 4.050e-106
Identity = 191/236 (80.93%), Postives = 212/236 (89.83%), Query Frame = 3 
Query:  111 MVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVD 818
            MVKFT +++R +M++++NIRNMSVIAHVDHGKSTLTDSLVAAAGIIA E AGD R+TDTR DE ERGITIKSTGISLYY+MTD  LK F GERQGN++LINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLT+NK+DRCFLEL +D EEAY  +++VIENANVIMATY D  LGD Q +PE GTV+FSAGLHGWAFTLT FA MYA+KFG D
Sbjct:    1 MVKFTIDQIRGLMEYQNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAFEQAGDQRLTDTRADEQERGITIKSTGISLYYQMTDEQLKGFTGERQGNDFLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTINKIDRCFLELMLDPEEAYLAYRRVIENANVIMATYADEHLGDTQTHPEAGTVSFSAGLHGWAFTLTVFANMYAAKFGTD 236
[Close]
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_YEAST (Elongation factor 2 OS=Saccharomyces cerevisiae GN=EFT1 PE=1 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 2.157e-91
Identity = 166/236 (70.34%), Postives = 193/236 (81.78%), Query Frame = 3 
Query:  111 MVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVD 818
            MV FT +++R +MD   N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R TDTR+DE ERGITIKST ISLY EM+D  +K  K +  GN +LINLIDSPGHVDFSSEVTAALR+TDGALVVVD IEGVCVQTETVLRQALGERI+PV+ +NK+DR  LELQV  E+ YQTF + +E+ NVI++TY D +LGDVQVYP +GTVAF +GLHGWAFT+  FA  YA KFGVD
Sbjct:    1 MVAFTVDQMRSLMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMSDEDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIKPVVVINKVDRALLELQVSKEDLYQTFARTVESVNVIVSTYADEVLGDVQVYPARGTVAFGSGLHGWAFTIRQFATRYAKKFGVD 236
[Close]
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_CANAL (Elongation factor 2 OS=Candida albicans GN=EFT2 PE=1 SV=2)

HSP 1 Score: 333.954 bits (855), Expect = 6.277e-91
Identity = 164/236 (69.49%), Postives = 193/236 (81.78%), Query Frame = 3 
Query:  111 MVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVD 818
            MV FT E++R +MD   N+RNMSVIAHVDHGKSTL+DSLV  AGII+   AGD R  DTR+DE ERGITIKST ISLY  MTD  +K  K +  GN +L+NLIDSPGHVDFSSEVTAALR+TDGALVVVD +EGVCVQTETVLRQALGERI+PV+ +NK+DR  LELQ   E+ YQTF + +E+ NVI++TY DP+LGDVQVYP+KGTVAF++GLHGWAFT+  FA  Y+ KFGVD
Sbjct:    1 MVAFTIEQIRGLMDKVTNVRNMSVIAHVDHGKSTLSDSLVQKAGIISAAKAGDARFMDTRKDEQERGITIKSTAISLYASMTDEDVKDIKQKTDGNSFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVDTVEGVCVQTETVLRQALGERIKPVVVINKVDRALLELQTTKEDLYQTFARTVESVNVIISTYCDPVLGDVQVYPQKGTVAFASGLHGWAFTVRQFANKYSKKFGVD 236
[Close]
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_PICPA (Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=3 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 8.198e-91
Identity = 163/236 (69.07%), Postives = 193/236 (81.78%), Query Frame = 3 
Query:  111 MVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVD 818
            MV FT +++R +MD   N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R TDTR+DE ERGITIKST ISLY EM D  +K  K + +GN +LINLIDSPGHVDFSSEVTAALR+TDGALVVVDC+EGVCVQTETVLRQALGERI+PV+ +NK+DR  LELQV  E+ YQ+F + +E+ NV++ATY D  +GD QVYPE+GTVAF +GLHGWAFT+  FA  Y+ KFGVD
Sbjct:    1 MVNFTVDQMRSLMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMGDDDVKEIKQKTEGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETVLRQALGERIKPVVVINKVDRALLELQVTKEDLYQSFARTVESVNVVIATYTDKTIGDNQVYPEQGTVAFGSGLHGWAFTVRQFATRYSKKFGVD 236
