CX046616
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_MEDTR (Eukaryotic translation initiation factor 3 subunit C OS=Medicago truncatula GN=TIF3C1 PE=2 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 2.055e-77 Identity = 139/170 (81.76%), Postives = 154/170 (90.59%), Query Frame = -1 Query: 1 RGPSAFISVPELVPRKPTFPENSRTMMDMLVSLIYKYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 510 R P+ F+ ELV RKPTFPENSRT+MD+LVSLIYKYGDERTKARAMLCDIYHHALLDEF+ ARDLLLMSHLQ+NV MD+ +QILFNRAM+QLGLCAFR G+ +E H CLSELYSGG+VKELLAQG+SQSRYHEKTPEQERLERRRQMPYHMHINLELLE+VHL A+L Sbjct: 474 RIPAPFVVTLELVARKPTFPENSRTLMDVLVSLIYKYGDERTKARAMLCDIYHHALLDEFAVARDLLLMSHLQENVHHMDISTQILFNRAMSQLGLCAFRAGLVSEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLESVHLTSAML 643
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_ARATH (Eukaryotic translation initiation factor 3 subunit C OS=Arabidopsis thaliana GN=TIF3C1 PE=1 SV=2) HSP 1 Score: 286.189 bits (731), Expect = 5.980e-77 Identity = 137/168 (81.55%), Postives = 153/168 (91.07%), Query Frame = -1 Query: 1 PSAFISVPELVPRKPTFPENSRTMMDMLVSLIYKYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 504 P++FI VPE+VPRKPTFPE+SR MMD+LVSLIY+ GDERTKARAMLCDI HHAL+D F TARDLLLMSHLQDN+Q MD+ +QILFNR MAQLGLCAFR GM E HSCLSELYSG +V+ELLAQG+SQSRYHEKTPEQER+ERRRQMPYHMH+NLELLEAVHL CA+L Sbjct: 456 PTSFIVVPEVVPRKPTFPESSRAMMDILVSLIYRNGDERTKARAMLCDINHHALMDNFVTARDLLLMSHLQDNIQHMDISTQILFNRTMAQLGLCAFRAGMITESHSCLSELYSGQRVRELLAQGVSQSRYHEKTPEQERMERRRQMPYHMHLNLELLEAVHLICAML 623
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_BOTFB (Eukaryotic translation initiation factor 3 subunit C OS=Botryotinia fuckeliana (strain B05.10) GN=nip1 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.065e-41 Identity = 81/152 (53.29%), Postives = 113/152 (74.34%), Query Frame = -1 Query: 1 ENSRTMMDMLVSLIY--KYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 450 E+++T++++L + +Y G+ TKARAMLC IY AL D + ARD++LMSHLQ+ + DV SQILFNR + Q+GLCAFR G+ E + L E+ G+ KELLAQG+ RY++ TP+QERLE++RQ+P+HMHINLELLE V+L C++L Sbjct: 475 EDAKTLVNVLCNYLYINTEGEGLTKARAMLCQIYFEALHDNYYKARDMMLMSHLQETINSFDVHSQILFNRTLVQVGLCAFRAGLVYEAQTTLQEICGSGRQKELLAQGVMIQRYNQVTPDQERLEKQRQLPFHMHINLELLECVYLTCSML 626
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_SCLS1 (Eukaryotic translation initiation factor 3 subunit C OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=nip1 PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 2.373e-41 Identity = 80/152 (52.63%), Postives = 113/152 (74.34%), Query Frame = -1 Query: 1 ENSRTMMDMLVSLIY--KYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 450 ++++T++++L + +Y G+ TKARAMLC IY AL D + ARD++LMSHLQ+ + DV SQILFNR + Q+GLCAFR G+ E + L E+ G+ KELLAQG+ RY++ TP+QERLE++RQ+P+HMHINLELLE V+L C++L Sbjct: 476 QDAKTLVNILCNYLYINTEGEGLTKARAMLCQIYFEALHDNYYKARDMMLMSHLQETINSFDVHSQILFNRTLVQVGLCAFRAGLVYEAQTTLQEICGSGRQKELLAQGVMIQRYNQVTPDQERLEKQRQLPFHMHINLELLECVYLTCSML 627
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_DROSE (Eukaryotic translation initiation factor 3 subunit C OS=Drosophila sechellia GN=eIF3-S8 PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 3.427e-40 Identity = 86/166 (51.81%), Postives = 112/166 (67.47%), Query Frame = -1 Query: 1 PELVPRK----PTFPENSRTMMDMLVSLIYKYGD-ERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 483 PE++ +K P S +MD L IY D +R + RA+L IYHHA+ D + ARDL+LMSHLQDN+ D ++IL+NR MA LGLCAFR G + H CL +L GK KELLAQG+ R HE++ EQE++E++RQMP+HMHINLELLE V+L A+L Sbjct: 493 PEVLKKKRGELPATTSTSVDVMDKLCKFIYAKDDTDRIRTRAILAHIYHHAMHDNWFQARDLVLMSHLQDNIDAADPATRILYNRMMANLGLCAFRQGNVKDAHHCLVDLMVTGKPKELLAQGLLPQRQHERSAEQEKIEKQRQMPFHMHINLELLECVYLVSAML 658
