CX046940

Overview
NameCX046940
Unique NameCX046940
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig765 contig Csv1_Contig765:753..1526. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX046940 vs. ExPASy Swiss-Prot
Match: OST48_XENTR (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Xenopus tropicalis GN=ddost PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.321e-55
Identity = 103/208 (49.52%), Postives = 143/208 (68.75%), Query Frame = -3
Query:  152 VSVVQARNNARILITGSLSMFSNRFFRSGVQKA-GSSIKHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYFAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFFMMAGFFIFTIVHLYSK 772
            ++ +QARNNAR++ +GS+  FS+ FF S VQKA G S ++ K+GN +    +S+WVF E G L+   V HH+VGES  P+ Y + D +EYS+ I + S   W P+  DD+Q++F  + P+V +T      G Y  +FK+PDVYGVFQFKV+Y RLGYT L  + Q+ VRP +H +YERF+P+AYPYY SAF +M G FIF+IV L+ K
Sbjct:  225 IAGLQARNNARVVFSGSMDFFSDAFFNSAVQKAAGGSNRYAKTGNYELAVALSRWVFKEEGVLRVGQVSHHRVGESSPPSAYTVTDLVEYSIVIEQLSNGKWVPFDGDDIQLEFVRIDPFV-RTFLKKNGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLYSTTQVSVRPLQHTQYERFIPSAYPYYASAFSVMFGLFIFSIVFLHMK 431          
BLAST of CX046940 vs. ExPASy Swiss-Prot
Match: OST48_DANRE (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Danio rerio GN=ddost PE=2 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 1.725e-55
Identity = 103/208 (49.52%), Postives = 143/208 (68.75%), Query Frame = -3
Query:  152 VSVVQARNNARILITGSLSMFSNRFFRSGVQKAGSSIK-HEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYFAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFFMMAGFFIFTIVHLYSK 772
            ++ +QARNNAR++ +GSL  FS+ FF S VQKA +  K +E++GN+     +S+WVF E G L+  +V HH VGES  PA Y + D +EY + I   SG  W P+  DD+Q++F  + P+V +T      G Y  +FK+PDVYGVFQFKV+Y RLGYT L  S Q+ VRP +H +YERF+P+A+PYY SAF MMAG F+F++V L+ +
Sbjct:  229 IAGLQARNNARVVFSGSLHFFSDAFFNSAVQKAATGSKRYEQTGNQDLAEALSRWVFKEAGVLRVGDVTHHPVGESTPPAAYTVTDLVEYGIVIEMLSGGKWVPFDGDDIQLEFVRIDPFV-RTYLKKNGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAFPYYASAFSMMAGLFVFSVVFLHMR 435          
BLAST of CX046940 vs. ExPASy Swiss-Prot
Match: OST48_XENLA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Xenopus laevis GN=ddost PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.253e-55
Identity = 105/208 (50.48%), Postives = 143/208 (68.75%), Query Frame = -3
Query:  152 VSVVQARNNARILITGSLSMFSNRFFRSGVQKAGS-SIKHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYFAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFFMMAGFFIFTIVHLYSK 772
            ++ +QARNNAR++ +GSL  FS+ FF S VQKA S S ++ K+GN +    +S+WVF E G L+   V HH+VGES  P+ Y + D +EYS+ I + S   W P+  DD+Q++F  + P+V +T      G Y  +FK+PDVYGVFQFKV+Y RLGYT L  + QI VRP +H +YERF+P+AYPYY SAF +M G FIF+IV L+ K
Sbjct:  226 IAGLQARNNARVVFSGSLDFFSDSFFNSAVQKAASGSNRYAKTGNYELAMALSRWVFKEEGVLRVGEVSHHRVGESSPPSAYTVTDLVEYSIVIEKLSDGKWVPFDGDDIQLEFVRIDPFV-RTFLKKNGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLYSTTQISVRPLQHTQYERFIPSAYPYYASAFSVMFGLFIFSIVFLHMK 432          
BLAST of CX046940 vs. ExPASy Swiss-Prot
Match: OST48_PONAB (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Pongo abelii GN=DDOST PE=2 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 6.556e-55
Identity = 103/208 (49.52%), Postives = 142/208 (68.27%), Query Frame = -3
Query:  152 VSVVQARNNARILITGSLSMFSNRFFRSGVQKAG-SSIKHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYFAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFFMMAGFFIFTIVHLYSK 772
            ++ +QARNNAR++ +GSL  FS+ FF S VQKA   S ++ ++GN +    +S+WVF E G L+   V HH+VGE+  P  Y + D +EYS+ I + S   W P+  DD+Q++F  + P+V +T    + G Y  +FK+PDVYGVFQFKV+Y RLGYT L  S Q+ VRP +H +YERF+P+AYPYY SAF MM G FIF+IV L+ K
