CX046619 | Citrus Genome Database

Overview


Name	CX046619
Unique Name	CX046619
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	688

Libraries


Library Name	Type
Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
CX046619_ssr196	microsatellite	CX046619_ssr196:196..210.	BLAST: Citrus ESTs to Prunus persica proteins V1
CX046619_ssr462	microsatellite	CX046619_ssr462:462..476.	BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1769	contig	Csv1_Contig1769:32..719.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Properties


Property Name	Value
Genbank description	UCRCS07_9B08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-9B08-D15-1-6.g, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX046619 ID=CX046619; Name=CX046619; organism=Citrus sinensis; type=EST; length=688bp
GTCACTTATTTCCTCTCGTCTGACAATTGAGTCATCGGAGTAATGTCGGG
AACGGGCGATTCATCCGCCGTCAACGGCGGTGGCTGCGAGATTATGCTGT
TCGGTGTCAGAGTGGTTGTGGATTCCATGAGAAAGAGTGTCAGTTTGAAT
AATTTGTCTCAGTATGAACAGCCTCAGGACAACAGCAGTAACTGTAACAA
CAACAACAACAAGGATGACGTGGCGGCTGCTGGTTACGCCTCTGCTGATG
ATGGCGTTCACAACAACTCTTCCAGAGCTAGCCGCGAGCGGAAGCGAGGG
GTGCCGTGGACGGAGGAGGAGCACAAGTTGTTTTTGTTGGGACTGCAGAA
GGTGGGGAAAGGAGATTGGAGAGGGATTTCTAGAAACTTCGTCAAGACGA
GGACGCCGACGCAGGTGGCCAGTCATGCGCAGAAATATTTTCTTCGCCGG
AGCAATCTCAACCGCCGCCGCCGCCGATCTAGCCTCTTTGATATTACTAC
TGATTCGGTTGCAGCTACTCCAATGGAAGAAGAGCTAGTTGATCACCAAG
ACCACAACCCTTCTCAGTCATATCCATTATTGCCGCCTACTCCGGCTGAA
ACCAGCAACAAAAGTGGTGGATTTTCTATGATGCCAGCTTTGCCAGTAAT
GTTACCGGTTCCAATTGAAAATCCAATGGAAAAACCTG