CX046622 | Citrus Genome Database

Overview


Name	CX046622
Unique Name	CX046622
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	820

Libraries


Library Name	Type
Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CX046622 vs. ExPASy Swiss-Prot
Match: TBA_PRUDU (Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 SV=1)

HSP 1 Score: 465.307 bits (1196), Expect = 2.839e-137
Identity = 230/232 (99.14%), Postives = 231/232 (99.57%), Query Frame = 2

Query:   71 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISSEKAYHEQLSFAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 766
            DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVIS+EKAYHEQLS AEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI
Sbjct:  160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 391

HSP 2 Score: 43.5134 bits (101), Expect = 2.839e-137
Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3

Query:  768 DHKFDLMYAKRAFVHWY 818
            DHKFDLMYAKRAFVHWY
Sbjct:  392 DHKFDLMYAKRAFVHWY 408

[Close]

BLAST of CX046622 vs. ExPASy Swiss-Prot
Match: TBA1_PEA (Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1 PE=3 SV=1)

HSP 1 Score: 465.307 bits (1196), Expect = 2.839e-137
Identity = 230/232 (99.14%), Postives = 231/232 (99.57%), Query Frame = 2

Query:   71 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISSEKAYHEQLSFAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 766
            DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVIS+EKAYHEQLS AEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI
Sbjct:  160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 391

HSP 2 Score: 43.5134 bits (101), Expect = 2.839e-137
Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3

Query:  768 DHKFDLMYAKRAFVHWY 818
            DHKFDLMYAKRAFVHWY
Sbjct:  392 DHKFDLMYAKRAFVHWY 408

[Close]

BLAST of CX046622 vs. ExPASy Swiss-Prot
Match: TBA4_GOSHI (Tubulin alpha-4 chain OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 465.307 bits (1196), Expect = 8.234e-137
Identity = 230/232 (99.14%), Postives = 231/232 (99.57%), Query Frame = 2

Query:   71 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISSEKAYHEQLSFAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 766
            DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVIS+EKAYHEQLS AEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI
Sbjct:  160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 391

HSP 2 Score: 41.9726 bits (97), Expect = 8.234e-137
Identity = 16/17 (94.12%), Postives = 16/17 (94.12%), Query Frame = 3

Query:  768 DHKFDLMYAKRAFVHWY 818
            DHKFDLMY KRAFVHWY
Sbjct:  392 DHKFDLMYTKRAFVHWY 408

[Close]

BLAST of CX046622 vs. ExPASy Swiss-Prot
Match: TBA2_GOSHI (Tubulin alpha-2 chain OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 463.766 bits (1192), Expect = 1.075e-136
Identity = 229/232 (98.71%), Postives = 231/232 (99.57%), Query Frame = 2

Query:   71 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISSEKAYHEQLSFAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 766
            DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVIS+EKAYHEQLS AEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA+IKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI
Sbjct:  160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 391

HSP 2 Score: 43.1282 bits (100), Expect = 1.075e-136
Identity = 16/17 (94.12%), Postives = 17/17 (100.00%), Query Frame = 3

Query:  768 DHKFDLMYAKRAFVHWY 818
            DHKFDLMYAKRAF+HWY
Sbjct:  392 DHKFDLMYAKRAFIHWY 408

[Close]

BLAST of CX046622 vs. ExPASy Swiss-Prot
Match: TBA1_ANEPH (Tubulin alpha-1 chain OS=Anemia phyllitidis GN=TUBA1 PE=2 SV=1)

HSP 1 Score: 462.996 bits (1190), Expect = 1.402e-136
Identity = 228/232 (98.28%), Postives = 231/232 (99.57%), Query Frame = 2

Query:   71 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISSEKAYHEQLSFAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 766
            DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVIS+EKAYHEQLS AEITNSAFEP+SMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI
Sbjct:  160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 391

HSP 2 Score: 43.5134 bits (101), Expect = 1.402e-136
Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3

Query:  768 DHKFDLMYAKRAFVHWY 818
            DHKFDLMYAKRAFVHWY
Sbjct:  392 DHKFDLMYAKRAFVHWY 408

[Close]

