CX046779

Overview
NameCX046779
Unique NameCX046779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length128
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5603 contig Csv1_Contig5603:32..159. BLAST: Citrus Unigene V1 Contigs to TAIR9
Homology
[Close]
BLAST of CX046779 vs. ExPASy Swiss-Prot
Match: M030_ARATH (Uncharacterized mitochondrial protein AtMg00030 OS=Arabidopsis thaliana GN=AtMg00030 PE=4 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.173e-18
Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 1 
Query:    1 AKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLP 126
            AKF KSKERRLATELGYGFPIGDPWITDGISPWPFASESVLP
Sbjct:    5 AKFSKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLP 46
The following BLAST results are available for this feature:
BLAST of CX046779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
M030_ARATH2.173e-1897.62Uncharacterized mitochondrial protein AtMg00030 OS... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS09_10B06_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10B06-D11-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046779 ID=CX046779; Name=CX046779; organism=Citrus sinensis; type=EST; length=128bp
GCTAAGTTTGAAAAGTCCAAAGAGCGCAGACTAGCCACGGAGCTTGGATA
CGGTTTCCCGATCGGAGATCCATGGATCACAGACGGTATCTCCCCATGGC
CTTTCGCCTCTGAAAGCGTCCTTCCCCT
back to top