EY662381

Overview
NameEY662381
Unique NameEY662381
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length430
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7735 contig Csv1_Contig7735:1..430. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY662381 vs. ExPASy Swiss-Prot
Match: PTR2_ARATH (Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.841e-32
Identity = 67/135 (49.63%), Postives = 90/135 (66.67%), Query Frame = 1
Query:    1 SSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIDHTDDFRY 405
            SSFGADQFD+     +     FFN+FY S+ +GA+V+ +L+V+IQ   GWG  FG   + MG++   FF GTPLYR + PGGSP+TR++QV+VA+FRK          + LYE   K+SAI GS KI+HTDD +Y
Sbjct:  179 SSFGADQFDDTDSRERVRKASFFNWFYFSINIGALVSSSLLVWIQENRGWGLGFGIPTVFMGLAIASFFFGTPLYRFQKPGGSPITRISQVVVASFRKSSVKVPEDATL-LYETQDKNSAIAGSRKIEHTDDCQY 312          
BLAST of EY662381 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 7.736e-30
Identity = 66/135 (48.89%), Postives = 88/135 (65.19%), Query Frame = 1
Query:    1 SSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIDHTDDFRY 405
            SSFGADQFDE  ++ K     FFN+FY S+ VGA++A T++V+IQM  GWG  FG   +AM I+   FF G+  YR + PGGSPLTR+ QV+VAAFRK        + + L+E     S IKGS K+ HTD+ ++
Sbjct:  161 SSFGADQFDENDENEKIKKSSFFNWFYFSINVGALIAATVLVWIQMNVGWGWGFGVPTVAMVIAVCFFFFGSRFYRLQRPGGSPLTRIFQVIVAAFRKISVKVPEDKSL-LFETADDESNIKGSRKLVHTDNLKF 294          
BLAST of EY662381 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.851e-26
Identity = 60/130 (46.15%), Postives = 82/130 (63.08%), Query Frame = 1
Query:    1 SSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIDHT 390
            SSFGADQFD+  +  K     FFN+FY  + VGA++A +++V+IQM  GWG   G   +AM I+ + FF G+  YR + PGGSPLTR+ QV+VA+ RK        E + LYE     S+I GS K++HT
Sbjct:  161 SSFGADQFDDTDEKEKESKSSFFNWFYFVINVGAMIASSVLVWIQMNVGWGWGLGVPTVAMAIAVVFFFAGSNFYRLQKPGGSPLTRMLQVIVASCRKSKVKIPEDESL-LYENQDAESSIIGSRKLEHT 289          
BLAST of EY662381 vs. ExPASy Swiss-Prot
Match: PTR3A_ARATH (Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.727e-21
Identity = 52/135 (38.52%), Postives = 79/135 (58.52%), Query Frame = 1
Query:    1 SSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIDHTDDFRY 405
            S+ GADQFD      KT    FFN++  S+  G + A T++VY+Q   GW   +G   + + IS  +F +GTP YRH+LP GSP T++A+V+VA+FRK +A   + ++   +E+P      KG+  I  T   R+
Sbjct:  168 STIGADQFDVFDPKEKTQKLSFFNWWMFSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRHKLPTGSPFTKMARVIVASFRKANAPM-THDITSFHELPSLEYERKGAFPIHPTPSLRF 301          
BLAST of EY662381 vs. ExPASy Swiss-Prot
Match: PTR3B_ARATH (Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.947e-21
Identity = 53/135 (39.26%), Postives = 75/135 (55.56%), Query Frame = 1
Query:    1 SSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIDHTDDFRY 405
            S+ GADQFDE     K H   FFN++  S+  G   A T++VY+Q   GW   +G   + +  S  +F +GT LYRH+LP GSP T++A+V+VA+ RK      SS+    YE+P    A K +  I  T   R+
