CX046626

Overview
NameCX046626
Unique NameCX046626
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046626 vs. ExPASy Swiss-Prot
Match: U326_ARATH (UPF0326 protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.626e-47
Identity = 78/136 (57.35%), Postives = 102/136 (75.00%), Query Frame = 1
Query:  325 CLFPKAKSTSYSPGRAPVYLNVYDLTPMNGYVHWAGLGIYHSGVEVHGVEYAFGAHDYPTSGVFEVEPRLCPGFKFRKSIFIGTTCLDPIQVREFMERQSAHYNGDTYHLIVKNCNHFCKDICYKLTGKPIPKWVN 732
            C   +   +S      PVYLNVYDLTP+N Y++W G+GI+HSG+E H +EY +GAH+YPTSGV+EVEPR CPGF FR+S+ +GTT +     R +ME+ S  Y+GDTYHLI KNCNHF +++C +LTGKPIP W+N
Sbjct:   11 CSSDERDESSGEAALTPVYLNVYDLTPVNNYLYWFGIGIFHSGIEAHNLEYCYGAHEYPTSGVYEVEPRNCPGFIFRRSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPIPGWIN 146          
BLAST of CX046626 vs. ExPASy Swiss-Prot
Match: PPDE1_XENLA (PPPDE peptidase domain-containing protein 1 OS=Xenopus laevis GN=pppde1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.447e-26
Identity = 54/124 (43.55%), Postives = 78/124 (62.90%), Query Frame = 1
Query:  373 PVYLNVYDLTPMNGYVHWAGLGIYHSGVEVHGVEYAFGAHDYPTSGVFEVEP----RLCPGFKFRKSIFIGTTCLDPIQVREFMERQSAHYNGDTYHLIVKNCNHFCKDICYKLTGKPIPKWVN 732
            P+ LNVYD+  +N Y    G+G++HSG++V+G E+A+G H YP SGVFE+ P     L   FKF+++I +G+T      + + +E     Y G+ YHL+ KNCNHF   +   L GK IP+WVN
Sbjct:    5 PIILNVYDMYWINEYTSSLGIGVFHSGIQVYGREFAYGGHPYPFSGVFEISPGDSTELGDTFKFKEAIALGSTDFTENDIEKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVN 128          
BLAST of CX046626 vs. ExPASy Swiss-Prot
Match: PPDE1_DANRE (PPPDE peptidase domain-containing protein 1 OS=Danio rerio GN=pppde1 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.678e-26
Identity = 53/124 (42.74%), Postives = 77/124 (62.10%), Query Frame = 1
Query:  373 PVYLNVYDLTPMNGYVHWAGLGIYHSGVEVHGVEYAFGAHDYPTSGVFEVEP----RLCPGFKFRKSIFIGTTCLDPIQVREFMERQSAHYNGDTYHLIVKNCNHFCKDICYKLTGKPIPKWVN 732
            PV LNVYD+  +N +    G+G++HSG+E++G E+A+G H YP SG+FE+ P     L   FKF+++I +G+T      V   +E     Y G+ YHL+ KNCNHF   +   L G+ IP+WVN
Sbjct:    5 PVILNVYDMYWINEFTSSLGIGVFHSGIEIYGREFAYGGHPYPFSGIFEITPGDATELGETFKFKEAIVLGSTDFTEEDVERIVEEMGKEYKGNAYHLMHKNCNHFSSALSEILCGREIPRWVN 128          
BLAST of CX046626 vs. ExPASy Swiss-Prot
Match: PPDE1_RAT (PPPDE peptidase domain-containing protein 1 OS=Rattus norvegicus GN=Pppde1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.003e-25
Identity = 53/123 (43.09%), Postives = 77/123 (62.60%), Query Frame = 1
Query:  376 VYLNVYDLTPMNGYVHWAGLGIYHSGVEVHGVEYAFGAHDYPTSGVFEVEP----RLCPGFKFRKSIFIGTTCLDPIQVREFMERQSAHYNGDTYHLIVKNCNHFCKDICYKLTGKPIPKWVN 732
            V LNVYD+  MN Y    G+G++HSG+EV+G E+A+G H YP SG+FE+ P     L   FKF++++ +G+T      + + +E     Y G+ YHL+ KNCNHF   +   L GK IP+W+N
Sbjct:    7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNAAELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWIN 129          
BLAST of CX046626 vs. ExPASy Swiss-Prot
