CX046658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046658 vs. ExPASy Swiss-Prot
Match: CLH1_CITUN (Chlorophyllase-1, chloroplastic OS=Citrus unshiu PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.785e-59 Identity = 112/199 (56.28%), Postives = 136/199 (68.34%), Query Frame = -2 Query: 228 LPENVXANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSHDSFEFSIPXXXXXXXXXXXTKCMQPCAPENKNHEQFFKRCTYSDHAHFDAKDYGHMDILDDNPQGPKNWAISKFLCTNGKKPRDPMRRCVAGIAAAFLKAYFDGDCEDFRTMLKDPSLAPIELDEVEFIPAA 824 LPEN AN++ VA+MGHSRGG AF L+L Y A++G+DPVAG + + L+P ILS DSF+FSIP +C+ CAPE NHE+FF RC S AHF A DYGHMDILDDNP K+WA+SK+ C NG + RDPMRRCV+GI AFLK +FDGD EDFR +LKDPS API+LD VE+I A+ Sbjct: 130 LPENTEANVSLVAVMGHSRGGQTAFALSLRYG--------FGAVIGLDPVAGTSKT-TGLDPSILSFDSFDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFDGDAEDFRQILKDPSFAPIKLDSVEYIDAS 319
BLAST of CX046658 vs. ExPASy Swiss-Prot
Match: CLH1_CITSI (Chlorophyllase-1, chloroplastic OS=Citrus sinensis GN=CHLASE1 PE=1 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 4.185e-58 Identity = 111/199 (55.78%), Postives = 135/199 (67.84%), Query Frame = -2 Query: 228 LPENVXANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSHDSFEFSIPXXXXXXXXXXXTKCMQPCAPENKNHEQFFKRCTYSDHAHFDAKDYGHMDILDDNPQGPKNWAISKFLCTNGKKPRDPMRRCVAGIAAAFLKAYFDGDCEDFRTMLKDPSLAPIELDEVEFIPAA 824 LPEN AN++ VA+MGHSRGG AF L+L Y A++G+DPVAG + + L+P ILS DSF+FSIP +C+ CAPE NHE+FF RC S AHF A DYGHMDILDDNP K+WA+SK+ C NG + RDPMRRCV+GI AFLK +F GD EDFR +LKDPS API+LD VE+I A+ Sbjct: 130 LPENTEANVSLVAVMGHSRGGQTAFALSLRYG--------FGAVIGLDPVAGTSKT-TGLDPSILSFDSFDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFYGDAEDFRQILKDPSFAPIKLDSVEYIDAS 319
BLAST of CX046658 vs. ExPASy Swiss-Prot
Match: CLH1_ARATH (Chlorophyllase-1 OS=Arabidopsis thaliana GN=CLH1 PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.448e-34 Identity = 85/194 (43.81%), Postives = 117/194 (60.31%), Query Frame = -2 Query: 252 LPENVXANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSH--DSFEFSIP-XXXXXXXXXXXTKCMQPCAPENKNHEQFFKRCTYSDHAHFDAKDYGHMDILDDNPQGPKNWAISKFLCTNGKKPRDPMRRCVAGIAAAFLKAYFDGDCEDFRTMLKDPSLAPIELD 824 LP +V AN Y +L+GHSRGG AF +ALG+A SI SAL+GIDPVAG + + +P IL++ +SFE IP M PCAP + NHE+F+K C + AHF A DYGHMD+LDD+ G + ++ +C NG++ + MR V GI AFLK G+ + R ++KDPS++P +LD Sbjct: 121 LPTSVNANGKYTSLVGHSRGGKTAFAVALGHAATLDPSITFSALIGIDPVAG-TNKYIRTDPHILTYKPESFELDIPVAVVGTGLGPKWNNVMPPCAPTDLNHEEFYKECK-ATKAHFVAADYGHMDMLDDDLPGFVGF-MAGCMCKNGQRKKSEMRSFVGGIVVAFLKYSLWGEKAEIRLIVKDPSVSPAKLD 311
BLAST of CX046658 vs. ExPASy Swiss-Prot
Match: CLH2_ARATH (Chlorophyllase-2, chloroplastic OS=Arabidopsis thaliana GN=CLH2 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.698e-28 Identity = 84/206 (40.78%), Postives = 113/206 (54.85%), Query Frame = -2 Query: 237 LPENVXANLNYVALMGHSRGGLIAFGLAL---GYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSH--DSFEFS---IPXXXXXXXXXXXTKCMQPCAPENKNHEQFFKRCTYSDHAHFDAKDYGHMDILDDNPQGPKNWAISKFLCTNGKKPRDPMRRCVAGIAAAFLKAYFDGDCEDFRTMLKD--PSLAPIELDEVEFI 824 LP V NL+ AL GHSRGG AF +AL GY++N +KIS L+GIDPV G + PP+L++ +SF+ I PCAP NH +FF+ C HF AKDYGH+D+LDD+ +G + + S LC NG++ R PMRR V G+ +FLKAY +GD + +KD P+E+ E E I Sbjct: 121 LPAQVTPNLSKFALSGHSRGGKTAFAVALKKFGYSSN----LKISTLIGIDPVDGTGK-GKQTPPPVLAYLPNSFDLDKTPILVIGSGLGETARNPLFPPCAPPGVNHREFFRECQ-GPAWHFVAKDYGHLDMLDDDTKGIRGKS-SYCLCKNGEE-RRPMRRFVGGLVVSFLKAYLEGDDREL-VKIKDGCHEDVPVEIQEFEVI 317
BLAST of CX046658 vs. ExPASy Swiss-Prot
Match: CLH0_CHEAL (Chlorophyllase type 0 OS=Chenopodium album GN=CACLH PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.150e-23 Identity = 71/188 (37.77%), Postives = 102/188 (54.26%), Query Frame = -2 Query: 255 VXANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSH--DSFEFSIPXXXXXXXXXXXTKCMQPCAPENKNHEQFFKRCTYSDHAHFDAKDYGHMDILDDNPQGPKNWAISKFLCTNGKKPRDPMRRCVAGIAAAFLKAYFDGDCEDFRTMLKDPSLAPIEL 812 V +L +A+ GHSRGG AF LALG++ N + + SAL+G+DPVAG SV P +L++ +SF SIP T CAP + +H+QF+ C + +HF YGHMD+L++ P +S +C +P+ MRR + GI AFL AYF D + ++ + SLAP L Sbjct: 149 VEGDLEKLAISGHSRGGKSAFALALGFS-NIKLDVTFSALIGVDPVAG-RSVDDRTLPHVLTYKPNSFNLSIPVTVIGSGLGNHTIS---CAPNHVSHQQFYDECK-ENSSHFVITKYGHMDMLNEFRLSPIAVTMS-LMCAQSFRPKATMRRTLGGIMVAFLNAYFRDDGRQYYAIIANRSLAPTNL 329 The following BLAST results are available for this feature:
BLAST of CX046658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX046658 ID=CX046658; Name=CX046658; organism=Citrus sinensis; type=EST; length=828bpback to top |