EY735345

Overview
NameEY735345
Unique NameEY735345
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length373
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735345 vs. ExPASy Swiss-Prot
Match: CATB_PSEPU (Muconate cycloisomerase 1 OS=Pseudomonas putida GN=catB PE=1 SV=4)

HSP 1 Score: 96.2857 bits (238), Expect = 5.099e-20
Identity = 62/116 (53.45%), Postives = 71/116 (61.21%), Query Frame = 2
Query:   29 DLPTIRQ-HKLAMPHYA*PNPVWSSLCAAPTVSHALVNPLDQSCGLNYCNESPDRILAYIDRHFAPLLLGQDASNINAAMLRLERSIRGNTFAKSGIESALLDTLGKRLNLPVSEL 373
            DLPTIR  HKLAM        V   +  +  V    +       GL Y  ESP+ I A ID H AP L+G  A NINAAML+L++  +GNTFAKSGIESALLD  GKRL LPVSEL
Sbjct:   16 DLPTIRPPHKLAMHTMQTQTLVLIRVRCSDGVEG--IGEATTIGGLAYGYESPEGIKANIDAHLAPALVGLPADNINAAMLKLDKLAKGNTFAKSGIESALLDAQGKRLGLPVSEL 129          
BLAST of EY735345 vs. ExPASy Swiss-Prot
Match: CATB1_ACILW (Muconate cycloisomerase 1-1 OS=Acinetobacter lwoffii GN=catB1 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.217e-13
Identity = 48/117 (41.03%), Postives = 65/117 (55.56%), Query Frame = 2
Query:   26 VDLPTIRQHKLAMPH-YA*PNPVWSSLCAAPTVSHALVNPLDQSCGLNYCNESPDRILAYIDRHFAPLLLGQDASNINAAMLRLERSIRGNTFAKSGIESALLDTLGKRLNLPVSEL 373
            VDLPTIR HKL++   Y     +    C    V    +       G+ Y  ESP+ +   ID +FAP L+G+DA+ I   M  L + ++ N FAKS +E+ALLD  GKRL + VSEL
Sbjct:   14 VDLPTIRPHKLSVATMYGQTLMLVKVYCTDGAVG---IGEGTTIAGMAYGPESPEAMKLAIDAYFAPALVGKDATRIQTLMAHLGKLVKINHFAKSALETALLDAHGKRLGVAVSEL 127          
BLAST of EY735345 vs. ExPASy Swiss-Prot
Match: CATB2_ACILW (Muconate cycloisomerase 1-2 OS=Acinetobacter lwoffii GN=catB2 PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.710e-13
Identity = 49/117 (41.88%), Postives = 64/117 (54.70%), Query Frame = 2
Query:   26 VDLPTIRQHKLAMPHYA*PNPVWSSL-CAAPTVSHALVNPLDQSCGLNYCNESPDRILAYIDRHFAPLLLGQDASNINAAMLRLERSIRGNTFAKSGIESALLDTLGKRLNLPVSEL 373
            VD+PTIR H+L++        V   + CA   V    V       GL Y  ESP+ I   ID +FAPLL G DA+   AAM  L    +GN FA+S +E+AL D   +RL +P+SEL
Sbjct:   16 VDVPTIRPHRLSVATMNCQTLVLVRIRCADGVVG---VGEGTTIGGLAYGEESPESIKVNIDTYFAPLLKGLDATRPGAAMATLRGLFQGNRFARSAVETALFDAQAQRLGVPLSEL 129          
BLAST of EY735345 vs. ExPASy Swiss-Prot
Match: CATB_ACIAD (Muconate cycloisomerase 1 OS=Acinetobacter sp. (strain ADP1) GN=catB PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 7.885e-13
Identity = 49/128 (38.28%), Postives = 66/128 (51.56%), Query Frame = 2
Query:   26 VDLPTIRQHKLAMPHYA*PNPVWSSLCAAPTVSHALVNPLDQSC-----------GLNYCNESPDRILAYIDRHFAPLLLGQDAS-NINAAMLRLERSIRGNTFAKSGIESALLDTLGKRLNLPVSEL 373
            VD+PTIR HKL             S+    T +  L+  + +             GLNY  ESP+ + A ID +F PLLL   A  N+   +  + +SI GN FAK  I++ALL+   KRLN+PVSEL
Sbjct:   10 VDIPTIRPHKL-------------SVTTMQTQTLVLIKIITEDGIVGWGEATTIGGLNYGEESPESVKANIDTYFKPLLLSIKAPLNVAQTLKLIRKSINGNRFAKCAIQTALLEIQAKRLNVPVSEL 124          
The following BLAST results are available for this feature:
BLAST of EY735345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
CATB_PSEPU5.099e-2053.45Muconate cycloisomerase 1 OS=Pseudomonas putida GN... [more]
CATB1_ACILW1.217e-1341.03Muconate cycloisomerase 1-1 OS=Acinetobacter lwoff... [more]
CATB2_ACILW2.710e-1341.88Muconate cycloisomerase 1-2 OS=Acinetobacter lwoff... [more]
CATB_ACIAD7.885e-1338.28Muconate cycloisomerase 1 OS=Acinetobacter sp. (st... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-096-D03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735345 ID=EY735345; Name=EY735345; organism=Citrus sinensis; type=EST; length=373bp
GGTCCCGGGTCCCGGAAATTCCCGGGTCGACCTTCCTACCATCCGCCAGC
ACAAGCTGGCGATGCCACACTATGCGTAACCAAACCCTGTGTGGTCCTCC
TTGTGCGCTGCGCCAACTGTATCTCACGCATTGGTGAATCCACTCGACCA
GTCGTGCGGCCTGAACTACTGCAATGAAAGCCCCGACAGAATACTCGCCT
ACATCGACCGGCACTTCGCGCCGCTGCTGCTCGGTCAGGACGCGAGCAAC
ATCAATGCCGCCATGTTGCGCCTGGAGCGCAGCATTCGGGGCAACACTTT
TGCCAAGTCGGGTATCGAAAGCGCCTTGCTCGACACCCTCGGCAAACGCC
TGAATTTGCCGGTCAGCGAGCTG
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