CX046686

Overview
NameCX046686
Unique NameCX046686
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046686 vs. ExPASy Swiss-Prot
Match: YBDL_ECOLI (Aminotransferase ybdL OS=Escherichia coli (strain K12) GN=ybdL PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.091e-21
Identity = 54/138 (39.13%), Postives = 80/138 (57.97%), Query Frame = -3
Query:  226 WAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFYMNPEDGKNLVRFTFCKDEGTLRSAVDRM 639
            + +AP  ++  +R+ H +LTF+ +TP Q A    LRA   +Y  L   Y  K+ ILV  LN    ++ P  GTYF++VD++      D+ FC++L +E GV AIP SVF  +P   K L+R  F K E TL +A +R+
Sbjct:  247 YCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHK-LIRLCFAKKESTLLAAAERL 383          
BLAST of CX046686 vs. ExPASy Swiss-Prot
Match: KAT_DICDI (Kynurenine--oxoglutarate transaminase OS=Dictyostelium discoideum GN=ccbl PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.761e-15
Identity = 51/158 (32.28%), Postives = 71/158 (44.94%), Query Frame = -3
Query:  226 WAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAP--ETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPF------GHETDIA----------FCEYLIKEVGVVAIPTSVFYMNPEDG--KNLVRFTFCKDEGTLRSAVDRM 639
            W I P ++   +   H ++ F+  TP Q A   AL  P  + Y++EL   Y  K+  L+  L   G       GTYF++ D +        G +T I              YL  E GV  IP S FY +      +N VRFTFCKD+ TL+ A D +
Sbjct:  273 WCIGPSNIIGAIANTHQYVPFSVPTPTQEAVAIALEQPNIKDYFKELATMYQNKRDTLLNSLTQAGLDPVIPQGTYFIMGDTSSIHLQGDQGKDTSITGMGLHLRDWNIARYLTTEYGVTTIPPSAFYCDDHQKIPENFVRFTFCKDDLTLQKAHDNL 430          
BLAST of CX046686 vs. ExPASy Swiss-Prot
Match: BNA3_YEAST (Probable kynurenine--oxoglutarate transaminase BNA3 OS=Saccharomyces cerevisiae GN=BNA3 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.472e-12
Identity = 45/142 (31.69%), Postives = 75/142 (52.82%), Query Frame = -3
Query:  226 QAHSFLTFATSTPMQWAATAALRAPET--YYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHT--------PFGHE-----TDIAFCEYLIKEVGVVAIPTSVFYMNPED--GKNLVRFTFCKDEGTLRSAVDRM 600
            +AH+ + FA+ +P+Q A   ++       Y+E+++++Y  K  I     + +G       GTYFV+VD +        P+  E      D     +LI E+GVVAIP + FY+   +   +NL+RF  CKD+  L +AV+R+
Sbjct:  296 KAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVERL 437          
The following BLAST results are available for this feature:
BLAST of CX046686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
YBDL_ECOLI4.091e-2139.13Aminotransferase ybdL OS=Escherichia coli (strain ... [more]
KAT_DICDI9.761e-1532.28Kynurenine--oxoglutarate transaminase OS=Dictyoste... [more]
BNA3_YEAST3.472e-1231.69Probable kynurenine--oxoglutarate transaminase BNA... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_9F02_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-9F02-L3-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046686 ID=CX046686; Name=CX046686; organism=Citrus sinensis; type=EST; length=827bp
TTTTTTTTTTATTGCAAGCCCAGTTTCTGCCATATTCATTAATTCAAATA
ATTTGATTCATTCATAAGTTTGGTAGTTTGTCTTCAAATTGTTGGGATAG
TACCTACCATTTATCCCCACATGCTTAACATCACACTACTCAAATCTTTA
ATCCACTACATCAACTGATTCAAATAAAATAGCCTTTAGCACTCACTTTG
ATCATTTTCTCCTCAGCTTCTCCTTCATCCTGTCAACTGCAGACCTCAAA
GTTCCTTCATCTTTGCAGAAGGTAAATCTCACCAAATTCTTTCCATCCTC
TGGATTCATGTAAAATACGCTGGTCGGAATTGCCACAACCCCAACTTCCT
TGATCAGATATTCACAAAATGCAATATCAGTTTCGTGCCCAAATGGGGTG
TGATCTACAACCACAAAGTATGTCCCACTAGATGGGAATACCTTGAAACC
AACAGCATTCAATCCCTCCACCAAAATTGCCTTCTTTGCCGAGTAATCTC
TCTTTAGCTCCTCATAGTACGTCTCCGGAGCTCTAAGGGCTGCTGTAGCT
GCCCACTGCATTGGAGTGGATGTGGCAAACGTGAGAAAAGAGTGTGCCTG
CCGCACCCCCCATGTAAGGTGCGGTGGAGCTATTGCCCACCTCCACCAAA
CCTGCCGATCAGAAAGGTTGGACGGGTTTTATACGGCAAGCCTCTGAGTT
TACAGCGATCTTTTATTGATACCACCATCACCATTAAGATCTCACGCCAT
CAGAATTACACTGATCGTGCCGGAGATGGCATGACGTTCATTTTTGCAAG
CGATAAAAACGGTCCATCAGCAAAGGG
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