CX046895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046895 vs. ExPASy Swiss-Prot
Match: DPOLL_MACFA (DNA polymerase lambda OS=Macaca fascicularis GN=POLL PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.242e-29 Identity = 73/216 (33.80%), Postives = 118/216 (54.63%), Query Frame = 1 Query: 1 TLDDLKNEDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKGFLSKYVKKLKEMKFLREDLIFSTHSEE-----------------------VYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 579 +L+D++++ SLT Q +GLK+++D R+PR E ++E+ +QKA + ++ + GSYRRGKA+CGD+DV+I HPD +SH+G S+ + L++ FL +DL+ + + V P +A L+ +TG+ NR +R LA++KG L + L A + + L TEK+VF LG P+ EP ER+ Sbjct: 359 SLEDIRSQASLTTQQAIGLKHYNDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQQGFLTDDLVSQEENGQQQKYLGVCRLPGPGWRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKMGPGRVLPTPTEKDVFRLLGLPYREPAERD 574
BLAST of CX046895 vs. ExPASy Swiss-Prot
Match: DPOLL_HUMAN (DNA polymerase lambda OS=Homo sapiens GN=POLL PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.242e-29 Identity = 74/216 (34.26%), Postives = 117/216 (54.17%), Query Frame = 1 Query: 1 TLDDLKNEDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKGFLSKYVKKLKEMKFLREDLIFSTHSEE-----------------------VYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 579 +L+D++++ SLT Q +GLK++ D R+PR E ++E+ +QKA + ++ + GSYRRGKA+CGD+DV+I HPD +SH+G S+ + L++ FL +DL+ + + V P +A L+ +TG+ NR +R LA++KG L + L A + V L TEK+VF LG P+ EP ER+ Sbjct: 359 SLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERD 574
BLAST of CX046895 vs. ExPASy Swiss-Prot
Match: DPOLL_RAT (DNA polymerase lambda OS=Rattus norvegicus GN=Poll PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.612e-29 Identity = 72/216 (33.33%), Postives = 116/216 (53.70%), Query Frame = 1 Query: 1 TLDDLKNEDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKGFLSKYVKKLKEMKFLREDLIFSTHSEE-----------------------VYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 579 +L+D++ SLT Q +GLK++DD R+PR E ++E++++ + + P ++ + GS+RRGK +CGD+DV+I HPD +SH+G S + L++ FL +DL+ + + V P +A L+ +TG+ NR +R LA++KG L + L A + V A L TEK+VF LG P+ EP ER+ Sbjct: 357 SLEDIRGLASLTAQQAIGLKHYDDFLDRMPREEAAEIEQMVRVSAQAFNPGLLCVACGSFRRGKVTCGDVDVLITHPDGRSHQGIFSPLLDSLRQQGFLTDDLVSQEENGQQQKYLGVCRLPGAGQRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSAAVVRNSQGVKVGAGQVLPTPTEKDVFKLLGLPYREPAERD 572
BLAST of CX046895 vs. ExPASy Swiss-Prot
Match: DPOLL_MOUSE (DNA polymerase lambda OS=Mus musculus GN=Poll PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.994e-28 Identity = 73/215 (33.95%), Postives = 114/215 (53.02%), Query Frame = 1 Query: 4 LDDLKNEDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKGFLSKYVKKLKEMKFLREDLIFSTHSEE-----------------------VYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 579 L+DL++ SLT Q +GLK++DD R+PR E ++E+ ++ + + P ++ + GSYRRGK +CGD+DV+I HPD +SH+G S + L++ FL +DL+ + + V P +A L+ +TG+ NR +R LA++KG L + L A + V L TEK+VF LG P+ EP ER+ Sbjct: 358 LEDLQSLGSLTAQQAIGLKHYDDFLDRMPREEAAEIEQTVRISAQAFNPGLLCVACGSYRRGKMTCGDVDVLITHPDGRSHRGIFSCLLDSLRQQGFLTDDLVSQEENGQQQKYLGVCRLPGPGKRHRRLDIIVVPYCEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSAAVVRNSQGVKVGPGQVLPTPTEKDVFKHLGLPYREPAERD 572
BLAST of CX046895 vs. ExPASy Swiss-Prot
Match: DPOLB_RAT (DNA polymerase beta OS=Rattus norvegicus GN=Polb PE=1 SV=4) HSP 1 Score: 119.398 bits (298), Expect = 2.192e-26 Identity = 74/220 (33.64%), Postives = 124/220 (56.36%), Query Frame = 1 Query: 1 TLDDL-KNEDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKG----FLSKYVKKLKEMKFLREDL------------IFSTHSEEVY----------PRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 579 TL+DL KNED L H QR+GLKYF+D + RIPR E+ QM+ ++ +++ PE I GS+RRG S GD+DV++ HP+ S L + V++L++++F+ + L + S + E Y P+D Y G++ +TG+D+ N+ +R A KG+ +++ + P G GV A L D+E+++FD++ + + EP +R+ Sbjct: 121 TLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVKKLDPEYIATVCGSFRRGAESSGDMDVLLTHPNFTSESSKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQLPSENDENEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPL-----GVTGV-AGEPLPVDSEQDIFDYIQWRYREPKDRS 334
BLAST of CX046895 vs. ExPASy Swiss-Prot