BLAST of CX046622 vs. ExPASy Swiss-Prot
Match: TBA1_GOSHI (Tubulin alpha-1 chain OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 461.07 bits (1185), Expect = 5.307e-136
Identity = 227/232 (97.84%), Postives = 230/232 (99.14%), Query Frame = 2

Query:   71 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISSEKAYHEQLSFAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 766
            DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEF+TNLVPYPRIHFMLSSYAPVIS+EKAYHEQLS AEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQF DWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI
Sbjct:  160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFRTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFADWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 391

HSP 2 Score: 43.5134 bits (101), Expect = 5.307e-136
Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3

Query:  768 DHKFDLMYAKRAFVHWY 818
            DHKFDLMYAKRAFVHWY
Sbjct:  392 DHKFDLMYAKRAFVHWY 408

[Close]

BLAST of CX046622 vs. ExPASy Swiss-Prot
Match: TBA3_HORVU (Tubulin alpha-3 chain OS=Hordeum vulgare GN=TUBA3 PE=2 SV=1)

HSP 1 Score: 460.299 bits (1183), Expect = 9.039e-136
Identity = 227/232 (97.84%), Postives = 229/232 (98.71%), Query Frame = 2

Query:   71 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISSEKAYHEQLSFAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 766
            DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV EFQTNLVPYPRIHFMLSSYAPVIS+EKAYHEQLS AEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP+VVPGGDLAKVQRAVCMISNSTSV EVFSRI
Sbjct:  160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRI 391

HSP 2 Score: 43.5134 bits (101), Expect = 9.039e-136
Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3

Query:  768 DHKFDLMYAKRAFVHWY 818
            DHKFDLMYAKRAFVHWY
Sbjct:  392 DHKFDLMYAKRAFVHWY 408

[Close]

BLAST of CX046622 vs. ExPASy Swiss-Prot
Match: TBA1_ELEIN (Tubulin alpha-1 chain OS=Eleusine indica GN=TUBA1 PE=2 SV=1)

HSP 1 Score: 460.299 bits (1183), Expect = 9.039e-136
Identity = 227/232 (97.84%), Postives = 229/232 (98.71%), Query Frame = 2

Query:   71 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISSEKAYHEQLSFAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 766
            DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV EFQTNLVPYPRIHFMLSSYAPVIS+EKAYHEQLS AEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP+VVPGGDLAKVQRAVCMISNSTSV EVFSRI
Sbjct:  160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRI 391

HSP 2 Score: 43.5134 bits (101), Expect = 9.039e-136
Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3

Query:  768 DHKFDLMYAKRAFVHWY 818
            DHKFDLMYAKRAFVHWY
Sbjct:  392 DHKFDLMYAKRAFVHWY 408

[Close]

BLAST of CX046622 vs. ExPASy Swiss-Prot
Match: TBA2_MAIZE (Tubulin alpha-2 chain OS=Zea mays GN=TUBA2 PE=3 SV=1)

HSP 1 Score: 459.914 bits (1182), Expect = 1.180e-135
Identity = 226/232 (97.41%), Postives = 229/232 (98.71%), Query Frame = 2

Query:   71 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISSEKAYHEQLSFAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 766
            DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVA+LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV EFQTNLVPYPRIHFMLSSYAPVIS+EKAYHEQLS AEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP+VVPGGDLAKVQRAVCMISNSTSV EVFSRI
Sbjct:  160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAILLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRI 391

HSP 2 Score: 43.5134 bits (101), Expect = 1.180e-135
Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3

Query:  768 DHKFDLMYAKRAFVHWY 818
            DHKFDLMYAKRAFVHWY
Sbjct:  392 DHKFDLMYAKRAFVHWY 408

[Close]

BLAST of CX046622 vs. ExPASy Swiss-Prot
Match: TBA1_MAIZE (Tubulin alpha-1 chain OS=Zea mays GN=TUBA1 PE=3 SV=1)

HSP 1 Score: 459.914 bits (1182), Expect = 1.180e-135
Identity = 226/232 (97.41%), Postives = 229/232 (98.71%), Query Frame = 2