Match: PPDE1_PONAB (PPPDE peptidase domain-containing protein 1 OS=Pongo abelii GN=PPPDE1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.003e-25
Identity = 53/123 (43.09%), Postives = 77/123 (62.60%), Query Frame = 1
Query:  376 VYLNVYDLTPMNGYVHWAGLGIYHSGVEVHGVEYAFGAHDYPTSGVFEVEP----RLCPGFKFRKSIFIGTTCLDPIQVREFMERQSAHYNGDTYHLIVKNCNHFCKDICYKLTGKPIPKWVN 732
            V LNVYD+  MN Y    G+G++HSG+EV+G E+A+G H YP SG+FE+ P     L   FKF++++ +G+T      + + +E     Y G+ YHL+ KNCNHF   +   L GK IP+W+N
Sbjct:    7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWIN 129          
BLAST of CX046626 vs. ExPASy Swiss-Prot
Match: PPDE1_PIG (PPPDE peptidase domain-containing protein 1 OS=Sus scrofa GN=PPPDE1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.003e-25
Identity = 53/123 (43.09%), Postives = 77/123 (62.60%), Query Frame = 1
Query:  376 VYLNVYDLTPMNGYVHWAGLGIYHSGVEVHGVEYAFGAHDYPTSGVFEVEP----RLCPGFKFRKSIFIGTTCLDPIQVREFMERQSAHYNGDTYHLIVKNCNHFCKDICYKLTGKPIPKWVN 732
            V LNVYD+  MN Y    G+G++HSG+EV+G E+A+G H YP SG+FE+ P     L   FKF++++ +G+T      + + +E     Y G+ YHL+ KNCNHF   +   L GK IP+W+N
Sbjct:    7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWIN 129          
BLAST of CX046626 vs. ExPASy Swiss-Prot
Match: PPDE1_MOUSE (PPPDE peptidase domain-containing protein 1 OS=Mus musculus GN=Pppde1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.003e-25
Identity = 53/123 (43.09%), Postives = 77/123 (62.60%), Query Frame = 1
Query:  376 VYLNVYDLTPMNGYVHWAGLGIYHSGVEVHGVEYAFGAHDYPTSGVFEVEP----RLCPGFKFRKSIFIGTTCLDPIQVREFMERQSAHYNGDTYHLIVKNCNHFCKDICYKLTGKPIPKWVN 732
            V LNVYD+  MN Y    G+G++HSG+EV+G E+A+G H YP SG+FE+ P     L   FKF++++ +G+T      + + +E     Y G+ YHL+ KNCNHF   +   L GK IP+W+N
Sbjct:    7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWIN 129          
BLAST of CX046626 vs. ExPASy Swiss-Prot
Match: PPDE1_HUMAN (PPPDE peptidase domain-containing protein 1 OS=Homo sapiens GN=PPPDE1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.003e-25
Identity = 53/123 (43.09%), Postives = 77/123 (62.60%), Query Frame = 1
Query:  376 VYLNVYDLTPMNGYVHWAGLGIYHSGVEVHGVEYAFGAHDYPTSGVFEVEP----RLCPGFKFRKSIFIGTTCLDPIQVREFMERQSAHYNGDTYHLIVKNCNHFCKDICYKLTGKPIPKWVN 732
            V LNVYD+  MN Y    G+G++HSG+EV+G E+A+G H YP SG+FE+ P     L   FKF++++ +G+T      + + +E     Y G+ YHL+ KNCNHF   +   L GK IP+W+N
Sbjct:    7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWIN 129          
BLAST of CX046626 vs. ExPASy Swiss-Prot
Match: PPDE1_CHICK (PPPDE peptidase domain-containing protein 1 OS=Gallus gallus GN=PPPDE1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.710e-25
Identity = 53/123 (43.09%), Postives = 77/123 (62.60%), Query Frame = 1
Query:  376 VYLNVYDLTPMNGYVHWAGLGIYHSGVEVHGVEYAFGAHDYPTSGVFEVEP----RLCPGFKFRKSIFIGTTCLDPIQVREFMERQSAHYNGDTYHLIVKNCNHFCKDICYKLTGKPIPKWVN 732
            V LNVYD+  MN Y    G+G++HSG+EV+G E+A+G H YP SG+FE+ P     L   FKF++++ +G+T      + + +E     + G+ YHL+ KNCNHF   +   L GK IP+WVN
