EY662379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY662379 vs. ExPASy Swiss-Prot
Match: PSBW_SPIOL (Photosystem II reaction center W protein, chloroplastic OS=Spinacia oleracea GN=psbW PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.120e-29 Identity = 69/124 (55.65%), Postives = 77/124 (62.10%), Query Frame = 1 Query: 49 MAAITASVGTSSITRSVLVHKPSIVASSSPVLGLPAMAVKGKVRCSMEEKPSKQESKT--NVGXXXXXXXXXXXXXXXXXXXXLVDERMSTEGTGLPFGLSNNLLGWILLGVFGLIWALYIPYA 414 MA ITAS S + R+ LVH + SSSP+LGLP+M + KV CS+E KPS E+ T N LVDERMSTEGTGLPFGLSNNLLGWIL GVFGLIWALY YA Sbjct: 1 MATITASSSASLVARASLVHNSRVGVSSSPILGLPSMTKRSKVTCSIENKPSTTETTTTTNKSMGASLLAAAAAATISNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYA 124
BLAST of EY662379 vs. ExPASy Swiss-Prot
Match: PSBW_ARATH (Photosystem II reaction center W protein, chloroplastic OS=Arabidopsis thaliana GN=PSBW PE=1 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22 Identity = 66/123 (53.66%), Postives = 75/123 (60.98%), Query Frame = 1 Query: 49 MAAITASVGTSSITRSVLVHKPSIVASSSPVLGLPAMAVK-GKVRCSMEEKPSKQESKTNVGXXXXXXXXXXXXXXXXXXXX-LVDERMSTEGTGLPFGLSNNLLGWILLGVFGLIWALYIPY 411 MA+ TAS T S R L+ KP+ VA S+PVLGLP M K G VRCSME +KQ + + +G LVDERMSTEGTGLPFGLSNNLLGWIL GVFGLIW + Y Sbjct: 1 MASFTASASTVSAARPALLLKPT-VAISAPVLGLPPMGKKKGGVRCSME---TKQGNVSVMGAGVSAAATAALTAVMSNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFVY 119
BLAST of EY662379 vs. ExPASy Swiss-Prot
Match: PSBW_ORYSJ (Photosystem II reaction center W protein, chloroplastic OS=Oryza sativa subsp. japonica GN=PSBW PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.164e-15 Identity = 53/123 (43.09%), Postives = 64/123 (52.03%), Query Frame = 1 Query: 49 MAAITASVGTSSITRSVLVHKPSIVASSSPVLGLPAMAVKG--KVRCSMEEKPSKQESKTNVGXXXXXXXXXXXXXXXXXXXXLVDERMSTEGTGLPFGLSNNLLGWILLGVFGLIWALYIPY 411 MA ++A+ TS + R+VL LGLP M + +VRC+ SK+ + LVDERMSTEGTGL GLSNNLLGWILLGVFGLIW+LY Y Sbjct: 1 MATVSAAAATSVVARAVLAGP----------LGLPQMRARRSERVRCNY----SKEAATPAAAVKGAGASLLAMAATAAPAMALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIY 109 The following BLAST results are available for this feature:
BLAST of EY662379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY662379 ID=EY662379; Name=EY662379; organism=Citrus sinensis; type=EST; length=545bpback to top |