Sbjct:  227 IAGLQARNNARVIFSGSLDFFSDSFFNSAVQKAAPGSQRYSQTGNYELAVALSRWVFKEEGVLRVGPVSHHRVGETAPPNAYTVTDLVEYSIVIQQLSNGKWVPFDGDDIQLEFVRIDPFV-RTFLKKKGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMLGLFIFSIVFLHMK 433          
BLAST of CX046940 vs. ExPASy Swiss-Prot
Match: OST48_HUMAN (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Homo sapiens GN=DDOST PE=1 SV=4)

HSP 1 Score: 214.157 bits (544), Expect = 6.556e-55
Identity = 103/208 (49.52%), Postives = 142/208 (68.27%), Query Frame = -3
Query:  152 VSVVQARNNARILITGSLSMFSNRFFRSGVQKAG-SSIKHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYFAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFFMMAGFFIFTIVHLYSK 772
            ++ +QARNNAR++ +GSL  FS+ FF S VQKA   S ++ ++GN +    +S+WVF E G L+   V HH+VGE+  P  Y + D +EYS+ I + S   W P+  DD+Q++F  + P+V +T    + G Y  +FK+PDVYGVFQFKV+Y RLGYT L  S Q+ VRP +H +YERF+P+AYPYY SAF MM G FIF+IV L+ K
Sbjct:  244 IAGLQARNNARVIFSGSLDFFSDSFFNSAVQKAAPGSQRYSQTGNYELAVALSRWVFKEEGVLRVGPVSHHRVGETAPPNAYTVTDLVEYSIVIQQLSNGKWVPFDGDDIQLEFVRIDPFV-RTFLKKKGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMLGLFIFSIVFLHMK 450          
BLAST of CX046940 vs. ExPASy Swiss-Prot
Match: OST48_RAT (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus GN=Ddost PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.461e-54
Identity = 101/208 (48.56%), Postives = 142/208 (68.27%), Query Frame = -3
Query:  152 VSVVQARNNARILITGSLSMFSNRFFRSGVQKAGSSI-KHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYFAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFFMMAGFFIFTIVHLYSK 772
            ++ +QARNNAR++ +GSL  FS+ FF S VQKA     ++ ++GN +    +S+WVF E G L+   V HH+VGE+  P  Y + D +EYS+ I + S   W P+  DD+Q++F  + P+V +T    + G Y  +FK+PDVYGVFQFKV+Y RLGYT L  S Q+ VRP +H +YERF+P+AYPYY SAF MMAG F+F++V L+ K
Sbjct:  229 IAGLQARNNARVIFSGSLDFFSDAFFNSAVQKAAPGAQRYSQTGNYELAVALSRWVFKEEGVLRVGPVSHHRVGETAPPNAYTVTDLVEYSIVIEQLSNGKWVPFDGDDIQLEFVRIDPFV-RTFLKRKGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMAGLFLFSVVFLHMK 435          
BLAST of CX046940 vs. ExPASy Swiss-Prot
Match: OST48_MOUSE (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Mus musculus GN=Ddost PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.908e-54
Identity = 103/208 (49.52%), Postives = 141/208 (67.79%), Query Frame = -3
Query:  152 VSVVQARNNARILITGSLSMFSNRFFRSGVQKAGSSI-KHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYFAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFFMMAGFFIFTIVHLYSK 772
            ++ +QARNNAR++ +GSL  FS+ FF S VQKA     ++ ++GN +    +S+WVF E G L+   V HH+VGE   P  Y + D +EYS+ I + S   W P+  DD+Q++F  + P+V +T    + G Y  +FK+PDVYGVFQFKV+Y RLGYT L  S Q+ VRP +H +YERF+P+AYPYY SAF MMAG FIF+IV L+ K
Sbjct:  229 IAGLQARNNARVIFSGSLDFFSDAFFNSAVQKATPGAQRYSQTGNYELAVALSRWVFKEEGVLRVGPVSHHRVGEMAPPNAYTVTDLVEYSIVIEQLSNGKWVPFDGDDIQLEFVRIDPFV-RTFLKRKGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMAGLFIFSIVFLHMK 435          
BLAST of CX046940 vs. ExPASy Swiss-Prot
Match: OST48_BOVIN (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Bos taurus GN=DDOST PE=2 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 1.908e-54
Identity = 102/208 (49.04%), Postives = 142/208 (68.27%), Query Frame = -3
Query:  152 VSVVQARNNARILITGSLSMFSNRFFRSGVQKAG-SSIKHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYFAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFFMMAGFFIFTIVHLYSK 772
            ++ +QARNNAR++ +GSL  FS+ FF S VQKA   S ++ ++GN +    +S+WVF E G L+   V HH+VGE+  P  Y + D +EYS+ I + S   W P+  DD+Q++F  + P+V +T    + G Y  +FK+PDVYGVFQFKV+Y RLGYT L  S Q+ VRP +H +YERF+P+AYPYY SAF MM G FIF++V L+ K
Sbjct:  227 IAGLQARNNARVIFSGSLDFFSDAFFNSAVQKAAPGSQRYSQTGNYELAVALSRWVFKEEGVLRVGPVSHHRVGETAPPNAYTVTDLVEYSIVIEQLSDGKWVPFDGDDIQLEFVRIDPFV-RTFLKRKGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMLGLFIFSVVFLHMK 433          
BLAST of CX046940 vs. ExPASy Swiss-Prot
