CX046677

Overview
NameCX046677
Unique NameCX046677
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: KASC1_ARATH (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1 PE=2 SV=2)

HSP 1 Score: 275.404 bits (703), Expect = 4.081e-85
Identity = 135/147 (91.84%), Postives = 142/147 (96.60%), Query Frame = -1 
Query:  440 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTVANKK 880
            VLVMESLEHAMKRGAPI+AEYLGGAVNCDA+HMTDPRADGLGVSSCIE  LEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFK+T+GIKINATKSMIGHCLGAAGGLEAIATVKAI TGWLHPSINQFNPE +V+FDTV N+K
Sbjct:  298 VLVMESLEHAMKRGAPIVAEYLGGAVNCDAHHMTDPRADGLGVSSCIERCLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKSTSGIKINATKSMIGHCLGAAGGLEAIATVKAINTGWLHPSINQFNPEQAVDFDTVPNEK 444

HSP 2 Score: 61.6178 bits (148), Expect = 4.081e-85
Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = -2 
Query:  352 KKQQHEVNVAISNSFGFGGHNSVVAFSAFKP 444
            +K+QHEV+VAISNSFGFGGHNSVVAFSAFKP
Sbjct:  443 EKKQHEVDVAISNSFGFGGHNSVVAFSAFKP 473
[Close]
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: KASC1_HORVU (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Hordeum vulgare GN=KAS12 PE=1 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 7.600e-81
Identity = 128/147 (87.07%), Postives = 139/147 (94.56%), Query Frame = -1 
Query:  440 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTVANKK 880
            VLVMESLEHAMKR APIIAEYLGGAVNCDAYHMTDPRADGLGVSSCI  SL DAGV+PEEVNYINAHATSTLAGDLAE+ AIK+VFKN + IKIN+TKSMIGHCLGAAGGLEAIAT+K+ITTGW+HP+INQFNPEP V+FDTVAN+K
Sbjct:  287 VLVMESLEHAMKRDAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCITMSLRDAGVAPEEVNYINAHATSTLAGDLAEVRAIKQVFKNPSEIKINSTKSMIGHCLGAAGGLEAIATIKSITTGWVHPTINQFNPEPEVDFDTVANEK 433

HSP 2 Score: 57.3806 bits (137), Expect = 7.600e-81
Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = -2 
Query:  352 KKQQHEVNVAISNSFGFGGHNSVVAFSAFKP 444
            +K+QHEVNV ISNSFGFGGHNSVV F+ FKP
Sbjct:  432 EKKQHEVNVGISNSFGFGGHNSVVVFAPFKP 462
[Close]
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: FABF_SYNY3 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp. (strain PCC 6803) GN=fabF PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 5.806e-37
Identity = 71/150 (47.33%), Postives = 97/150 (64.67%), Query Frame = -1 
Query:  434 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKN-TTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTVANKKTA 880
            +L++E LE A+ RGA I  E +G A+ CDAYH+T P  DG G +  I  +L+D+G+ PE V+YINAH TST A D+ E  AIK+   N    I +++TKSM GH LG +GG+EA+ATV AI    + P+IN  NP+P  + D V  +  A
Sbjct:  241 ILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQSRA 390

HSP 2 Score: 37.3502 bits (85), Expect = 5.806e-37
Identity = 15/24 (62.50%), Postives = 20/24 (83.33%), Query Frame = -2 
Query:  355 VNVAISNSFGFGGHNSVVAFSAFK 426
            V+VA+SNSFGFGGHN  +AF  ++
Sbjct:  393 VDVALSNSFGFGGHNVTLAFKKYQ 416
[Close]
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: FABF_STAAW (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MW2) GN=fabF PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.948e-34
Identity = 66/147 (44.90%), Postives = 96/147 (65.31%), Query Frame = -1 
Query:  443 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVF-KNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTVANK 880
            +LV+ESLE A  RGA I AE +G     DAYH+T P  +G G S  ++++++DAG+ P++V Y+NAH TST  GDL E+ AIK  F +    +K+++TKSM GH LGA GG+EAI +  +I    + P+I+   P+P  + D V N+
Sbjct:  238 ILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNE 384