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_DROME (Eukaryotic translation initiation factor 3 subunit C OS=Drosophila melanogaster GN=eIF3-S8 PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 3.427e-40 Identity = 86/166 (51.81%), Postives = 112/166 (67.47%), Query Frame = -1 Query: 1 PELVPRK----PTFPENSRTMMDMLVSLIYKYGD-ERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 483 PE++ +K P S +MD L IY D +R + RA+L IYHHA+ D + ARDL+LMSHLQDN+ D ++IL+NR MA LGLCAFR G + H CL +L GK KELLAQG+ R HE++ EQE++E++RQMP+HMHINLELLE V+L A+L Sbjct: 493 PEVLKKKRGELPATTSTSVDVMDKLCKFIYAKDDTDRIRTRAILAHIYHHAMHDNWFQARDLVLMSHLQDNIDAADPATRILYNRMMANLGLCAFRQGNVKDAHHCLVDLMVTGKPKELLAQGLLPQRQHERSAEQEKIEKQRQMPFHMHINLELLECVYLVSAML 658
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_BOMMO (Eukaryotic translation initiation factor 3 subunit C OS=Bombyx mori GN=eIF3-S8 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 4.476e-40 Identity = 85/155 (54.84%), Postives = 107/155 (69.03%), Query Frame = -1 Query: 1 PTFPENSRTMMDMLVSLIYKYGD-ERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 462 P E + M+ IY + + +R + RA+L IYHHAL D + ARDLLLMSHLQ+ VQ D +QIL+NR MA LGLCAFR G E H CL+EL GK KELLAQG+ R HE++ EQE++E++RQMP+HMHINLELLE V+L A+L Sbjct: 497 PPTEETTIKKMERYCKYIYAHDETDRLRTRAILSHIYHHALHDNWFQARDLLLMSHLQETVQHSDPSTQILYNRTMANLGLCAFRRGNVKEAHGCLAELMMTGKPKELLAQGLLPQRQHERSKEQEKIEKQRQMPFHMHINLELLECVYLVSAML 651
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_DROAN (Eukaryotic translation initiation factor 3 subunit C OS=Drosophila ananassae GN=eIF3-S8 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 9.971e-40 Identity = 86/166 (51.81%), Postives = 115/166 (69.28%), Query Frame = -1 Query: 1 PELVPRKP-TFPENSRT---MMDMLVSLIYKYGD-ERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 483 PE++ +K P+N++T +MD L IY D +R + RA+L IYHHA+ D + ARDL+LMSHLQDN+ D ++IL+NR MA LGLCAFR + H CL +L GK KELLAQG+ R HE++ EQE++E++RQMP+HMHINLELLE V+L A+L Sbjct: 495 PEVLKKKRGEIPQNTQTSVDVMDRLCKFIYAKDDTDRIRTRAILAHIYHHAMHDNWFQARDLVLMSHLQDNIDAADPATRILYNRMMANLGLCAFRQENIKDAHHCLVDLMVTGKPKELLAQGLLPQRQHERSAEQEKIEKQRQMPFHMHINLELLECVYLVSAML 660
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_DROWI (Eukaryotic translation initiation factor 3 subunit C OS=Drosophila willistoni GN=eIF3-S8 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.221e-39 Identity = 85/166 (51.20%), Postives = 111/166 (66.87%), Query Frame = -1 Query: 1 PELVPRK----PTFPENSRTMMDMLVSLIYKYGD-ERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 483 PE+ +K P + S +MD L IY D +R + RA+L IYHHA+ D + ARDL+LMSHLQDN+ D ++IL+NR MA LGLCAFR + H CL +L GK KELLAQG+ R HE++ EQE++E++RQMP+HMHINLELLE V+L A+L Sbjct: 494 PEVFKKKRGDIPNTTQTSVDIMDRLCKFIYAKDDTDRIRTRAILTHIYHHAMHDNWFQARDLILMSHLQDNIDAADPSTRILYNRMMANLGLCAFRQENVKDAHHCLVDLMVTGKAKELLAQGLLPQRQHERSAEQEKIEKQRQMPFHMHINLELLECVYLVSAML 659
BLAST of CX046616 vs. ExPASy Swiss-Prot
Match: EIF3C_PHANO (Eukaryotic translation initiation factor 3 subunit C OS=Phaeosphaeria nodorum GN=NIP1 PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 2.901e-39 Identity = 78/160 (48.75%), Postives = 112/160 (70.00%), Query Frame = -1 Query: 1 ELVPRKPTFPENSRTMMDMLVSLIYKYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDNVQQMDVLSQILFNRAMAQLGLCAFRVGMNAEGHSCLSELYSGGKVKELLAQGISQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLNCAIL 480 E+ PR ++ +++ L + +++ + +ARAMLC IY AL D++ ARD++LMSHLQ+ + DV +QILFNRA+ Q+GLCAFR G+ E + L E+ + KELLAQG+ RY + +PEQERLER+RQ+P+HMHINLELLE V+L C++L Sbjct: 461 EVTPR--AISNDTTSLVQTLSTYLFQNSEGIIRARAMLCQIYFLALHDQYYKARDMMLMSHLQETISNFDVNTQILFNRALVQVGLCAFRAGLVYESQNSLQEICGSNRQKELLAQGLQMQRYSQISPEQERLERQRQLPFHMHINLELLECVYLTCSML 618 The following BLAST results are available for this feature:
BLAST of CX046616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046616 ID=CX046616; Name=CX046616; organism=Citrus sinensis; type=EST; length=510bpback to top |