Match: OST48_CANFA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Canis familiaris GN=DDOST PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.250e-54
Identity = 102/208 (49.04%), Postives = 141/208 (67.79%), Query Frame = -3
Query:  152 VSVVQARNNARILITGSLSMFSNRFFRSGVQKAG-SSIKHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYFAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFFMMAGFFIFTIVHLYSK 772
            ++ +QARNNAR++ +GSL  FS+ FF S VQKA   S ++ ++GN +    +S+WVF E G L+   V HH+VGE+  P  Y + D +EYS+ I + S   W P+  DD+Q++F  + P+V +T    + G Y  +FK+PDVYGVFQFKV+Y RLGYT L  S Q+ VRP +H +YERF+P+AYPYY SAF MM G FIF+ V L+ K
Sbjct:  233 IAGLQARNNARVVFSGSLDFFSDAFFNSAVQKAAPGSQRYSQTGNYELAVALSRWVFKEEGVLRVGPVSHHRVGETAPPNAYTVTDLVEYSIVIEQLSNGRWVPFDGDDIQLEFVRIDPFV-RTFLKKKGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLHSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMLGLFIFSTVFLHMK 439          
BLAST of CX046940 vs. ExPASy Swiss-Prot
Match: OST48_PIG (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Sus scrofa GN=DDOST PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.236e-53
Identity = 102/208 (49.04%), Postives = 140/208 (67.31%), Query Frame = -3
Query:  152 VSVVQARNNARILITGSLSMFSNRFFRSGVQKAG-SSIKHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYFAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFFMMAGFFIFTIVHLYSK 772
            ++ +QARNNAR++ +GSL  FS+ FF S VQKA   S ++ ++GN +    +S+WVF E G L+   V HH+VGE   P  Y + D +EYS+ I + S   W P+  DD+Q++F  + P+V +T    + G Y  +FK PDVYGVFQFKV+Y RLGYT L  S Q+ VRP +H +YERF+P+AYPYY SAF MM G FIF++V L+ K
Sbjct:  227 IAGLQARNNARVIFSGSLDFFSDAFFNSAVQKATPGSQRYPQTGNYELAVALSRWVFKEEGVLRVGPVSHHRVGEKAPPNAYTVTDLVEYSIVIEQLSEGRWVPFDGDDIQLEFVRIDPFV-RTFLKRKGGKYSVQFKFPDVYGVFQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMMVGLFIFSVVFLHMK 433          
The following BLAST results are available for this feature:
BLAST of CX046940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
OST48_XENTR1.321e-5549.52Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_DANRE1.725e-5549.52Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_XENLA2.253e-5550.48Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_PONAB6.556e-5549.52Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_HUMAN6.556e-5549.52Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_RAT1.461e-5448.56Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_MOUSE1.908e-5449.52Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_BOVIN1.908e-5449.04Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_CANFA4.250e-5449.04Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_PIG1.236e-5349.04Dolichyl-diphosphooligosaccharide--protein glycosy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11B07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11B07-D14-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046940 ID=CX046940; Name=CX046940; organism=Citrus sinensis; type=EST; length=774bp
TTTTTTTTTTTTTTTTTGCCTGAAAAATTATAATTGGACAACTTGAAAAC
AAGTTGTTAACATGATAAATATTCTTCTCATGGCATAATAAAAAATATCT
AATCCTGCTCCGAACACTATGGTTTCTCTCAGCATCGAAAGTAAAAATCT
ACTTGCTGTAAAGGTGAACGATGGTGAAAATAAAAAAACCAGCCATCATA
AAAAATGCTGATCCATAATATGGGTAAGCTGCTGGTAAAAATCTTTCGTA
TTCATTGTGTCTGTAGGGCCTGACTGGAATCTGTTTTGATAGGGATAAGC
TGGTGTATCCTAGTCTTTGGTACTCGACCTTGAATTGGAAGACTCCATAA
ACATCTGGAACCTTGAATTCAGCAAAATAGTGACCCTTCTGGTCAGTTGA
TAAGGTTTTCAAAACATAGGGGCTCATCATGTAAAACTGCACTTGAACAT
CATCTGAAACATATGGTTCCCAGCTTGTTCCAGACCACTCATAAATCTCA
ACCGAGTATTCCAAGTCATCATTGATCCTGTAAATTGCAGGTTCATCTGA
TTCTCCAACTTTGTGGTGTCTCACATTCACAGCCTTAAGATGACCTCTTT
CATGGAAAACCCATTTGCTAATTTCTGTCAAAAACTGCTCATTACCTGAT
TTCTCATGTTTAATTGAGCTCCCAGCCTTTTGCACTCCAGATCTGAAGAA
TCGATTGCTGAACATGCTCAATGAGCCAGTGATCAAAATCCGAGCATTAT
TTCTTGCCTGCACAACTGAAACTA
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