HSP 2 Score: 35.8094 bits (81), Expect = 1.948e-34
Identity = 14/28 (50.00%), Postives = 20/28 (71.43%), Query Frame = -2 
Query:  355 QQHEVNVAISNSFGFGGHNSVVAFSAFK 438
            Q  ++  A+SNS GFGGHN+V+ F  F+
Sbjct:  386 QDLDITYAMSNSLGFGGHNAVLVFKKFE 413
[Close]
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: FABF_STAAS (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MSSA476) GN=fabF PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.948e-34
Identity = 66/147 (44.90%), Postives = 96/147 (65.31%), Query Frame = -1 
Query:  443 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVF-KNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTVANK 880
            +LV+ESLE A  RGA I AE +G     DAYH+T P  +G G S  ++++++DAG+ P++V Y+NAH TST  GDL E+ AIK  F +    +K+++TKSM GH LGA GG+EAI +  +I    + P+I+   P+P  + D V N+
Sbjct:  238 ILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNE 384

HSP 2 Score: 35.8094 bits (81), Expect = 1.948e-34
Identity = 14/28 (50.00%), Postives = 20/28 (71.43%), Query Frame = -2 
Query:  355 QQHEVNVAISNSFGFGGHNSVVAFSAFK 438
            Q  ++  A+SNS GFGGHN+V+ F  F+
Sbjct:  386 QDLDITYAMSNSLGFGGHNAVLVFKKFE 413
[Close]
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: FABF_STAAR (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MRSA252) GN=fabF PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.948e-34
Identity = 66/147 (44.90%), Postives = 96/147 (65.31%), Query Frame = -1 
Query:  443 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVF-KNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTVANK 880
            +LV+ESLE A  RGA I AE +G     DAYH+T P  +G G S  ++++++DAG+ P++V Y+NAH TST  GDL E+ AIK  F +    +K+++TKSM GH LGA GG+EAI +  +I    + P+I+   P+P  + D V N+
Sbjct:  238 ILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNE 384

HSP 2 Score: 35.8094 bits (81), Expect = 1.948e-34
Identity = 14/28 (50.00%), Postives = 20/28 (71.43%), Query Frame = -2 
Query:  355 QQHEVNVAISNSFGFGGHNSVVAFSAFK 438
            Q  ++  A+SNS GFGGHN+V+ F  F+
Sbjct:  386 QDLDITYAMSNSLGFGGHNAVLVFKKFE 413
[Close]
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: FABF_STAAN (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain N315) GN=fabF PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.948e-34
Identity = 66/147 (44.90%), Postives = 96/147 (65.31%), Query Frame = -1 
Query:  443 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVF-KNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTVANK 880
            +LV+ESLE A  RGA I AE +G     DAYH+T P  +G G S  ++++++DAG+ P++V Y+NAH TST  GDL E+ AIK  F +    +K+++TKSM GH LGA GG+EAI +  +I    + P+I+   P+P  + D V N+
Sbjct:  238 ILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNE 384

HSP 2 Score: 35.8094 bits (81), Expect = 1.948e-34
Identity = 14/28 (50.00%), Postives = 20/28 (71.43%), Query Frame = -2 
Query:  355 QQHEVNVAISNSFGFGGHNSVVAFSAFK 438
            Q  ++  A+SNS GFGGHN+V+ F  F+
Sbjct:  386 QDLDITYAMSNSLGFGGHNAVLVFKKFE 413
[Close]
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: FABF_STAAM (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabF PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.948e-34
Identity = 66/147 (44.90%), Postives = 96/147 (65.31%), Query Frame = -1 
Query:  443 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVF-KNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTVANK 880
            +LV+ESLE A  RGA I AE +G     DAYH+T P  +G G S  ++++++DAG+ P++V Y+NAH TST  GDL E+ AIK  F +    +K+++TKSM GH LGA GG+EAI +  +I    + P+I+   P+P  + D V N+
Sbjct:  238 ILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNE 384

HSP 2 Score: 35.8094 bits (81), Expect = 1.948e-34
Identity = 14/28 (50.00%), Postives = 20/28 (71.43%), Query Frame = -2 
Query:  355 QQHEVNVAISNSFGFGGHNSVVAFSAFK 438
            Q  ++  A+SNS GFGGHN+V+ F  F+
Sbjct:  386 QDLDITYAMSNSLGFGGHNAVLVFKKFE 413
[Close]
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: FABF_STAAC (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain COL) GN=fabF PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.948e-34
Identity = 66/147 (44.90%), Postives = 96/147 (65.31%), Query Frame = -1 
Query:  443 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVF-KNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTVANK 880
            +LV+ESLE A  RGA I AE +G     DAYH+T P  +G G S  ++++++DAG+ P++V Y+NAH TST  GDL E+ AIK  F +    +K+++TKSM GH LGA GG+EAI +  +I    + P+I+   P+P  + D V N+
Sbjct:  238 ILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNE 384