[Close]
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_SACKL (Elongation factor 2 OS=Saccharomyces kluyveri GN=EFT2 PE=3 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.071e-90
Identity = 164/236 (69.49%), Postives = 194/236 (82.20%), Query Frame = 3 
Query:  111 MVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVD 818
            MV FT +++R +MD   NIRNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R TDTR+DE ERGITIKST ISL+ EM+D  +K  K + +GN +LINLIDSPGHVDFSSEVTAALR+TDGALVVVD +EGVCVQTETVLRQALGERI+PV+ VNK+DR  LELQV  E+ YQ+F + +E+ NVI++TY D +LGDVQVYP KGT+AF +GLHGWAFT+  FA  Y+ KFGVD
Sbjct:    1 MVAFTVDQIRSLMDKVTNIRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLFSEMSDDDVKDIKQKTEGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTVEGVCVQTETVLRQALGERIKPVVCVNKVDRALLELQVSKEDLYQSFARTVESVNVIISTYADEVLGDVQVYPSKGTIAFGSGLHGWAFTIRQFANRYSKKFGVD 236
[Close]
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_ASHGO (Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.071e-90
Identity = 162/236 (68.64%), Postives = 195/236 (82.63%), Query Frame = 3 
Query:  111 MVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVD 818
            MV FT +++R +MD   N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R TDTR+DE ERGITIKST ISL+ EM++  +K  K + +GN +LINLIDSPGHVDFSSEVTAALR+TDGALVVVD +EGVCVQTETVLRQALGERI+PV+ +NK+DR  LELQV  E+ YQ+F + +E+ NVI++TY D +LGDVQVYP+KGTVAF +GLHGWAFT+  FA  Y+ KFGVD
Sbjct:    1 MVAFTVDQIRSLMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLFSEMSEEDVKDIKQKTEGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTVEGVCVQTETVLRQALGERIKPVVVINKVDRALLELQVSKEDLYQSFSRTVESVNVIISTYADEVLGDVQVYPQKGTVAFGSGLHGWAFTIRQFANRYSKKFGVD 236
[Close]
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_PICGU (Elongation factor 2 OS=Pichia guilliermondii GN=EFT2 PE=3 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 2.385e-90
Identity = 166/236 (70.34%), Postives = 190/236 (80.51%), Query Frame = 3 
Query:  111 MVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVD 818
            MV FT E++R +MD   N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R  DTR+DE ERGITIKST ISLY  M D  +K  K +  GN +LINLIDSPGHVDFSSEVTAALR+TDGALVVVD +EGVCVQTETVLRQALGERI+PVL VNK+DR  LELQV  E+ YQTF + +E+ NVI++TY DP LGD QVYP+KGTVAF +GLHGWAFT+  FA  Y+ KFGVD
Sbjct:    1 MVAFTIEQIRDLMDKVANVRNMSVIAHVDHGKSTLTDSLVQRAGIISAGKAGEARFMDTRKDEQERGITIKSTAISLYASMDDDDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTVEGVCVQTETVLRQALGERIKPVLVVNKVDRALLELQVSKEDLYQTFARTVESVNVIISTYVDPALGDAQVYPDKGTVAFGSGLHGWAFTVRQFALRYSKKFGVD 236
[Close]
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_DEBHA (Elongation factor 2 OS=Debaryomyces hansenii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 3.115e-90
Identity = 165/236 (69.92%), Postives = 191/236 (80.93%), Query Frame = 3 
Query:  111 MVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVD 818
            MV FT E++R +MD   N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R TDTR+DE ERGITIKST ISLY  MTD   K  + +  GN +LINLIDSPGHVDFSSEVTAALR+TDGALVVVDC+EGVCVQTETVLRQALGERI+PV+ +NK+DR  LELQV  E+ YQ+F + IE+ NVI++TY D  LGD QVYP+KGTVAF +GLHGWAFT+  FA  Y+ KFGVD