Match: DPOLB_BOVIN (DNA polymerase beta OS=Bos taurus GN=POLB PE=2 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 2.192e-26 Identity = 75/220 (34.09%), Postives = 123/220 (55.91%), Query Frame = 1 Query: 1 TLDDL-KNEDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKG----FLSKYVKKLKEMKFLREDL------------IFSTHSEEVY----------PRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 579 TL+DL KNED L H QR+GLKYF+D + RIPR E+ QM+ ++ ++V E I GS+RRG S GD+DV++ HP S L + V++L++++F+ + L + S + E+ Y P+D Y G++ +TG+D+ N+ +R A KG+ +++ + P G GV A L D+EK++FD++ + + EP +R+ Sbjct: 121 TLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLSEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESAKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPL-----GVTGV-AGEPLPVDSEKDIFDYIQWKYREPKDRS 334
BLAST of CX046895 vs. ExPASy Swiss-Prot
Match: DPOLB_XENLA (DNA polymerase beta OS=Xenopus laevis GN=polb PE=1 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 6.376e-26 Identity = 73/219 (33.33%), Postives = 118/219 (53.88%), Query Frame = 1 Query: 1 TLDDLKN-EDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKG----FLSKYVKKLKEMKFLREDLI-----------FSTHSEEVY----------PRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 579 TLDDL+N E L H Q++GLK+FDD + RIPR E+ QM+ ++ + PE I GS+RRG S GD+D+++ HPD S L + V+ L++ F+ + L+ S++ Y P+D Y G++ +TG+D+ N+ +R A KG+ L++ L P G G+ A L D+EK++FD++ + + EP +R+ Sbjct: 121 TLDDLRNNEHKLNHHQKIGLKHFDDFEKRIPRKEMLQMQEIILDKVNNLDPEYIATVCGSFRRGAESSGDMDILLTHPDFTSESAKQPRLLHQVVQCLEDCNFITDTLVKGDTKFMGVCQLPCESDQDYPYRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTLRPL-----GVTGI-AGEPLPIDSEKDIFDYIQWKYREPKDRS 333
BLAST of CX046895 vs. ExPASy Swiss-Prot
Match: DPOLB_HUMAN (DNA polymerase beta OS=Homo sapiens GN=POLB PE=1 SV=3) HSP 1 Score: 115.931 bits (289), Expect = 2.423e-25 Identity = 75/220 (34.09%), Postives = 121/220 (55.00%), Query Frame = 1 Query: 1 TLDDL-KNEDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHK----GFLSKYVKKLKEMKFLREDL------------IFSTHSEEVY----------PRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 579 TL+DL KNED L H QR+GLKYF D + RIPR E+ QM+ ++ ++V E I GS+RRG S GD+DV++ HP S L + V++L+++ F+ + L + S + E+ Y P+D Y G++ +TG+D+ N+ +R A KG+ +++ + P G GV A L D+EK++FD++ + + EP +R+ Sbjct: 121 TLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPL-----GVTGV-AGEPLPVDSEKDIFDYIQWKYREPKDRS 334
BLAST of CX046895 vs. ExPASy Swiss-Prot
Match: DPOLB_MOUSE (DNA polymerase beta OS=Mus musculus GN=Polb PE=2 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 7.050e-25 Identity = 73/220 (33.18%), Postives = 122/220 (55.45%), Query Frame = 1 Query: 1 TLDDL-KNEDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKG----FLSKYVKKLKEMKFLREDL---------IFSTHSEE-------------VYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 579 TL+DL KNED L H QR+GLKYF+D + RIPR E+ QM+ ++ ++V E I GS+RRG S GD+DV++ HP+ S L + V++L+++ F+ + L + SE+ + P+D Y G++ +TG+D+ N+ +R A KG+ +++ + P G GV A L D+E+++FD++ + + EP +R+ Sbjct: 121 TLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEIKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPNFTSESSKQPKLLHRVVEQLQKVHFITDTLSKGETKFMGVCQLPSEKDGKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPL-----GVTGV-AGEPLPVDSEQDIFDYIQWRYREPKDRS 334
BLAST of CX046895 vs. ExPASy Swiss-Prot
Match: DPOLB_DANRE (DNA polymerase beta OS=Danio rerio GN=polb PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 72/221 (32.58%), Postives = 116/221 (52.49%), Query Frame = 1 Query: 4 LDDLKN-EDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQKAGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHK-----------------GFLSKYVKK-----------LKEMKFLREDLIFSTHSEEVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERN 579 L+DLK E L H Q++GLKYF++ + RIPR E+++ME L+ K + V PE I GSYRRG S GD+D+++ HPD S GF++ + K KE + E+ + + P+D Y G++ +TG+D+ N+ +R A KG+ L++ + P G GV A L D+EK++F+++ + + EP +R+ Sbjct: 121 LEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRSEMQKMEALILKELDIVDPEYIGTICGSYRRGAESSGDIDILLTHPDFTSQSEKQPKLLHAVVDHLESIGFITDTLSKGDTKFMGVCQLQKEKEEEEEESLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIRPL-----GVTGV-AGEPLLVDSEKDIFEYIQWKYREPKDRS 335 The following BLAST results are available for this feature:
BLAST of CX046895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046895 ID=CX046895; Name=CX046895; organism=Citrus sinensis; type=EST; length=765bpback to top |