Sbjct:  168 STIGADQFDEFDPKDKIHKHSFFNWWMFSIFFGTFFATTVLVYVQDNVGWAIGYGLSTLGLAFSIFIFLLGTRLYRHKLPMGSPFTKMARVIVASLRKAREPM-SSDSTRFYELPPMEYASKRAFPIHSTSSLRF 301          
BLAST of EY662381 vs. ExPASy Swiss-Prot
Match: CHL1_ARATH (Nitrate/chlorate transporter OS=Arabidopsis thaliana GN=CHL1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.369e-18
Identity = 52/138 (37.68%), Postives = 81/138 (58.70%), Query Frame = 1
Query:    1 SSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG--WGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSS--SELIGLYEVPGKHSAIKGSGKIDHTDDFR 402
            S FG+DQFDE     ++ +  FFN F+  + VG+++A T++VY+Q + G  WG    A AI + +S  +F  GT  YR +   GSP+T+VA V+VAA+R R     +  S L  + ++     ++KG  K+ HT+ FR
Sbjct:  168 SGFGSDQFDETEPKERSKMTYFFNRFFFCINVGSLLAVTVLVYVQDDVGRKWGYGICAFAIVLALS--VFLAGTNRYRFKKLIGSPMTQVAAVIVAAWRNRKLELPADPSYLYDVDDIIAAEGSMKGKQKLPHTEQFR 303          
BLAST of EY662381 vs. ExPASy Swiss-Prot
Match: PTR2X_ARATH (Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.772e-14
Identity = 41/99 (41.41%), Postives = 58/99 (58.59%), Query Frame = 1
Query:    4 SFGADQFDERSKDYKTH-LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKR 297
            +FGADQ D +        L+ FF ++Y S  V  ++AFT +VYIQ   GW   FG  A+ M I+ +LF + +PLY  R    S  T +AQ +VAA++KR
Sbjct:  164 AFGADQLDNKENPKNERVLESFFGWYYASSAVAVLIAFTGIVYIQEHLGWKIGFGVPAVLMLIAALLFILASPLYVTRGVTKSLFTGLAQAIVAAYKKR 262          
The following BLAST results are available for this feature:
BLAST of EY662381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
PTR2_ARATH2.841e-3249.63Peptide transporter PTR2 OS=Arabidopsis thaliana G... [more]
PTR1_ARATH7.736e-3048.89Peptide transporter PTR1 OS=Arabidopsis thaliana G... [more]
PTR5_ARATH8.851e-2646.15Peptide transporter PTR5 OS=Arabidopsis thaliana G... [more]
PTR3A_ARATH1.727e-2138.52Peptide transporter PTR3-A OS=Arabidopsis thaliana... [more]
PTR3B_ARATH2.947e-2139.26Peptide transporter PTR3-B OS=Arabidopsis thaliana... [more]
CHL1_ARATH1.369e-1837.68Nitrate/chlorate transporter OS=Arabidopsis thalia... [more]
PTR2X_ARATH7.772e-1441.41Probable peptide transporter At1g52190 OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-043-E06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662381 ID=EY662381; Name=EY662381; organism=Citrus sinensis; type=EST; length=430bp
TCTTCGTTTGGGGCTGATCAGTTTGATGAAAGGAGTAAAGATTACAAGAC
TCATCTGGATAGATTTTTCAACTTTTTCTATCTTTCTGTCACTGTTGGAG
CCATTGTGGCGTTTACTTTGGTGGTCTACATTCAAATGGAACATGGATGG
GGATCTGCTTTTGGTGCTTTGGCCATAGCCATGGGGATATCAAACATGTT
GTTTTTCATTGGCACTCCTTTGTACAGGCATAGGTTGCCAGGAGGCAGCC
CCTTAACAAGGGTTGCCCAGGTTCTAGTTGCTGCCTTTCGGAAGAGACAT
GCTGCTTTCTCTAGCAGTGAGTTAATCGGCCTATATGAGGTACCCGGTAA
ACATTCTGCTATAAAGGGTAGTGGAAAGATTGATCACACTGATGATTTCA
GGTATCACGGGCTCTCATTCTTTCATTTTA
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