Sbjct:    1 MVAFTIEQIRELMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYASMTDDDCKEIQQKTVGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETVLRQALGERIKPVVIINKVDRALLELQVTKEDLYQSFSRTIESVNVIISTYVDSSLGDSQVYPDKGTVAFGSGLHGWAFTVRQFATRYSKKFGVD 236
[Close]
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_SACCA (Elongation factor 2 OS=Saccharomyces castellii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 4.069e-90
Identity = 163/236 (69.07%), Postives = 191/236 (80.93%), Query Frame = 3 
Query:  111 MVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVD 818
            MV FT +++R +MD   N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R  DTR+DE ERGITIKST ISLY EM D  +K      +GN +LINLIDSPGHVDFSSEVTAALR+TDGALVVVD +EGVCVQTETVLRQALGERI+PV+ +NK+DR  LELQV  E+ YQ+F + +E+ NVI++TY D +LGDVQVYP KGTVAF +GLHGWAFT+  FA+ YA KFGVD
Sbjct:    1 MVAFTVDQMRSLMDTVTNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGEARFMDTRKDEQERGITIKSTAISLYSEMPDEDVKDIAQNTEGNAFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTVEGVCVQTETVLRQALGERIKPVVCINKVDRALLELQVSKEDLYQSFSRTVESVNVIISTYADEILGDVQVYPSKGTVAFGSGLHGWAFTIRQFAQRYAKKFGVD 236
The following BLAST results are available for this feature:
BLAST of CX046945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF2_BETVU3.298e-12494.92Elongation factor 2 OS=Beta vulgaris PE=2 SV=1[more]
EF2_CHLKE4.050e-10680.93Elongation factor 2 OS=Chlorella kessleri PE=2 SV=... [more]
EF2_YEAST2.157e-9170.34Elongation factor 2 OS=Saccharomyces cerevisiae GN... [more]
EF2_CANAL6.277e-9169.49Elongation factor 2 OS=Candida albicans GN=EFT2 PE... [more]
EF2_PICPA8.198e-9169.07Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=... [more]
EF2_SACKL1.071e-9069.49Elongation factor 2 OS=Saccharomyces kluyveri GN=E... [more]
EF2_ASHGO1.071e-9068.64Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=... [more]
EF2_PICGU2.385e-9070.34Elongation factor 2 OS=Pichia guilliermondii GN=EF... [more]
EF2_DEBHA3.115e-9069.92Elongation factor 2 OS=Debaryomyces hansenii GN=EF... [more]
EF2_SACCA4.069e-9069.07Elongation factor 2 OS=Saccharomyces castellii GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11B09_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11B09-D18-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046945 ID=CX046945; Name=CX046945; organism=Citrus sinensis; type=EST; length=818bp
GTTCACTCCTTTCTCTCTATTTTTACGGATTGAGACATTTGCAGTCTCTC
TCGCTCGCCGCCTTCGAAAGAAATACTGTTGTTGTTGGTAATATTTGAGA
ATCAGTCAAGATGGTGAAGTTCACAGCAGAAGAGCTCCGGCGTATTATGG
ACTTCAAACATAACATCCGCAATATGTCTGTTATTGCCCATGTTGATCAT
GGGAAGTCAACCCTTACCGACTCTCTTGTGGCTGCTGCTGGTATTATCGC
CCAAGAAGTTGCTGGCGATGTCCGTATGACAGATACTCGTCAGGATGAAG
CTGAGCGTGGTATTACAATCAAGTCTACTGGTATATCTCTCTACTACGAG
ATGACTGATGCGGCTTTGAAGAGCTTCAAGGGAGAGCGTCAAGGGAATGA
ATACCTCATCAACCTTATTGATTCCCCTGGGCACGTCGATTTCTCATCTG
AGGTTACAGCTGCCCTTCGTATCACTGATGGTGCACTTGTGGTCGTAGAC
TGCATTGAAGGTGTTTGTGTCCAAACAGAAACTGTGCTTAGACAAGCCCT
GGGTGAAAGGATTAGGCCAGTCTTGACTGTGAACAAGATGGACAGGTGCT
TCCTTGAGCTTCAGGTTGACGGTGAAGAGGCTTACCAGACTTTCCAGAAA
GTGATTGAGAATGCTAATGTCATTATGGCTACCTATGAAGATCCACTCCT
TGGCGATGTTCAGGTTTACCCTGAAAAGGGAACAGTTGCTTTCTCTGCTG
GTTTGCATGGTTGGGCTTTTACCTTGACAAATTTTGCTAAGATGTATGCA
TCCAAGTTCGGAGTTGAT
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