EY735300

Overview
NameEY735300
Unique NameEY735300
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY735300_ssr471 microsatellite EY735300_ssr471:471..480. BLAST: Citrus ESTs to SwissProt
Homology
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BLAST of EY735300 vs. ExPASy Swiss-Prot
Match: ARS_PSEAE (Arylsulfatase OS=Pseudomonas aeruginosa GN=atsA PE=1 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 2.772e-24
Identity = 56/103 (54.37%), Postives = 70/103 (67.96%), Query Frame = 3 
Query:    3 YRGRYDAGPEVXXXXXXXXXXXXXXIDADVEPHPLIELNTQWAALSDEQRQVSARAMEVYAAMVERMDWNISRVVK*LRKPRQVRHTFMLFMSEKRAKECLLQ 311
            YRGRYDAGPE               ++ADVE HP++ L  +W AL DE+R  SARAMEVYAAMVERMDWNI RVV  LR+  ++ +TF+LFMS+  A+  LL+
Sbjct:  224 YRGRYDAGPEALRQERLARLKELGLVEADVEAHPVLALTREWEALEDEERAKSARAMEVYAAMVERMDWNIGRVVDYLRRQGELDNTFVLFMSDNGAEGALLE 326
[Close]
BLAST of EY735300 vs. ExPASy Swiss-Prot
Match: YHJ2_SCHPO (Uncharacterized sulfatase PB10D8.02c OS=Schizosaccharomyces pombe GN=SPBPB10D8.02c PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.875e-13
Identity = 43/113 (38.05%), Postives = 65/113 (57.52%), Query Frame = 3 
Query:    3 YRGRYDAGPEVXXXXXXXXXXXXXXIDADVEPHPLIELNTQ-WAALSDEQRQVSARAMEVYAAMVERMDWNISRVVK*LRKPRQVRHTFMLFMSEKRAKECLLQRLLQLQAGP 338
            YRGRY  GP+V              I  +V P P+  + T+ W  L+ E+++ SAR MEVYAAMVE +D NI RV+  L+   ++ +TF++FMS+  A+  +L+ +  L   P
Sbjct:  233 YRGRYSEGPDVLRKNRLQAQKDLGLIPENVIPAPVDGMGTKSWDELTTEEKEFSARTMEVYAAMVELLDLNIGRVIDYLKTIGELDNTFVIFMSDNGAEGSVLEAIPVLSTKP 345
The following BLAST results are available for this feature:
BLAST of EY735300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ARS_PSEAE2.772e-2454.37Arylsulfatase OS=Pseudomonas aeruginosa GN=atsA PE... [more]
YHJ2_SCHPO2.875e-1338.05Uncharacterized sulfatase PB10D8.02c OS=Schizosacc... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-E01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735300 ID=EY735300; Name=EY735300; organism=Citrus sinensis; type=EST; length=934bp
AATACCGTGGCCGCTACGATGCCGGCCCCGAAGTGTTGCGCCTGGAACGC
CTGGAAAAACTCAAGGCGCTGGGGCTGATCGATGCGGATGTGGAACCCCA
TCCGTTGATCGAATTGAACACCCAGTGGGCGGCCCTGAGCGACGAGCAAC
GCCAGGTGTCGGCGCGGGCGATGGAGGTGTATGCAGCAATGGTCGAGCGC
ATGGACTGGAACATCAGCCGGGTGGTCAAATAACTGCGCAAACCAAGGCA
AGTGCGACACACCTTTATGCTGTTCATGTCAGAAAAACGTGCCAAAGAGT
GCCTGCTGCAGAGACTTCTCCAGCTTCAGGCCGGACCATCTGCACCTAAC
CACAGCGTAATAGAAACAAACGAATGGAGAACAACTGGCGACGAGTTTTC
AGCAAGCTGGGAAACGGCCGACATCTGACGAGGGACGAAGAGACGAGAGA
CGGCACGGAAACAGGCTGGCAGAGAGAGAGGGAGAGACGAAGCGCCGAGA
GAAGAGGGCGACACGGAAAAAACGCGCAAAAGAAGCGGGAAGGCACAGGA
AGAAGCGAAAGGACGAAAACAGGGTGCGAGGGAGGACGGCGAAGGGGGCG
AGATACGGCGCACGGGAAGCGAGGACAACAAGCGGAGAAGGCGCGACAGG
ACGCAGAAGAAGAAACCAAGGAAGAGAGAAGACAACGGGAGCACAACAAA
GGGAAGCCAGCCGAAGAGCGCAAAGGAAACCAAAAGACGTGGCCGAGAAA
GGGAACCAAAAAAGAATGCGAGAAACGAGGACGATAAGAGGAAAGCGAGG
TGCAGGAGAAGAACACGAGAAACAACGACAACGGGGAAAGAAGAAGGGAA
CAAAGGGGAGAGAAGGGGGGGAGATGCGGAAAAGAAAAGGAGGGGGCGAA
ACACAAGCAAAGGAGGAACAAGAGAGAAGGGAGA
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