Query:   71 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISSEKAYHEQLSFAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI 766
            DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVA+LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV EFQTNLVPYPRIHFMLSSYAPVIS+EKAYHEQLS AEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP+VVPGGDLAKVQRAVCMISNSTSV EVFSRI
Sbjct:  160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAILLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRI 391

HSP 2 Score: 43.5134 bits (101), Expect = 1.180e-135
Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3

Query:  768 DHKFDLMYAKRAFVHWY 818
            DHKFDLMYAKRAFVHWY
Sbjct:  392 DHKFDLMYAKRAFVHWY 408

The following BLAST results are available for this feature:

BLAST of CX046622 vs. ExPASy Swiss-Prot

BLAST of CX046622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 419


Match Name	E-value	Identity	Description
TBA_PRUDU	2.839e-137	99.14	Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 ...	[more]
TBA1_PEA	2.839e-137	99.14	Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1 PE...	[more]
TBA4_GOSHI	8.234e-137	99.14	Tubulin alpha-4 chain OS=Gossypium hirsutum PE=2 S...	[more]
TBA2_GOSHI	1.075e-136	98.71	Tubulin alpha-2 chain OS=Gossypium hirsutum PE=2 S...	[more]
TBA1_ANEPH	1.402e-136	98.28	Tubulin alpha-1 chain OS=Anemia phyllitidis GN=TUB...	[more]
TBA1_GOSHI	5.307e-136	97.84	Tubulin alpha-1 chain OS=Gossypium hirsutum PE=2 S...	[more]
TBA3_HORVU	9.039e-136	97.84	Tubulin alpha-3 chain OS=Hordeum vulgare GN=TUBA3 ...	[more]
TBA1_ELEIN	9.039e-136	97.84	Tubulin alpha-1 chain OS=Eleusine indica GN=TUBA1 ...	[more]
TBA2_MAIZE	1.180e-135	97.41	Tubulin alpha-2 chain OS=Zea mays GN=TUBA2 PE=3 SV...	[more]
TBA1_MAIZE	1.180e-135	97.41	Tubulin alpha-1 chain OS=Zea mays GN=TUBA1 PE=3 SV...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS07_9B10_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-9B10-D19-1-7.b, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX046622 ID=CX046622; Name=CX046622; organism=Citrus sinensis; type=EST; length=820bp
TGTTTTCATGCTGTTGGTGGACGTATTTGGCTCTGGTCTTGGGTCTCTTC
TTCTGGAGAGGTTGTCTGTTGACTATGGAAAGAAGTCAAAGTTGGGCTTC
ACTGTCTACCCATCTCCTCAGGTCTCCACATCTGTTGTTGAGCCTTACAA
CAGTGTCCTCTCAACCCACTCCCTGTTGGAGCATACTGATGTGGCTGTTC
TTCTCGACAATGAGGCCATTTATGACATCTGCAGGCGCTCCCTTGACATT
GAACGTCCTACCTATACTAACCTCAATAGACTTGTTTCTCAGGTAATTTC
TTCATTGACTGCCTCACTGAGGTTTGATGGTGCTTTGAATGTGGATGTGA
CTGAATTCCAAACCAACTTGGTCCCATACCCAAGAATCCACTTCATGCTT
TCCTCCTATGCACCAGTCATCTCATCTGAGAAGGCCTACCATGAACAACT
CTCATTTGCTGAGATCACCAACAGTGCCTTTGAGCCCTCATCTATGATGG
CCAAATGTGATCCTCGTCATGGCAAGTACATGGCTTGCTGCCTTATGTAC
CGCGGTGATGTTGTGCCCAAGGATGTCAATGCAGCTGTTGCTACCATCAA
GACCAAGCGTACAATCCAATTCGTCGACTGGTGCCCGACTGGGTTCAAGT
GTGGTATCAACTACCAGCCACCAACTGTTGTTCCTGGTGGTGACCTTGCC
AAGGTGCAGAGGGCTGTTTGCATGATCTCCAACTCCACCAGTGTGGCAGA
GGTGTTCTCTCGCATTTGACCACAAGTTTGATCTTATGTATGCAAAGCGT
GCTTTCGTCCACTGGTATGT