HSP 2 Score: 35.8094 bits (81), Expect = 1.948e-34
Identity = 14/28 (50.00%), Postives = 20/28 (71.43%), Query Frame = -2 
Query:  355 QQHEVNVAISNSFGFGGHNSVVAFSAFK 438
            Q  ++  A+SNS GFGGHN+V+ F  F+
Sbjct:  386 QDLDITYAMSNSLGFGGHNAVLVFKKFE 413
[Close]
BLAST of CX046677 vs. ExPASy Swiss-Prot
Match: FABF_STAAU (3-oxoacyl-[acyl-carrier-protein] synthase 2 (Fragment) OS=Staphylococcus aureus GN=fabF PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 7.306e-34
Identity = 66/147 (44.90%), Postives = 96/147 (65.31%), Query Frame = -1 
Query:  443 VLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIESSLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVF-KNTTGIKINATKSMIGHCLGAAGGLEAIATVKAITTGWLHPSINQFNPEPSVEFDTVANK 880
            +LV+ESLE A  RGA I AE +G     DAYH+T P  +G G S  ++++++DAG+ P++V Y+NAH TST  GDL E+ AIK  F +    +K+++TKSM GH LGA GG+EAI +  +I    + P+I+   P+P  + D V N+
Sbjct:  231 ILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKIAPTIHAVTPDPECDLDIVPNE 377

HSP 2 Score: 33.4982 bits (75), Expect = 7.306e-34
Identity = 13/24 (54.17%), Postives = 18/24 (75.00%), Query Frame = -2 
Query:  367 QQHEVNVAISNSFGFGGHNSVVAF 438
            Q  ++  A+SNS GFGGHN+V+ F
Sbjct:  379 QDLDITYAMSNSLGFGGHNAVLVF 402
The following BLAST results are available for this feature:
BLAST of CX046677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
KASC1_ARATH4.081e-8591.843-oxoacyl-[acyl-carrier-protein] synthase I, chlor... [more]
KASC1_HORVU7.600e-8187.073-oxoacyl-[acyl-carrier-protein] synthase I, chlor... [more]
FABF_SYNY35.806e-3747.333-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Syn... [more]
FABF_STAAW1.948e-3444.903-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_STAAS1.948e-3444.903-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_STAAR1.948e-3444.903-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_STAAN1.948e-3444.903-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_STAAM1.948e-3444.903-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_STAAC1.948e-3444.903-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_STAAU7.306e-3444.903-oxoacyl-[acyl-carrier-protein] synthase 2 (Fragm... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_9E09_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-9E09-J17-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046677 ID=CX046677; Name=CX046677; organism=Citrus sinensis; type=EST; length=880bp
TTTTAAATAAACCATAGCCCATCAGCTAAGATCTGAAATTCCCACATAAC
AAACAATGAAGAACAGAGCCACGAGTGATATTAATGCTAGACCTCGGCGG
CTCATTCTTCTGTCCACAGCATAATTAAAAATCTGACAAAATTTCATGCC
CTCTCAACTAGCCTCATAAATCCAATGGTTGAAAGGAGAAAATGGCTCAT
TATCCTGAACTAAAATCCAACTTACAATTATTACATAACTGTTACAAAAG
CCTCAAAATAAATATGCAGCAACTCAATAGACAGGATGATGCGGCTCCTT
GGCCAATTAATGACCAGATCTTCTAGACTTATGAACAGGCTGGATGATTC
ATGGTTTGAATGCAGAAAATGCAACGACAGAGTTGTGCCCTCCAAATCCA
AATGAATTAGAGATGGCAACATTCACTTCATGCTGCTGTTTTTTTGTTGG
CGACAGTGTCGAACTCAACTGAAGGTTCAGGGTTAAATTGATTAATGGAA
GGATGCAGCCATCCCGTGGTTATTGCCTTGACAGTGGCAATTGCTTCCAA
ACCCCCAGCTGCACCAAGGCAGTGCCCTATCATAGACTTCGTGGCATTGA
TTTTGATCCCTGTGGTGTTCTTGAACACCTTTTTAATAGCATTTATCTCA
GCCAGGTCACCAGCTAAAGTGGAAGTTGCGTGAGCATTTATGTAGTTGAC
CTCCTCAGGTGACACACCAGCATCTTCAAGGCTGCTCTCAATGCATGAAG
ACACTCCAAGTCCATCAGCTCTGGGGTCAGTCATATGATAAGCATCACAA
TTAACAGCACCCCCTAAGTACTCTGCTATGATCGGTGCACCTCGTTTCAT
TGCATGTTCCAAGCTCTCCATCACCAATAC
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