Sbjct:    6 VILNVYDMYWMNEYTSSLGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFMEDDIEKIVEELGKEFKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVN 128          
BLAST of CX046626 vs. ExPASy Swiss-Prot
Match: HAG1_SCHPO (UPF0326 protein hag1 OS=Schizosaccharomyces pombe GN=hag1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.330e-19
Identity = 54/124 (43.55%), Postives = 72/124 (58.06%), Query Frame = 1
Query:  376 VYLNVYDL---TPMNGYVHWAGLGIYHSGVEVHGVEYAFGAHDYPTS-GVFEVEPRL-CPGFKFRKSIFIGTTCLDPIQVREFMERQSAHYNGDTYHLIVKNCNHFCKDICYKLTGKPIPKWVN 732
            VY+NVYDL   +P+N      GLGIYH+G+ + G EYAFGAH+ P S GVF   PR    G ++R SI +    L    V   + R S  + G +Y L+ +NCNHF      +LTG PIP ++N
Sbjct:    3 VYINVYDLMPDSPVNKLAWTLGLGIYHTGLVLEGKEYAFGAHEIPGSTGVFATMPRPPLEGCRWRCSIALPNCTLPKPDVDRILIRLSQEFTGLSYSLLERNCNHFTNAAAIELTGSPIPSFLN 126          
The following BLAST results are available for this feature:
BLAST of CX046626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
U326_ARATH4.626e-4757.35UPF0326 protein At4g17486 OS=Arabidopsis thaliana ... [more]
PPDE1_XENLA3.447e-2643.55PPPDE peptidase domain-containing protein 1 OS=Xen... [more]
PPDE1_DANRE7.678e-2642.74PPPDE peptidase domain-containing protein 1 OS=Dan... [more]
PPDE1_RAT1.003e-2543.09PPPDE peptidase domain-containing protein 1 OS=Rat... [more]
PPDE1_PONAB1.003e-2543.09PPPDE peptidase domain-containing protein 1 OS=Pon... [more]
PPDE1_PIG1.003e-2543.09PPPDE peptidase domain-containing protein 1 OS=Sus... [more]
PPDE1_MOUSE1.003e-2543.09PPPDE peptidase domain-containing protein 1 OS=Mus... [more]
PPDE1_HUMAN1.003e-2543.09PPPDE peptidase domain-containing protein 1 OS=Hom... [more]
PPDE1_CHICK1.710e-2543.09PPPDE peptidase domain-containing protein 1 OS=Gal... [more]
HAG1_SCHPO5.330e-1943.55UPF0326 protein hag1 OS=Schizosaccharomyces pombe ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_9C01_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-9C01-F1-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046626 ID=CX046626; Name=CX046626; organism=Citrus sinensis; type=EST; length=733bp
GATAAAGAGCAAGTACAAAAAGCTCTTTAAGCAATTAGCTTTCCTCTTCA
AGCAATTAGCTTTCCTCTTTGACTGCTAAATTTGAGATATTTTCGCCTGT
TGCCTGAACTGGGAAATGGGAACAATTAGGCCTTAGCTGTAGGTAGACGG
TTTGTTTTAAACAACATGGAAGTTCAAATCAATGTCCATCCACTCTAAAT
CTGTTGGACACGGGGCCTGATTGAATTCTGGTCTTTCAATTGCACAAAAA
TGAAATTTGGATCAAAGAAAGTTTGGAAATCAGTAGTGCCCCTTCGCTTG
AAAGGCAAATCAGCAACACGTTTTTGTCTGTTCCCCAAAGCAAAGTCAAC
TAGCTATAGTCCAGGTCGAGCACCAGTTTATCTCAATGTGTATGACTTGA
CACCAATGAATGGCTATGTCCACTGGGCAGGCCTCGGTATCTATCACTCT
GGTGTGGAAGTCCATGGTGTAGAATATGCATTTGGAGCTCATGACTACCC
AACAAGTGGCGTTTTTGAGGTTGAACCACGGCTGTGCCCAGGCTTCAAGT
TCAGGAAATCAATATTCATTGGGACCACATGCTTGGACCCTATTCAGGTT
AGAGAGTTCATGGAGAGACAATCTGCACACTATAATGGTGATACATATCA
CTTGATTGTTAAGAATTGCAATCATTTCTGCAAGGACATTTGTTATAAGC
TAACCGGGAAGCCAATTCCAAAATGGGTGAATC
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