CX046624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046624 vs. ExPASy Swiss-Prot
Match: CSN5B_ARATH (COP9 signalosome complex subunit 5b OS=Arabidopsis thaliana GN=CSN5B PE=1 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 1.001e-48 Identity = 101/123 (82.11%), Postives = 109/123 (88.62%), Query Frame = -1 Query: 446 SSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLI-APPPRRKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSTKTHAEPSDPEPMIES 811 SSLD HLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAE+QL++SRYG + A RRKE++ QLAKITRDSAKITVEQVHGLMSQVIKDILFNS RQS K+ + SDPEPMI S Sbjct: 235 SSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAESQLANSRYGGIAPAGHQRRKEDEPQLAKITRDSAKITVEQVHGLMSQVIKDILFNSARQSKKSADDSSDPEPMITS 357
BLAST of CX046624 vs. ExPASy Swiss-Prot
Match: CSN5A_ARATH (COP9 signalosome complex subunit 5a OS=Arabidopsis thaliana GN=CSN5A PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.352e-44 Identity = 93/122 (76.23%), Postives = 106/122 (86.89%), Query Frame = -1 Query: 452 SSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLI-APPPRRKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS-TKTHAEPSDPEPMI 811 SSLD HLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAE+ L SR+G ++ + ++KE++SQL KITRDSAKITVEQVHGLMSQVIKD LFNS+RQS K+ + SDP+PMI Sbjct: 235 SSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAESHLVQSRFGGVVPSSLHKKKEDESQLTKITRDSAKITVEQVHGLMSQVIKDELFNSMRQSNNKSPTDSSDPDPMI 356
BLAST of CX046624 vs. ExPASy Swiss-Prot
Match: CSN5_DICDI (COP9 signalosome complex subunit 5 OS=Dictyostelium discoideum GN=csn5 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.028e-29 Identity = 66/108 (61.11%), Postives = 84/108 (77.78%), Query Frame = -1 Query: 488 SSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPRRKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSTK 811 SSLD LLD LWNKYWVNTLSSSP+ N DY+ GQI+DL+EKLEQAE QLSHSR L +K+E+S L+K+++DS+K+T+EQV G+MSQV K+ +FN Q+TK Sbjct: 230 SSLDQQLLDKLWNKYWVNTLSSSPIFSNRDYITGQINDLSEKLEQAETQLSHSRSSIL-----DKKKEESLLSKVSKDSSKVTIEQVQGIMSQVFKNSIFNEC-QTTK 331
BLAST of CX046624 vs. ExPASy Swiss-Prot
Match: CSN5_DANRE (COP9 signalosome complex subunit 5 OS=Danio rerio GN=cops5 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.834e-27 Identity = 63/106 (59.43%), Postives = 75/106 (70.75%), Query Frame = -1 Query: 494 SSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPRRKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS 811 SSLD LL+LLWNKYWVNTLSSS LL N DY GQ+ DL+EKLEQAE QL + ++ ++ + +LAK TRDS K T+E +HGLMSQVIKD LFN V S Sbjct: 229 SSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQAEAQLGRGSF--MLGLDTHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQVNTS 332
BLAST of CX046624 vs. ExPASy Swiss-Prot
Match: CSN5_HUMAN (COP9 signalosome complex subunit 5 OS=Homo sapiens GN=COPS5 PE=1 SV=4) HSP 1 Score: 119.398 bits (298), Expect = 2.399e-26 Identity = 61/106 (57.55%), Postives = 75/106 (70.75%), Query Frame = -1 Query: 494 SSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPRRKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS 811 SSLD LL+LLWNKYWVNTLSSS LL N DY GQ+ DL+EKLEQ+E QL + ++ ++ + +LAK TRDS K T+E +HGLMSQVIKD LFN + S Sbjct: 231 SSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSF--MLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQINIS 334
BLAST of CX046624 vs. ExPASy Swiss-Prot
Match: CSN5_XENTR (COP9 signalosome complex subunit 5 OS=Xenopus tropicalis GN=cops5 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.133e-26 Identity = 60/103 (58.25%), Postives = 74/103 (71.84%), Query Frame = -1 Query: 503 SSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPRRKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 811 SSLD LL+LLWNKYWVNTLSSS LL N DY GQ+ DL+EKLEQ+E QL + ++ ++ + +LAK TRDS K T+E +HGLMSQVIKD LFN + Sbjct: 231 SSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSF--MLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQI 331
BLAST of CX046624 vs. ExPASy Swiss-Prot
Match: CSN5_MOUSE (COP9 signalosome complex subunit 5 OS=Mus musculus GN=Cops5 PE=1 SV=3) HSP 1 Score: 119.013 bits (297), Expect = 3.133e-26 Identity = 60/103 (58.25%), Postives = 74/103 (71.84%), Query Frame = -1 Query: 503 SSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPRRKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 811 SSLD LL+LLWNKYWVNTLSSS LL N DY GQ+ DL+EKLEQ+E QL + ++ ++ + +LAK TRDS K T+E +HGLMSQVIKD LFN + Sbjct: 231 SSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSF--MLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQI 331
BLAST of CX046624 vs. ExPASy Swiss-Prot
Match: CSN5_XENLA (COP9 signalosome complex subunit 5 OS=Xenopus laevis GN=cops5 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.116e-26 Identity = 59/103 (57.28%), Postives = 74/103 (71.84%), Query Frame = -1 Query: 503 SSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPRRKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 811 SSLD LL+LLWNKYWVNTLSSS LL N +Y GQ+ DL+EKLEQ+E QL + ++ ++ + +LAK TRDS K T+E +HGLMSQVIKD LFN + Sbjct: 229 SSLDRKLLELLWNKYWVNTLSSSSLLTNAEYTTGQVFDLSEKLEQSEAQLGRGSF--MLGLESHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQI 329
BLAST of CX046624 vs. ExPASy Swiss-Prot
Match: CSN5_DROME (COP9 signalosome complex subunit 5 OS=Drosophila melanogaster GN=CSN5 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.585e-22 Identity = 54/103 (52.43%), Postives = 68/103 (66.02%), Query Frame = -1 Query: 503 SSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPRRKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 811 S+LD LLD LWNKYWVNTL SS LL N +Y GQI DL+EKLEQ+EN L K + +L+K TRD ++ T+E +HGLM+Q++KD LFN V Sbjct: 228 SALDRRLLDSLWNKYWVNTLGSSGLLTNTEYTTGQIMDLSEKLEQSENFLGR-------GTDVNEKRSEDKLSKATRDCSRSTIELIHGLMAQIVKDKLFNKV 323
BLAST of CX046624 vs. ExPASy Swiss-Prot
Match: CSN5_ASPFU (COP9 signalosome complex subunit 5 OS=Aspergillus fumigatus GN=csn5 PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 9.456e-15 Identity = 50/113 (44.25%), Postives = 66/113 (58.41%), Query Frame = -1 Query: 479 SSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAEN--QLSHSRYGPLIAPPPRRKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSTKTHA 811 SSLD LL LWNKYWV TLS SPL DY + Q+ DL++K+ +A + S SR G A P+ D QL KI RD +I E+V GL++ +K LF + + T+T A Sbjct: 228 SSLDTELLSQLWNKYWVATLSQSPLFTTRDYGSRQMMDLSQKVRRAARGIESSGSRGG---ATTPK----DQQLEKIVRDGQRIVSEEVKGLLAAEVKMKLFQGIGEGTQTGA 333 The following BLAST results are available for this feature:
BLAST of CX046624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046624 ID=CX046624; Name=CX046624; organism=Citrus sinensis; type=EST; length=811bpback to top |